You are here

Home

KJC3_000592-T2, KJC3_000592-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000592-T2
Unique NameKJC3_000592-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1299798..1302912+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000592-T2 ID=KJC3_000592-T2|Name=KJC3_000592-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3115bp|location=Sequence derived from alignment at ch1:1299798..1302912+ (Aspergillus niger KJC3)
CCAAGAACGTGGCATACAATCAGTTACTAAGAAGTGTTTGAAGATCCAGC
TGTCACCTGAAGTATGTGGCTTTCTGTATATCAATGTTGGGTTTTTGCTG
TCGCGCCCCCACACACCACACAAGACTCGAGGCAAAAGCGGTATGGCAAG
TTCTGGAAACGGAAGCCGTTTTCTGACGGGGACCAAAAGTGGGACGCACT
ACTCTCTATTCTAGTATCGATTAGCTTTCCCACTGACGGGCATCTCTTTC
GGCTGACAGTTACAGACTCGCCCATCACTTGTGCATGAGAAAGTGTATTA
CTTGGTGTACCCATTGTGATAGCTGTTTTAGAGTTCAGCGATGAACCTGT
CCATGGAGCCAGCAACAGGAAAAGCACGAAATGGACAGCGCTGGGCTTGA
TAGCCAGCCGTGCCCGAGCAACTCTGGCACGCGCTGGGTCTTCGGATTCG
TCGGATAAGGATCCAGGAGCCAGACTGTGCAGCCGCTAATTCCTCCCCGG
AAGGAGGAATCGTGATCCCCCGTTCCATGACAGCCACTAGCCATCGCGTC
TGTTGTGCTATAGCCTATCGCGGCCGCATGTCCAATCGCCGGTTCACCAG
GTGGAGTAAACCATCCCCCAACCCGGGCTGGTTCTGCTTATCAAGCACCA
AGATAACCACCCCCAGCTTGCTTATATCGGGGTCGCCGCCAGTTCATCAT
CCTCTTCGCGACGATTCATGCAACGCCTCCCACATTAATTCCCACGGCAA
ACCGAGTATCACCCGGAGGGCTGTCTTGGGTGAACTGCTATCGCCTAACC
ACCATAATCATGGTTTACTCAACGCTGTCTCCTCCCCTGGACCTGTCACA
TCACTTCTCCTCGGTCACGAAGAGACGGGAGGCGAGCGAAACAAAGAGCC
TGTATAAGTACTTTTTCATCCCAGGCATTGCGAACTTGGCTGGTGGTGCG
TTTTTTCTCCTGCTTGCTAACTTCCTGGCTCTTGCTCGGGCATAACACGA
CGGTTGCACTTGTGCCACTTTGTTAACCTCTTGCGACATCAGGCCTGCCA
AATGCGTCATACTTCCCCTATGATACCCTCGAAGCTACCGTTGCTCATCC
TCAGCGTTTCCCCGCCACCTCCGACAATGACCAGATCAAGCCCCCCAGTG
GCTCCCCTTCAACGGAGCGCAGAATCGTCCCGAAAGAAAGCCCGACTACC
AATCTCCTGAAGAAAATTGATCTTACCACAGCCCTCCAGTATGGAACAGC
TGAAGGCCTCCCCGTTATGGCCGATTTCGTCCGGCAGTTCACTCGCAATC
ACCTCCACCCGAATGTCCCCTATGCCGGCGGCCCTGGCACCCTTCTCACG
TGCGGTGCCACCGACGGGTTTTCCAAGGCCATTGAAACCTTTACTAACCC
GTGGGACCCCCGTCGGGATTGGATCAGTCAACGTGAGGGCATACTATGCG
AGGAATTTGTGTACATGAACGCAATCCAAACCGTGAAGCCGCGGGGCCTT
AACATCGTTCCGGTAGCCATAGATGCGCAGGGCATGCTTGCGCATGGTAA
AGGAGGATTGGCCGACGTGCTTGAGAACTGGGATTTCAAGAAGGGCCGTC
TCCCGCATCTGATGTACACAATCACGTAAGTTCAAACCTCTGTAGCAACA
CTTTGCTGGCATGTTGGCTAATGTTGCCTTATCTGGTTGCAGTATCGGCC
AAAACCCGACGGGCGGGACCTTGTCGGTCGAGCGCAGGAGGGAGATCTAC
GCTCTCTGTCGACAATTTGACATCATCATCATAGAAGACGATCCGTACTG
GAACTTACAGTATCCTTCTGCAACTGCTATGGAGGCCGGATTTCGAGGAT
CAGATGCCGTAGATGTAATTCCACGCAACTACAACGCCCACGGCAGGTCC
TCCGGGTACGATTTTCTGGATTCCTTGGTGCCATCGTATCTCTCCGTTGA
TACGGACGGGCGTGTCGTGCGTCTTGACACCTTCTCAAAGACCATAGCTC
CTGGTTGTCGCTTAGGATGGATTACCGCTCAGCCAGCTATAATCGAACGC
