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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1225928..1230539+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000569-T2 ID=KJC3_000569-T2|Name=KJC3_000569-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4612bp|location=Sequence derived from alignment at ch1:1225928..1230539+ (Aspergillus niger KJC3)
TGCTCGCTGACCGATGTCTGAGCGCCACTTCATTATACTGGTGGTTAGGT
GTCCACTATTCTCCTCCTGCCCTCCTGGTCGTGCTCATGAAGCAGCTTGG
GTTGAAAGCCATGTGTCTCCATGGGCTCAGCTGGTGAGCACTAGTAGCTC
TTCAGACACATACAACCCAGTGTATCTTATTCGAAACCTGCTGAAAGATG
AGTGGGCATTTGACTTTGGATTATTTATAAGTTAAGACCTCGTCCGTGTC
TAGCCCTCTGGGGGTGTCTGTGATCCATCCACTCAGATTCGTCACGGTTT
CAACTCTTCCGGCCAAGGCAGTGATTCGACTACTCCCAGGTGGCAACCAC
GCCTTGGGCACCCGAAGCAGCGTCTGATACAAAACTTCCCCTTCCCCCTA
CTCTCTTTGAGATCACCATCCCCTGCCCTGCCACCCCCGATGTCAGGCAC
AGACGCCCCGATCTTTTAAACCCGAATTGTCAATTCCTTTTTCATATTAT
TCCGCGAACTCTCGTCTGCTACACAAAGCCAAGGATAGATCGCGCACATC
CACTCTTTTCATATGACCATCGTGGTGCTTGGAGCTCCGTGATTGGTCCT
GTCTGTCTCTAACCCGTGTTCACATTTCCCAGATTCGGCTGCTTTCCTCC
AGCGGAGCACTTCTCTTGAGCTCGTTCTCTTATCTCTCTCTCTCCATCAT
CACCTGCCGGCTCCCTACATCCTCGTCTCTCAGATAGGAGACCGAGTATA
AGCTCCCCTCCTTCTCGCAACCTCCCTCCCTCCGTGTCCCTCCCCGCTCC
TCTTCCCTCCTATCCGACAGAGGAATTCTTTCTTTTTCAAGTTGTATCAA
CATCGGGTTATGTATCAGTGACGTACTTTCATTCCTTGTGGCGGGCCCTT
TATCCCTTTCAACCTACCTCTGTGACTCCTCTGTCTTCCGAGTTCACGCC
TGTGAAAAGAAAAAGAAAATATCACCATTCTTATCTGTGTCTGTCATTCC
TTGACCTTGGCTTAAAAATTTGTGAGGTGCGTTTTGGGACTGGCCACATC
TCATGATACTGATGCAGGTTACATATTGACGCGGTTGCTAGGCTGCTGGA
ACAAGTTTCGCACATCAAGACCCCTTGAACAACGTTAGGCTCAAAACTCG
AGTGTCCTCCCTCTTCTTACCGTGTTGAGTTTGTTCAGGGATTTCTAAGA
AGTTTGGAAGGGAGAAAAGAAAGATTAAAAAAACAGCTATCATATCTGGG
CGAGAACATACGCAGAGGTAACACAAAACGGACTGCAGATTCCGTGAGTT
GAGACCAAGCTTCCGCCAGTCACGTAAAGCAATCAAGAATGGCTGGCGGC
TATTTTGATCTGCCCATCTCCTCCTCCTCCAGGCGTTCGAGCCTTACTGA
TGTATCTGGAGGAGCAAGCAGATCATCCCCAGGGCCGCGTGTCCTGACCC
CCCTACCGACCCCCAATGAGAGCCTACAGGAGAGGTTGCCGGACCCAAGC
GGAGCTCAGGGCAGGTTGAGGAATGCAGCAATCCCCAGGAGCGCGAATCG
GGTCAAGTTCACGGTCAGCGAGGCTGGTCTTGGCACCAGTCCCTCTGGGT
CGACGTCAGTGACCCGGTTTGCTGGAAGGGGCTCGTCACTACCGCAAAGA
CCATTGCCCACTGCCAGCATTCCATCAGCAGTTAAGGCTTCCCCTGACCC
