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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1243372..1245272+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000573-T2 ID=KJC3_000573-T2|Name=KJC3_000573-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1901bp|location=Sequence derived from alignment at ch1:1243372..1245272+ (Aspergillus niger KJC3)
CGGCGTCCTTCTAAATAAATAAAAAAAAAGGCTTGGTGCTTGTGACAAAG
GACGAATCGGAGAGCTTTATTGCCCGTGATGTATCGTCCTTGATTGATGT
GTCATGAGCCCCGACTTCCCAAATTTGGTTGTGATATAGTCTTAAAGGGG
ACTTAAGCCCAGACTGCTGGGACGTTAAATAAATTCCAGCACCTTGGAAG
CGCTTTCGTGAAGCCCTACCCGTTCGTCACGATGCTCGCAGAGCTGCTTG
GACGTGATGACACCGGCACAACAGATGGGCATGTTGACAGGTCGGTCCAG
AAATGGAATGAGGCGACACAGATATTATGCATCACTACAATGACGATTTT
CTTTGCTCTGCGATGTTTTACTCGCCTTGTCATTATGGACGGCTTTAGGA
GAGAGGATTGTAAGGGCCTGGTGATCAGCTCCAGATGGCCAGTGCTAACC
GACTCACAGGGACATGTCTAGGTGCCTGGGTAAGGACATTGATGCCAACC
TACTGGGAAAAGACGCTCATCTATTTTATTGGCAGTTTCTTGGTGTGTGT
TATTCGGTCATTGCTTTGATCAGTAAGTATAAACACAAGCCTTGTTCGGA
GATTTGCTGAGTATTAATCCAGTGGGACACTTTGGGGGCGGGGTGCACTA
CGCGGATGTGCCTGTATCCCATCGCATACCCTTCGAAAAGGTATGATGAT
TATGTCTCTTACAGTCCCCAATTTGCTGTGTTAACTCGCTCAGACGGTGT
ATGTGACAATGGTCATGTATGGCCCGACCGCATATCTGACAAAGTTGTCC
CTACTTTGGATCATTGCCCGAGTCTTCAGCCCTTATCGCAAAACCGTTAT
ATTCATCTACGTATTCTTGGGTGTTATGCTAGCCTACTATATTCCAGCGG
TCATCGTCAAGATCCGGATCTGCGACCCAATAGCGAAGTTCTGGGCCCCC
GACACATTGGGGTCATGTCTGGACCAGACATCAATCATTCTTGCCGATGC
GGTTGTCAGTGTCGTTAGCGATATGACTATCCTCATTCTTCCCCTACCTT
TGACGGTAGGGTTGCAATTGCCGATGAAGAAGAAATTGCGAGTCATGGTC
GTATTGGGAGCCGGCGGACTAGCATGTGCATCGAGTATTGTCCGTCTGAT
CCTCATTATTTTGACGGGGCAATCGCAGGACGGGACACTGGCTTTCATGC
GCATTAACATGTTTGGGTATGGCTGCTCTCTAAGCATGATATCACTGTAT
CACCTAGCTGACATTTCTTTCGTCTACAGGAACGCCGAGATAACGATTGG
GGTCATTTGTGCCTGCTTGCCCGCCCTTTCAGCCCTGGTCTCCCGTACCC
ACCGCGAATATACGAGCAACAAATACTCGAGTCATAAGAACACCCAGGCA
TCACAGTACGAGTTGAACAAGGTCAAGAATAGTCGTCCCAGTCGCACAGA
TAGGAGCAAAAACCAGATGACCCTGACGGAGGTCGGATCGGACCAGGACA
TTCTCATCCCCAACGCTCAGGAAGCGCCAAGGATCGAGACCACGGTCCGT
GGCGATTCAGAGCGGCAAGGCACAGAAACCATGGGGATCATGAGAACTGT
CGACGTATCAACTACTGTGACCTCGCGGTACAATGAAAACGAATGACAGG
TAAAAGTCTTTTGGCGGTATGGCGGCGTTCCGGGGGATATCATTATGCTG
TGCCTTAACCGGCTCACATCTCGACGAATCGACATGGTTTTCTTAACGTA
TCTATAATAATATAGTGTATCATATGCTTTCCGGACCTCATAACGGCCTC
GATGTCGATTTATGTCTGTATATATTTTGACGCCAGGAAGCAATATGATG
GCTGTTGACTTGCTGGAGCAATGTGATAAGTATCATAATGCACTACTCGA