CTGACTCGTCTCACCGAGACATCGACTCAGCAGCCATCAGGGTTTGTACA
GGCCATGGTGGCCGAACTGATTGTGGGTCAGCAATCCGAGGATGGCCAGA
ATGCCACAGGTGCAAGTAGGAATAAATCTAAAAAGAGCGAACAAGCCTGG
CAGATGGACGGCTGGGTTCGCTGGTTGGAAGGCCTCCGTGCGGGATACGA
ACAACGCATGACGACAATGTGTACAATTCTCGAAGAGGGCAAGTACCTCA
TTGACTCCGGTAGCGCATGGGACGATGTACAACCCATGGCAGAGGATGAC
ACTGCCTGGGAAGTCCTGGATAAGATGCAGATGTACGAGTTCTCCTGGCC
CACCGGCGGTATGTTTGTGTGGGTCAAGGTCTGCATCGAGACGCACCCCT
TGCTGGAGAAGTATGGCCCGGAGAAGCTGATCCAAGCTTTGTGGCTGCAT
TTGATGCAAAAGCCGTATTTGTGCCTTTCGGGTCCCGGAACCATGTTTGC
TCCTACAACGGAGCTTCTGGACCGGGCGCAGACATATTACAGGTTGTGCT
TTGCGGCGATGCCTGCGGAGGATGTGTTGGGCATTACTCGGAGGTTGGTA
GATGGATTTCGCGCGTTTTGGCAACGGAAGAATCTCGATGGCTTGGATGA
TGAGGAGGTTGCTCTTAGTAGGCTGCAGGCAAAGGGTTCAGGCAACTTGT
TGGGTTTGGGCTGCTAGACTGGGTTGCTTGAATATACCATGCAATCTACA
TTCGTTATCTTGGACAGCGATTATATACTATTTTGGTTGGCGCATAACTT
TCATAAATTGATTCACCTACGCACGACGGAAGTCGCCCTAGAGTCTATGA
AAAGAAACACAATCGTTATCTAGCATCAAAAGAGTATATATGTCATTTGA
TTTTATTTAATTTTTATATGCAATGGTCAATCACTGCTCCAAAAGAATCC
AAAAAGTGGCGCCGGCAAGGAATGCGGGGCGGGTTGCCCAAAAAAACAAA
AAGCGACCCCACTGGGACTCGAACCCAGAATCTTCAGTACCGAAAACTGA
CGCCCTACCATTGAG
back to top

Coding sequence (CDS) from alignment at ch1:1299798..1302912+

>KJC3_000592-T2 ID=KJC3_000592-T2|Name=KJC3_000592-T2|organism=Aspergillus niger KJC3|type=CDS|length=2868bp|location=Sequence derived from alignment at ch1:1299798..1302912+ (Aspergillus niger KJC3)
ATGGCCGATTTCGTCCGGCAGTTCACTCGCAATCACCTCCACCCGAATGT
CCCCTATGCCGGCGGCCCTGGCACCCTTCTCACGTGCGGTGCCACCGACG
GGTTTTCCAAGGCCATTGAAACCTTTACTAACCCGTGGGACCCCCGTCGG
GATTGGATCAGTCAACGTGAGGGCATACTATGCGAGGAATTTGTGTACAT
GAACGCAATCCAAACCGTGAAGCCGCGGGGCCTTAACATCGTTCCGGTAG
CCATAGATGCGCAGGGCATGCTTGCGCATGGTAAAGGAGGATTGGCCGAC
GTGCTTGAGAACTGGGATTTCAAGAAGGGCCGTCTCCCGCATCTGATGTA
CACAATCACTATCGGCCAAAACCCGACGGGCGGGACCTTGTCGGTCGAGC
GCAGGAGGGAGATCTACGCTCTCTGTCGACAATTTGACATCATCATCATA
GAAGACGATCCGTACTGGAACTTACAGTATCCTTCTGCAACTGCTATGGA
GGCCGGATTTCGAGGATCAGATGCCGTAGATGTAATTCCACGCAACTACA
ACGCCCACGGCAGGTCCTCCGGGTACGATTTTCTGGATTCCTTGGTGCCA
TCGTATCTCTCCGTTGATACGGACGGGCGTGTCGTGCGTCTTGACACCTT
CTCAAAGACCATAGCTCCTGGTTGTCGCTTAGGATGGATTACCGCTCAGC
CAGCTATAATCGAACGCCTGACTCGTCTCACCGAGACATCGACTCAGCAG
CCATCAGGGTTTGTACAGGCCATGGTGGCCGAACTGATTGTGGGTCAGCA
ATCCGAGGATGGCCAGAATGCCACAGGTGCAAGTAGGAATAAATCTAAAA
AGAGCGAACAAGCCTGGCAGATGGACGGCTGGGTTCGCTGGTTGGAAGGC
CTCCGTGCGGGATACGAACAACGCATGACGACAATGTGTACAATTCTCGA
AGAGGGCAAGTACCTCATTGACTCCGGTAGCGCATGGGACGATGTACAAC
CCATGGCAGAGGATGACACTGCCTGGGAAGTCCTGGATAAGATGCAGATG
TACGAGTTCTCCTGGCCCACCGGCGGTATGTTTGTGTGGGTCAAGGTCTG
CATCGAGACGCACCCCTTGCTGGAGAAGTATGGCCCGGAGAAGCTGATCC