CCAATCAGTGCCTTTGGTCGATATCAGCCCCAGTTCACCAGTAGGTGTCA
CGGGCCTAACGGTCCACTCAGCATCCAGTTCCACGGGTGCCACTGGCGAT
GATGATGAAGTCAGTAATGAGAAGGGGAGGGCGATTTATTCAGCACAAGA
GAGAGCCCAGCGGCTGGCATCCGTGCTGCACCAATCCTCTAAAACTCCGA
AGACCAGTCCTTGGCCTAGTCGACCGTCCTCCATCGCATCTACTCCTTCA
GAGGCGGCGCTACCCTTTGAGGATGGAGATGAGATTCCCATGATAAGTCT
TTCCGAAAAGCAATTTGGCGATTTTTCAGACGACGATGACCTGGGCCCAT
TGAACGGCCGACAATCGATCCGAACTTCTCAAGCCCACCAACTAGTCAGA
CAAATGACTCGAAACGATTTTGATTTTTTGAGCCGGCTCCAAGCCCCCTC
GGTAGGGCTGGAGTCCGGACAAGTCACTCCCATTGAAGAAAGGGACTCTG
ACGCCTATGTCGAACGACCGACGCACTACCGCGGCGGCATCCTCTCCTCT
TTACTCAAACTTTACGATCAACCCGGTGGCCACTATTCGCGGGGCCGGAA
TGCCAGCTTGCGCCGGAGCAGCACGGGAGAGTTCAGTGGTCGAGGGTTAT
CCCCGGACCCTACCTGGAAGTCTCAACGGCCCAGGAAGTGGTATGAAAAA
TCCCCCAACCAGTCGAGCACTTCGCTGGCTGGCTCAACGGCCAAGAATTC
TACGACCTCTCCAATTGCGATGCTTAAGCGCTCGCGTAGCAGTGGAGCCA
TTCCAAACGTACCAAAGCGGATGGGCAAGCCGCAGCTCGAGGATGAAATT
CGTATCACGGTCCAGATAGCCGAGCTTCTCTCCCGACAGGGATATCTCAT
CCGGCTTTGCCGGGCTTTGATGAAGTACGGTGCTCCCACCCACCGACTAG
AGGAATATATGAAGATGACTGCCCGCGTCTTGGAAGTTGATGGCCAATTT
CTCTATATACCTGGCTGCATGATCATCTCCTTTGACGATGCTTCTACCCA
CACCACCGAGGTCAGATTAGTCCGAAGCCCCCAAGGGGTTGATCTGGGCC
GACTCTGCGATGTGCATCTCATTTACAAGGAGGTGATTCACGGCGTGATT
GGGGTCGAAGAGGCCATTCAACGGCTGGACGAGATCCTGAAGCAGAAGAA
CAAGTACCCGGTACCAGTTGTTATTCTTATCTATGGATGTGCCAGCGCCT
GCGTCGGTCCTTTCGCATTCAACGCACGACCCATCGATATGCCGATTGCC
TTCTTGCTCGGATGTCTTCTGGGGACCCTTCAACTCGTACTTTCGCCGCG
TTCCAATCTTTACGCCAATGTCTTTGAGATCTCCGCAGCAGTCCTAACCT
CGTTCTTGGCCCGGGCTTTTGGCAGCATTCGCTATGGAGATGGGCGGCTC
TTCTGCTTTTCTGCTTTGGCTCAATCTTCGATTGCACTGATCCTGCCTGG
ATACATGGTGTTGTGCGCCAGTCTGGAGTTGCAGTCGCGCAGTATTGTTG
CCGGATCTGTCCGCATGGTCTACGCTATCATCTACTCCCTCTTCCTCGGG
TTCGGCATCACTATCGGAACCGCAGTGTACGGACTATTAGATGGTGATGC
CTCCTCGGACTATACATGTCCGCCAAGTCCCATCACCAATGAATATCTCC
AGCATTTTCCCTTTGCGATCCTCTTCACCTTCTGCCTCGCAGTCATCAAC
CAAGCGAAGTGGAAGCAGATTCCTATGATGTTGATTATCTCATTTGCGGG
ATACGTGACGAATTACTTTGGCACCAAGCGGTTTTATTCGAGCACTCAGA
TATCCAATGCATTGGGCGCGTTCGTCATCGGGGTCATGGGGAACCTTTAC
AGTCGGCTACGACACGGCTTCGCGGCCGCTGCGATGTTGCCCGCCATCTT
TGTTCTGGTTCCGTCTGGTCTTGCTGCTAGTGGGTCACTCATTTCGGGCA
TTGCGGCAGCGGAACAAATCACTACGTCGACGTCTCCTTTCGCAGTTGTC