G back to topCoding sequence (CDS) from alignment at ch1:1243372..1245272+ >KJC3_000573-T2 ID=KJC3_000573-T2|Name=KJC3_000573-T2|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch1:1243372..1245272+ (Aspergillus niger KJC3)
ATGTCTAGGTGCCTGGGTAAGGACATTGATGCCAACCTACTGGGAAAAGA
CGCTCATCTATTTTATTGGCAGTTTCTTGGTGTGTGTTATTCGGTCATTG
CTTTGATCATGGGACACTTTGGGGGCGGGGTGCACTACGCGGATGTGCCT
GTATCCCATCGCATACCCTTCGAAAAGACGGTGTATGTGACAATGGTCAT
GTATGGCCCGACCGCATATCTGACAAAGTTGTCCCTACTTTGGATCATTG
CCCGAGTCTTCAGCCCTTATCGCAAAACCGTTATATTCATCTACGTATTC
TTGGGTGTTATGCTAGCCTACTATATTCCAGCGGTCATCGTCAAGATCCG
GATCTGCGACCCAATAGCGAAGTTCTGGGCCCCCGACACATTGGGGTCAT
GTCTGGACCAGACATCAATCATTCTTGCCGATGCGGTTGTCAGTGTCGTT
AGCGATATGACTATCCTCATTCTTCCCCTACCTTTGACGGTAGGGTTGCA
ATTGCCGATGAAGAAGAAATTGCGAGTCATGGTCGTATTGGGAGCCGGCG
GACTAGCATGTGCATCGAGTATTGTCCGTCTGATCCTCATTATTTTGACG
GGGCAATCGCAGGACGGGACACTGGCTTTCATGCGCATTAACATGTTTGG
GAACGCCGAGATAACGATTGGGGTCATTTGTGCCTGCTTGCCCGCCCTTT
CAGCCCTGGTCTCCCGTACCCACCGCGAATATACGAGCAACAAATACTCG
AGTCATAAGAACACCCAGGCATCACAGTACGAGTTGAACAAGGTCAAGAA
TAGTCGTCCCAGTCGCACAGATAGGAGCAAAAACCAGATGACCCTGACGG
AGGTCGGATCGGACCAGGACATTCTCATCCCCAACGCTCAGGAAGCGCCA
AGGATCGAGACCACGGTCCGTGGCGATTCAGAGCGGCAAGGCACAGAAAC
CATGGGGATCATGAGAACTGTCGACGTATCAACTACTGTGACCTCGCGGT
ACAATGAAAACGAATGAATGTCTAGGTGCCTGGGTAAGGACATTGATGCC
AACCTACTGGGAAAAGACGCTCATCTATTTTATTGGCAGTTTCTTGGTGT
GTGTTATTCGGTCATTGCTTTGATCATGGGACACTTTGGGGGCGGGGTGC
ACTACGCGGATGTGCCTGTATCCCATCGCATACCCTTCGAAAAGACGGTG
TATGTGACAATGGTCATGTATGGCCCGACCGCATATCTGACAAAGTTGTC
CCTACTTTGGATCATTGCCCGAGTCTTCAGCCCTTATCGCAAAACCGTTA
TATTCATCTACGTATTCTTGGGTGTTATGCTAGCCTACTATATTCCAGCG
GTCATCGTCAAGATCCGGATCTGCGACCCAATAGCGAAGTTCTGGGCCCC
CGACACATTGGGGTCATGTCTGGACCAGACATCAATCATTCTTGCCGATG
CGGTTGTCAGTGTCGTTAGCGATATGACTATCCTCATTCTTCCCCTACCT
TTGACGGTAGGGTTGCAATTGCCGATGAAGAAGAAATTGCGAGTCATGGT
CGTATTGGGAGCCGGCGGACTAGCATGTGCATCGAGTATTGTCCGTCTGA
TCCTCATTATTTTGACGGGGCAATCGCAGGACGGGACACTGGCTTTCATG
CGCATTAACATGTTTGGGAACGCCGAGATAACGATTGGGGTCATTTGTGC
CTGCTTGCCCGCCCTTTCAGCCCTGGTCTCCCGTACCCACCGCGAATATA
CGAGCAACAAATACTCGAGTCATAAGAACACCCAGGCATCACAGTACGAG
TTGAACAAGGTCAAGAATAGTCGTCCCAGTCGCACAGATAGGAGCAAAAA
CCAGATGACCCTGACGGAGGTCGGATCGGACCAGGACATTCTCATCCCCA
ACGCTCAGGAAGCGCCAAGGATCGAGACCACGGTCCGTGGCGATTCAGAG
CGGCAAGGCACAGAAACCATGGGGATCATGAGAACTGTCGACGTATCAAC
TACTGTGACCTCGCGGTACAATGAAAACGAATGAATGTCTAGGTGCCTGG
