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KJC3_000609-T1, KJC3_000609-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000609-T1
Unique NameKJC3_000609-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1348236..1350480-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000609-T1 ID=KJC3_000609-T1|Name=KJC3_000609-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2245bp|location=Sequence derived from alignment at ch1:1348236..1350480- (Aspergillus niger KJC3)
GCCGTTGATCCGCAGGAATGCGGAGAAACTTTTGGCGCATTGCTAAAGCT
AAAATTATATGGGACCCCGCCGGCGGTGAGCCGCGCCCATCTATTTGTTT
CTCCAACTTCCGCATTCCGGGCCGTCACTTCTGGATGTCGAGAAGTGTAC
CAGTCTCCGATCCTGCACAGCTTCGCTACGCTTGTTGCTAAGAGCAGTCC
CTCGCCCAAAAAAAATTGCCAATGCCAGCAATAAAACAATTCCCCACCCA
ACTGGCCCACACCCTCAGAACCCACAATGGTAAGCTAACTCTACGCCTTA
AGCTCTAGAAGCTCTAGATCCCCTCTGACGTACCTCAGGCCCCGTGAACG
CAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCTCACCGGCTCGACA
GATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACAATAACAATGCTGC
CGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAAGCGCACGGGTACT
CTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCGGTTCGCCAGCGTT
GGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGCAAGGTGGAACAAT
TAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCAGTCCAATTCGCAG
GCGAGGACGACTCTGTAGTTGTGTCTGGTAAATTCGTCCTGATTTATATG
CACGCTTTGGTTATGATCACTGACGGGTTTTGCGTACGGTTTAGGCAGTG
CAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAAGCCA
ATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACGTACA
TATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTCCGAG
TGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCATCCT
GTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCATCTAC
AACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTATTAA
AGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCACTGCC
ATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAGCAGA
CGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGCAATG
GTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGAAGTG
GTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTGTATC
GTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGTATGT
CTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTCCCCTG
GTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAACTCTG
CACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAACCAT
CGGTCCCTCGGCTTACTTGTAACCCATCAGGAACTGTCAAAGTCTATCGC
TAAGTTTAGGCTGTGTTGTCCGACCCTTGCTCAGCTAGCTAGCGGCTTAG
CTATCAAGCTAGTTCCCAGCCACTCATCAACTAATCTACACAAGACAAGA
CAATAACCCAGCAACCCAGCCATCCGGTCAAACTGGCAAGGTTCACCGTC
AGCAAAATAATCATCAGCCACCAGCGCCGACGCACAGACATTCTCACCCT
CTTGGCTTCCCTTCCCACCCCATGCTCGTGTTCCAACCCTGACTGGATAC
CATGCAATCTTATAAGAAAACGCCACCACCACCATCAGCACGTGTAGCGT
GTAGCGCTTGTCAAAGCACAAATGCGAACGGATGTTCTCAGCCTTGTTGC
CTGCATTATCCATTCCCCCCATCAGTACTGCTGACTGCTAGCCAGCCAGC
CAGCCAGCCAACATTGGCTGATGTCTATCATCTTGCTTACTTTCCGTCCT
TGCCCCTTCCTTCTCGGATATCCCCGGCAAAAAGAAAAGATAGATTGCGT
TGCGTCGCCTCGCATTGCATCAGCTGTCGTGATCATCAGATAGGTGGTGC
GTGCGCCGCGCCACTTCACTCCACTCCACCCAGACCACAAAAGAAAGAAT
AAGTACCGACGCGACGCTACTATTGTTGTTCGTCTGCCGAAACAGGGAAT
AGGTTCGATATGGTATGGTGTGGTGTATCGGTGTAGCGACTACGT
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Coding sequence (CDS) from alignment at ch1:1348236..1350480-

>KJC3_000609-T1 ID=KJC3_000609-T1|Name=KJC3_000609-T1|organism=Aspergillus niger KJC3|type=CDS|length=3447bp|location=Sequence derived from alignment at ch1:1348236..1350480- (Aspergillus niger KJC3)
GCAGTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTAC
AAGCCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCA
CGTACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAG
TCCGAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCG
CATCCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGC
ATCTACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGC
TATTAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGC
ACTGCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAA
AGCAGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATG
GCAATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGA
GAAGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGC
TGTATCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATG
GTATGTCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCT
CCCCTGGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAA
ACTCTGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCT
AAGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCC
TCACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAAC
AATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGA
AGCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCC
GGTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAG
CAAGGTGGAACAATTAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGC
AGTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCA
ATAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACCCACAATGG
CAGTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACA
AGCCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCAC
GTACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGT
CCGAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGC
ATCCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCA
TCTACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCT
ATTAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCA
CTGCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAA
GCAGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGG
CAATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAG
AAGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCT
GTATCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGG
TATGTCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTC
CCCTGGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAA
CTCTGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTA
AGCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCT
CACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACA
ATAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAA
GCGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCG
GTTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGC
AAGGTGGAACAATTAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCA
GTCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCAA
TAAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACCCACAATGGC
AGTGCAGACACAACTATCAACATCTGGGATACCAAGTCCAACTCCTACAA
GCCAATTCAGACCCTCACCGAAGCCCGAGATACTGTTTCTTCCTTGCACG
TACATATGCCCACGTACTCTATCGCAAGCGCGAGCTACGATGGTCGAGTC
CGAGTGTACGATATCCGAATGGGGCGCACCCTTGTTGATGTTCTCGCGCA
TCCTGTTACTAGTGTTCGCTGCTCCAGTGACGGCAATGCTCTTCTAGCAT
CTACAACAGACGGGCGCATCCGAATGCTGGACCGGAGTGACGGCAAGCTA
TTAAAGGCGTTTGGCGGCGACGATGCCAGTCCAATCCAAGGTAATAGCAC
TGCCATATATCGCAAAAGCGAACTTCGAATTCGCTCTGTTTTCGCGAAAG
CAGACGCCATTGTCCTCAGCGGGAGTGAAGCAAATGACTCCGGCAATGGC
AATGGTGCTACGCAGGCGTCCGTATTCGCCTGGGATGTGCTTAGTGGAGA
AGTGGTCGCGTGTGTTCCAGCTGGACCAGGCGTCAAGGCCGTGAGTGCTG
TATCGTGGAATGAAAAAGGAGGTTGCTGGGCTGGTGGTTGTTCAGATGGT
ATGTCTCAGCTATGGCAGTTTCTAATTTCGTTTGTGCAACCCTCCCCTCC
CCTGGTTACGTTTGGTGGCTATCTATCATACCTTGTTCTCGTTTTCAAAC
TCTGCACTGTACCTGTTTTCCTCACTGCGTGGCGCATTGCACGTGGCTAA
GCCCCGTGAACGCAGTGACCTTCTCCAGCTATCCTGGAACCTATGTCCTC
ACCGGCTCGACAGATCGCGCTATTCACCTCTCCCGGGCTATTCCCAACAA
TAACAATGCTGCCGCCGCAGAGACGACGTCCCCGATCCAGAAGTATGAAG
CGCACGGGTACTCTGTGTTGGACATTGCCGTCGCAGCAGACAACTCCCGG
TTCGCCAGCGTTGGTGGAGACCGCCAGGTTTTTCTGTGGGATGTCGAGCA
AGGTGGAACAATTAGGCGCTGGAGTGGACATAATGCGCGTGTTGAGGCAG
TCCAATTCGCAGGCGAGGACGACTCTGTAGTTGTGTCTGATGCCAGCAAT
AAAACAATTCCCCACCCAACTGGCCCACACCCTCAGAACCCACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000609KJC3_000609Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000609-T1KJC3_000609-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000609-T1.cdsKJC3_000609-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000609-T1.utr3p1KJC3_000609-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000609-T1.exon3KJC3_000609-T1.exon3Aspergillus niger KJC3exon
KJC3_000609-T1.exon2KJC3_000609-T1.exon2Aspergillus niger KJC3exon
KJC3_000609-T1.exon1KJC3_000609-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000609-T1.utr5p1KJC3_000609-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR019775
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefInterPro:IPR020472
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1348236..1350480 -
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