AAGCTTTGTGGCTGCATTTGATGCAAAAGCCGTATTTGTGCCTTTCGGGT
CCCGGAACCATGTTTGCTCCTACAACGGAGCTTCTGGACCGGGCGCAGAC
ATATTACAGGTTGTGCTTTGCGGCGATGCCTGCGGAGGATGTGTTGGGCA
TTACTCGGAGGTTGGTAGATGGATTTCGCGCGTTTTGGCAACGGAAGAAT
CTCGATGGCTTGGATGATGAGGAGGTTGCTCTTAGTAGGCTGCAGGCAAA
GGGTTCAGGCAACTTGTTGGGTTTGGGCTGCTAGATGGCCGATTTCGTCC
GGCAGTTCACTCGCAATCACCTCCACCCGAATGTCCCCTATGCCGGCGGC
CCTGGCACCCTTCTCACGTGCGGTGCCACCGACGGGTTTTCCAAGGCCAT
TGAAACCTTTACTAACCCGTGGGACCCCCGTCGGGATTGGATCAGTCAAC
GTGAGGGCATACTATGCGAGGAATTTGTGTACATGAACGCAATCCAAACC
GTGAAGCCGCGGGGCCTTAACATCGTTCCGGTAGCCATAGATGCGCAGGG
CATGCTTGCGCATGGTAAAGGAGGATTGGCCGACGTGCTTGAGAACTGGG
ATTTCAAGAAGGGCCGTCTCCCGCATCTGATGTACACAATCACTATCGGC
CAAAACCCGACGGGCGGGACCTTGTCGGTCGAGCGCAGGAGGGAGATCTA
CGCTCTCTGTCGACAATTTGACATCATCATCATAGAAGACGATCCGTACT
GGAACTTACAGTATCCTTCTGCAACTGCTATGGAGGCCGGATTTCGAGGA
TCAGATGCCGTAGATGTAATTCCACGCAACTACAACGCCCACGGCAGGTC
CTCCGGGTACGATTTTCTGGATTCCTTGGTGCCATCGTATCTCTCCGTTG
ATACGGACGGGCGTGTCGTGCGTCTTGACACCTTCTCAAAGACCATAGCT
CCTGGTTGTCGCTTAGGATGGATTACCGCTCAGCCAGCTATAATCGAACG
CCTGACTCGTCTCACCGAGACATCGACTCAGCAGCCATCAGGGTTTGTAC
AGGCCATGGTGGCCGAACTGATTGTGGGTCAGCAATCCGAGGATGGCCAG
AATGCCACAGGTGCAAGTAGGAATAAATCTAAAAAGAGCGAACAAGCCTG
GCAGATGGACGGCTGGGTTCGCTGGTTGGAAGGCCTCCGTGCGGGATACG
AACAACGCATGACGACAATGTGTACAATTCTCGAAGAGGGCAAGTACCTC
ATTGACTCCGGTAGCGCATGGGACGATGTACAACCCATGGCAGAGGATGA
CACTGCCTGGGAAGTCCTGGATAAGATGCAGATGTACGAGTTCTCCTGGC
CCACCGGCGGTATGTTTGTGTGGGTCAAGGTCTGCATCGAGACGCACCCC
TTGCTGGAGAAGTATGGCCCGGAGAAGCTGATCCAAGCTTTGTGGCTGCA
TTTGATGCAAAAGCCGTATTTGTGCCTTTCGGGTCCCGGAACCATGTTTG
CTCCTACAACGGAGCTTCTGGACCGGGCGCAGACATATTACAGGTTGTGC
TTTGCGGCGATGCCTGCGGAGGATGTGTTGGGCATTACTCGGAGGTTGGT
AGATGGATTTCGCGCGTTTTGGCAACGGAAGAATCTCGATGGCTTGGATG
ATGAGGAGGTTGCTCTTAGTAGGCTGCAGGCAAAGGGTTCAGGCAACTTG
TTGGGTTTGGGCTGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000592KJC3_000592Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000592-T2.utr5p1KJC3_000592-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000592-T2.exon1KJC3_000592-T2.exon1Aspergillus niger KJC3exon
KJC3_000592-T2.exon2KJC3_000592-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000592-T2.cdsKJC3_000592-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000592-T2.utr3p1KJC3_000592-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000592-T2KJC3_000592-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1.5
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00155
Product variant 2
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1299798..1302912 +
Powered by Drupal