GTAAGGACATTGATGCCAACCTACTGGGAAAAGACGCTCATCTATTTTAT
TGGCAGTTTCTTGGTGTGTGTTATTCGGTCATTGCTTTGATCATGGGACA
CTTTGGGGGCGGGGTGCACTACGCGGATGTGCCTGTATCCCATCGCATAC
CCTTCGAAAAGACGGTGTATGTGACAATGGTCATGTATGGCCCGACCGCA
TATCTGACAAAGTTGTCCCTACTTTGGATCATTGCCCGAGTCTTCAGCCC
TTATCGCAAAACCGTTATATTCATCTACGTATTCTTGGGTGTTATGCTAG
CCTACTATATTCCAGCGGTCATCGTCAAGATCCGGATCTGCGACCCAATA
GCGAAGTTCTGGGCCCCCGACACATTGGGGTCATGTCTGGACCAGACATC
AATCATTCTTGCCGATGCGGTTGTCAGTGTCGTTAGCGATATGACTATCC
TCATTCTTCCCCTACCTTTGACGGTAGGGTTGCAATTGCCGATGAAGAAG
AAATTGCGAGTCATGGTCGTATTGGGAGCCGGCGGACTAGCATGTGCATC
GAGTATTGTCCGTCTGATCCTCATTATTTTGACGGGGCAATCGCAGGACG
GGACACTGGCTTTCATGCGCATTAACATGTTTGGGAACGCCGAGATAACG
ATTGGGGTCATTTGTGCCTGCTTGCCCGCCCTTTCAGCCCTGGTCTCCCG
TACCCACCGCGAATATACGAGCAACAAATACTCGAGTCATAAGAACACCC
AGGCATCACAGTACGAGTTGAACAAGGTCAAGAATAGTCGTCCCAGTCGC
ACAGATAGGAGCAAAAACCAGATGACCCTGACGGAGGTCGGATCGGACCA
GGACATTCTCATCCCCAACGCTCAGGAAGCGCCAAGGATCGAGACCACGG
TCCGTGGCGATTCAGAGCGGCAAGGCACAGAAACCATGGGGATCATGAGA
ACTGTCGACGTATCAACTACTGTGACCTCGCGGTACAATGAAAACGAATG
AATGTCTAGGTGCCTGGGTAAGGACATTGATGCCAACCTACTGGGAAAAG
ACGCTCATCTATTTTATTGGCAGTTTCTTGGTGTGTGTTATTCGGTCATT
GCTTTGATCATGGGACACTTTGGGGGCGGGGTGCACTACGCGGATGTGCC
TGTATCCCATCGCATACCCTTCGAAAAGACGGTGTATGTGACAATGGTCA
TGTATGGCCCGACCGCATATCTGACAAAGTTGTCCCTACTTTGGATCATT
GCCCGAGTCTTCAGCCCTTATCGCAAAACCGTTATATTCATCTACGTATT
CTTGGGTGTTATGCTAGCCTACTATATTCCAGCGGTCATCGTCAAGATCC
GGATCTGCGACCCAATAGCGAAGTTCTGGGCCCCCGACACATTGGGGTCA
TGTCTGGACCAGACATCAATCATTCTTGCCGATGCGGTTGTCAGTGTCGT
TAGCGATATGACTATCCTCATTCTTCCCCTACCTTTGACGGTAGGGTTGC
AATTGCCGATGAAGAAGAAATTGCGAGTCATGGTCGTATTGGGAGCCGGC
GGACTAGCATGTGCATCGAGTATTGTCCGTCTGATCCTCATTATTTTGAC
GGGGCAATCGCAGGACGGGACACTGGCTTTCATGCGCATTAACATGTTTG
GGAACGCCGAGATAACGATTGGGGTCATTTGTGCCTGCTTGCCCGCCCTT
TCAGCCCTGGTCTCCCGTACCCACCGCGAATATACGAGCAACAAATACTC
GAGTCATAAGAACACCCAGGCATCACAGTACGAGTTGAACAAGGTCAAGA
ATAGTCGTCCCAGTCGCACAGATAGGAGCAAAAACCAGATGACCCTGACG
GAGGTCGGATCGGACCAGGACATTCTCATCCCCAACGCTCAGGAAGCGCC
AAGGATCGAGACCACGGTCCGTGGCGATTCAGAGCGGCAAGGCACAGAAA
CCATGGGGATCATGAGAACTGTCGACGTATCAACTACTGTGACCTCGCGG
TACAATGAAAACGAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000573-T2.utr5p1 | KJC3_000573-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000573-T2.utr3p1 | KJC3_000573-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1243372..1245272 + |
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