TCTAACGGGACACAAGGCTTCGTGGATGCGGCAAAGAATCTATCGAGCCC
GGACTTTGACCGCGAGTTCCACGGCGTGGTTCTCGACATCGGTTATGGAA
TGATCCAGGTAGCAGTCGGCTTCACGGTGGGCCTGTTCCTGGCTGCCTTG
GTTGTTTATCCGCTCGGAAAGAAGCGAAGTGGACTTTTCAGCTTTTAGAT
AACTTGCCTCGATTGTCTCTTCTTTCCTTACACTTGCAACTTGACTGTCT
TCTGTGTTATTTTTGACGAAGCGAATTGTCGTGTTATTCAGCGTGATTTA
TCTCCATCCTTTCACTTGATCTGTGTTTCTTTTTGGTGTCAGTGTCCTTC
TCTTCTCGGGTTTTCCTTTCTTGTTGGGCTCGCTCTTGCTATTTATGCAT
ATATATCCGTCATCTCTTATCCGGTTACTCTCCTTGTTTGTTTGGGTCTG
ATTCGTTTGATGCGATTGCAAGCGCTCCCAGGGTATCTTTGCTGTTTTTT
GTCATCCACACAGGCGTGTGTTGATTCTTTTCTCCTGTTTTGTACCATTC
ATTCATTCCTTTTCTTTCTCTTCGTCCCTTTTCTGCGTCTACAAAAGCAA
AGCAACGGCGGTTCGGGTCATATGTTACAACGTCTTTGGTGGGATTCTAA
TTCCTTGTGCTGATCTGCTCCTGATACATGGAAGTTGAGTTGATCGTTAT
ATTATACTGCGTTATTACTTACATCTACTGCCACCACCAAGCTAGCCCTG
CGACGGCTTATCACTAGATAGAAGATACGATACCACGAATAATGATCAAC
TACGAACAATACCTCGCATAGAAACCACACTCATCGGTACAACTCTTAGA
TCTATCCCTTCC back to topCoding sequence (CDS) from alignment at ch1:1225928..1230539+ >KJC3_000569-T2 ID=KJC3_000569-T2|Name=KJC3_000569-T2|organism=Aspergillus niger KJC3|type=CDS|length=2610bp|location=Sequence derived from alignment at ch1:1225928..1230539+ (Aspergillus niger KJC3)
ATGGCTGGCGGCTATTTTGATCTGCCCATCTCCTCCTCCTCCAGGCGTTC
GAGCCTTACTGATGTATCTGGAGGAGCAAGCAGATCATCCCCAGGGCCGC
GTGTCCTGACCCCCCTACCGACCCCCAATGAGAGCCTACAGGAGAGGTTG
CCGGACCCAAGCGGAGCTCAGGGCAGGTTGAGGAATGCAGCAATCCCCAG
GAGCGCGAATCGGGTCAAGTTCACGGTCAGCGAGGCTGGTCTTGGCACCA
GTCCCTCTGGGTCGACGTCAGTGACCCGGTTTGCTGGAAGGGGCTCGTCA
CTACCGCAAAGACCATTGCCCACTGCCAGCATTCCATCAGCAGTTAAGGC
TTCCCCTGACCCCCAATCAGTGCCTTTGGTCGATATCAGCCCCAGTTCAC
CAGTAGGTGTCACGGGCCTAACGGTCCACTCAGCATCCAGTTCCACGGGT
GCCACTGGCGATGATGATGAAGTCAGTAATGAGAAGGGGAGGGCGATTTA
TTCAGCACAAGAGAGAGCCCAGCGGCTGGCATCCGTGCTGCACCAATCCT
CTAAAACTCCGAAGACCAGTCCTTGGCCTAGTCGACCGTCCTCCATCGCA
TCTACTCCTTCAGAGGCGGCGCTACCCTTTGAGGATGGAGATGAGATTCC
CATGATAAGTCTTTCCGAAAAGCAATTTGGCGATTTTTCAGACGACGATG
ACCTGGGCCCATTGAACGGCCGACAATCGATCCGAACTTCTCAAGCCCAC
CAACTAGTCAGACAAATGACTCGAAACGATTTTGATTTTTTGAGCCGGCT
CCAAGCCCCCTCGGTAGGGCTGGAGTCCGGACAAGTCACTCCCATTGAAG
AAAGGGACTCTGACGCCTATGTCGAACGACCGACGCACTACCGCGGCGGC
ATCCTCTCCTCTTTACTCAAACTTTACGATCAACCCGGTGGCCACTATTC
GCGGGGCCGGAATGCCAGCTTGCGCCGGAGCAGCACGGGAGAGTTCAGTG
GTCGAGGGTTATCCCCGGACCCTACCTGGAAGTCTCAACGGCCCAGGAAG
TGGTATGAAAAATCCCCCAACCAGTCGAGCACTTCGCTGGCTGGCTCAAC
GGCCAAGAATTCTACGACCTCTCCAATTGCGATGCTTAAGCGCTCGCGTA
GCAGTGGAGCCATTCCAAACGTACCAAAGCGGATGGGCAAGCCGCAGCTC
GAGGATGAAATTCGTATCACGGTCCAGATAGCCGAGCTTCTCTCCCGACA
GGGATATCTCATCCGGCTTTGCCGGGCTTTGATGAAGTACGGTGCTCCCA
CCCACCGACTAGAGGAATATATGAAGATGACTGCCCGCGTCTTGGAAGTT
GATGGCCAATTTCTCTATATACCTGGCTGCATGATCATCTCCTTTGACGA
TGCTTCTACCCACACCACCGAGGTCAGATTAGTCCGAAGCCCCCAAGGGG
TTGATCTGGGCCGACTCTGCGATGTGCATCTCATTTACAAGGAGGTGATT
CACGGCGTGATTGGGGTCGAAGAGGCCATTCAACGGCTGGACGAGATCCT
GAAGCAGAAGAACAAGTACCCGGTACCAGTTGTTATTCTTATCTATGGAT
GTGCCAGCGCCTGCGTCGGTCCTTTCGCATTCAACGCACGACCCATCGAT
ATGCCGATTGCCTTCTTGCTCGGATGTCTTCTGGGGACCCTTCAACTCGT
ACTTTCGCCGCGTTCCAATCTTTACGCCAATGTCTTTGAGATCTCCGCAG
CAGTCCTAACCTCGTTCTTGGCCCGGGCTTTTGGCAGCATTCGCTATGGA
GATGGGCGGCTCTTCTGCTTTTCTGCTTTGGCTCAATCTTCGATTGCACT
GATCCTGCCTGGATACATGGTGTTGTGCGCCAGTCTGGAGTTGCAGTCGC
GCAGTATTGTTGCCGGATCTGTCCGCATGGTCTACGCTATCATCTACTCC
CTCTTCCTCGGGTTCGGCATCACTATCGGAACCGCAGTGTACGGACTATT
AGATGGTGATGCCTCCTCGGACTATACATGTCCGCCAAGTCCCATCACCA
ATGAATATCTCCAGCATTTTCCCTTTGCGATCCTCTTCACCTTCTGCCTC
GCAGTCATCAACCAAGCGAAGTGGAAGCAGATTCCTATGATGTTGATTAT
CTCATTTGCGGGATACGTGACGAATTACTTTGGCACCAAGCGGTTTTATT
CGAGCACTCAGATATCCAATGCATTGGGCGCGTTCGTCATCGGGGTCATG
GGGAACCTTTACAGTCGGCTACGACACGGCTTCGCGGCCGCTGCGATGTT
GCCCGCCATCTTTGTTCTGGTTCCGTCTGGTCTTGCTGCTAGTGGGTCAC
TCATTTCGGGCATTGCGGCAGCGGAACAAATCACTACGTCGACGTCTCCT
TTCGCAGTTGTCTCTAACGGGACACAAGGCTTCGTGGATGCGGCAAAGAA
TCTATCGAGCCCGGACTTTGACCGCGAGTTCCACGGCGTGGTTCTCGACA
TCGGTTATGGAATGATCCAGGTAGCAGTCGGCTTCACGGTGGGCCTGTTC
CTGGCTGCCTTGGTTGTTTATCCGCTCGGAAAGAAGCGAAGTGGACTTTT
CAGCTTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000569-T2.utr3p1 | KJC3_000569-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010619 |
| DBxref | InterPro:IPR024528 |
| DBxref | PFAM:PF12821 |
| DBxref | PFAM:PF06738 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1225928..1230539 + |
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