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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1362922..1365104+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000614-T1 ID=KJC3_000614-T1|Name=KJC3_000614-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2183bp|location=Sequence derived from alignment at ch1:1362922..1365104+ (Aspergillus niger KJC3)
GAGCTTCATCCGCAGCTCAAAGCTCTGTCTTGCTACCCTTCCATTCCCAG
GTCCCACTTGGCTATCTCAACCGCCTGCCCTCCTACCCCGGCTTATTCAC
AACTCTGAGCAATCGGCTCCTTCTGAAAGTTATCTAATCTCTCCCCCCAT
TTAACCGTATTTCCCCACAACCATGGAGCCTTACGACGATGGTGAGAGGT
CACCCTCCGGATTCTGTCGCGCGAGCTTCACTAACCGTTCCTCCCGCCAG
GTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAG
ATCATCAACGAAGGTGCGCTGTCCAATCTTCAGTGGGGTGTCTCCCGACC
CAACTAATGAGTGGAACAGAGTACAAGACATGGAAGAAGAACGCACCTTT
CCTTTATGACATGATCCTGAGCACGGCATTAGAATGGCCTACTCTTACAA
CACAATGGCTACCTGATAAGCAAGAGTATGCGCGCCCATTGTATTCGTTT
CCTTATAGATTCTAACGTTCTGTAGTGTTCCCGATAAGCCCTACTCGACT
CATCGCCTGCTTATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCT
GCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCGCCTAACCCAGATG
ACTACGATGAAGAGCGTGGGGAGATTGGCGGATACGGCGGCAGCTCGAAG
AAGGCGCCTATGGAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAA
GGGTGAAGTCAACAAGGCGCGATACCAACCACAGAACCCCAACATCATTG
CCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCAC
CCAAGCTTGCCTACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCA
TACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACACACCACCGGACACC
TTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGTAAGATCTGACC
AAAGAAGTGAAACACGATTGCTCTGGAGCTAACCGCTGTTCAGGGATCTG
ACGACGTACACAAAGGGTAACAAGGCACTCAAGCCTGTTCGGACATACAC
CCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTGCATTCTT
CACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTG
CGTGAGGCCGAAACCACGCGTGCGGCTGCATCAGCGGAGGGCCAGCACCG
TGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACGGTCCTGG
CCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTG
AAGACCAAACTGCACGCGCTTGAATGTCACAACGACTCCGTGACTTCGCT
CTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGCTATGACC
GCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAACAGACCCCT
GAGGATGCCCAGGATGGTCCACCCGAGCTGTACGTAACGCTTCCCGTATT
GTACCATGTTACACTGCTGACACTGTTTCTAGTTTGTTCATGCACGGCGG
CCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCGTGGG
TGCTCTGCTCGGCGGCTGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCA
GATGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGAGGAGTTGGA
ACCATGAGCTGCCAGTTTCAGATGCAAATTTGCATCAGGGGATGGCTGGT
CTCACTTCATGTACTTCTTCGATGGGGTTGCTACAATCACAGCGAGGATG
TGGGAAAGAAAACAAACACATGACAACGAATTCTGCTGCACAGTCGGTTA
ACAGGAGTTTAGTGGCTGCAATGTAACATATGAAGCCTAGCTACTTAGTA
CTGCATCATTTTCCAGACTATGGTTTGTTTCCCTTCTTTGAGTAGATTGC
CTCAGGCAACTACCCTCGTGATGTCGACATGATGATTGGCGCCCCACTCG
GGAGCGTTTTTCTGCCGTTGCCAATCGGAGCCGCAATGACCGAGCTGGAT
TGATTTCTTTGCAACTACTAAGTAAGTAGGGAGGGATCGGGTTCAGATAG
ATGAACATGTGCGATCCTAGCTATCGGATGTGA back to topCoding sequence (CDS) from alignment at ch1:1362922..1365104+ >KJC3_000614-T1 ID=KJC3_000614-T1|Name=KJC3_000614-T1|organism=Aspergillus niger KJC3|type=CDS|length=7866bp|location=Sequence derived from alignment at ch1:1362922..1365104+ (Aspergillus niger KJC3)
ATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGA
AGAGCGCACCGAGGAGAAGATCATCAACGAAGAGTACAAGACATGGAAGA
AGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGG
CCTACTCTTACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAA
GCCCTACTCGACTCATCGCCTGCTTATTGGCACTCATACCTCGAGTGATG
CGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCG
CCTAACCCAGATGACTACGATGAAGAGCGTGGGGAGATTGGCGGATACGG
CGGCAGCTCGAAGAAGGCGCCTATGGAAATCAAGTTCAACATTGTGCAAA
AGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAAC
CCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGA
TCGCTCAAAGCACCCAAGCTTGCCTACAGGCACTGTCAACCCTCAGATGG
AGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACAC
ACCACCGGACACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTG
GGATCTGACGACGTACACAAAGGGTAACAAGGCACTCAAGCCTGTTCGGA
CATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTG
CATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCT
CGATGTGCGTGAGGCCGAAACCACGCGTGCGGCTGCATCAGCGGAGGGCC
AGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACG
GTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACG
TAATCTGAAGACCAAACTGCACGCGCTTGAATGTCACAACGACTCCGTGA
CTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGC
TATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAACA
GACCCCTGAGGATGCCCAGGATGGTCCACCCGAGCTTTTGTTCATGCACG
GCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCG
TGGGTGCTCTGCTCGGCGGCTGAAGACAACCTGCTGCAGGTGTGGAAGGT
GGCAGATGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGAGGAGT
TGGAACCATGAATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAA
GAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATCAACGAAGAGTACAA
GACATGGAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGG
CATTAGAATGGCCTACTCTTACAACACAATGGCTACCTGATAAGCAAGAT
GTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTTATTGGCACTCATAC
CTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTA
ATCCGACTGCGCCTAACCCAGATGACTACGATGAAGAGCGTGGGGAGATT
GGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATGGAAATCAAGTTCAA
CATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACC
AACCACAGAACCCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTA
ATGATCTGGGATCGCTCAAAGCACCCAAGCTTGCCTACAGGCACTGTCAA
CCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCT
GGAGTCCACACACCACCGGACACCTTGCTACAGGTAGCGAGGACAAGACA
GTCCGTCTTTGGGATCTGACGACGTACACAAAGGGTAACAAGGCACTCAA
GCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAAT
ACCATCCTCTGCATTCTTCACTCATCGGAACGGTATCTGATGATATTACC
CTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACGCGTGCGGCTGCATC
AGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTG
CCGCAGAAACGGTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTG
TGGGATCTACGTAATCTGAAGACCAAACTGCACGCGCTTGAATGTCACAA
CGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGG
CCAGTGCCAGCTATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACT
GGGGAGGAACAGACCCCTGAGGATGCCCAGGATGGTCCACCCGAGCTTTT
GTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACC
TGAATGATCCGTGGGTGCTCTGCTCGGCGGCTGAAGACAACCTGCTGCAG
GTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGATCTGGAGGATGTGCC
GACCGAGGAGTTGGAACCATGAATGGAGCCTTACGACGATGGTTTCATTG
AGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATCAAC
GAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTTTATGACATGAT
CCTGAGCACGGCATTAGAATGGCCTACTCTTACAACACAATGGCTACCTG
ATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTTATT
GGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGT
ACAGCTCCCTAATCCGACTGCGCCTAACCCAGATGACTACGATGAAGAGC
GTGGGGAGATTGGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATGGAA
ATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAA
GGCGCGATACCAACCACAGAACCCCAACATCATTGCCACCATGTGCACAG
ATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAAGCTTGCCTACA
GGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTT
CGGTCTCAGCTGGAGTCCACACACCACCGGACACCTTGCTACAGGTAGCG
AGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACACAAAGGGTAAC
AAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAA
CGATGTTCAATACCATCCTCTGCATTCTTCACTCATCGGAACGGTATCTG
ATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACGCGT
GCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGC
GTTCAACCCTGCCGCAGAAACGGTCCTGGCCACCGGATCGGCCGATAAGT
CGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCGCTT
GAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGA
GAGCGTACTGGCCAGTGCCAGCTATGACCGCAAGATCATGTTCTGGGATC
TTAGCCGGACTGGGGAGGAACAGACCCCTGAGGATGCCCAGGATGGTCCA
CCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTT
CAGCTGGAACCTGAATGATCCGTGGGTGCTCTGCTCGGCGGCTGAAGACA
ACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGATCTG
GAGGATGTGCCGACCGAGGAGTTGGAACCATGAATGGAGCCTTACGACGA
TGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGA
AGATCATCAACGAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTT
TATGACATGATCCTGAGCACGGCATTAGAATGGCCTACTCTTACAACACA
ATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATC
GCCTGCTTATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAG
ATCGCTCATGTACAGCTCCCTAATCCGACTGCGCCTAACCCAGATGACTA
CGATGAAGAGCGTGGGGAGATTGGCGGATACGGCGGCAGCTCGAAGAAGG
CGCCTATGGAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGT
GAAGTCAACAAGGCGCGATACCAACCACAGAACCCCAACATCATTGCCAC
CATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAA
GCTTGCCTACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACT
CGCGAGGGTTTCGGTCTCAGCTGGAGTCCACACACCACCGGACACCTTGC
TACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACA
CAAAGGGTAACAAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCC
TCTATTGTCAACGATGTTCAATACCATCCTCTGCATTCTTCACTCATCGG
AACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCG
AAACCACGCGTGCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATC
AACGCCGTTGCGTTCAACCCTGCCGCAGAAACGGTCCTGGCCACCGGATC
GGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAAC
TGCACGCGCTTGAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCAT
CCATTTGAGGAGAGCGTACTGGCCAGTGCCAGCTATGACCGCAAGATCAT
GTTCTGGGATCTTAGCCGGACTGGGGAGGAACAGACCCCTGAGGATGCCC
AGGATGGTCCACCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGC
ATTTCGGATTTCAGCTGGAACCTGAATGATCCGTGGGTGCTCTGCTCGGC
GGCTGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCG
GCAAGGATCTGGAGGATGTGCCGACCGAGGAGTTGGAACCATGAATGGAG
CCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCG
CACCGAGGAGAAGATCATCAACGAAGAGTACAAGACATGGAAGAAGAACG
CACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGGCCTACT
CTTACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTA
CTCGACTCATCGCCTGCTTATTGGCACTCATACCTCGAGTGATGCGCAAA
ACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCGCCTAAC
CCAGATGACTACGATGAAGAGCGTGGGGAGATTGGCGGATACGGCGGCAG
CTCGAAGAAGGCGCCTATGGAAATCAAGTTCAACATTGTGCAAAAGATTG
ATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAACCCCAAC
ATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTC
AAAGCACCCAAGCTTGCCTACAGGCACTGTCAACCCTCAGATGGAGCTTT
TAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACACACCACC
GGACACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCT
GACGACGTACACAAAGGGTAACAAGGCACTCAAGCCTGTTCGGACATACA
CCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTGCATTCT
TCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGT
GCGTGAGGCCGAAACCACGCGTGCGGCTGCATCAGCGGAGGGCCAGCACC
GTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACGGTCCTG
GCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCT
GAAGACCAAACTGCACGCGCTTGAATGTCACAACGACTCCGTGACTTCGC
TCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGCTATGAC
CGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAACAGACCCC
TGAGGATGCCCAGGATGGTCCACCCGAGCTTTTGTTCATGCACGGCGGCC
ACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCGTGGGTG
CTCTGCTCGGCGGCTGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGA
TGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGAGGAGTTGGAAC
CATGAATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAG
GAGGAAGAGCGCACCGAGGAGAAGATCATCAACGAAGAGTACAAGACATG
GAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAG
AATGGCCTACTCTTACAACACAATGGCTACCTGATAAGCAAGATGTTCCC
GATAAGCCCTACTCGACTCATCGCCTGCTTATTGGCACTCATACCTCGAG
TGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGA
CTGCGCCTAACCCAGATGACTACGATGAAGAGCGTGGGGAGATTGGCGGA
TACGGCGGCAGCTCGAAGAAGGCGCCTATGGAAATCAAGTTCAACATTGT
GCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCAC
AGAACCCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATC
TGGGATCGCTCAAAGCACCCAAGCTTGCCTACAGGCACTGTCAACCCTCA
GATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTC
CACACACCACCGGACACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGT
CTTTGGGATCTGACGACGTACACAAAGGGTAACAAGGCACTCAAGCCTGT
TCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATC
CTCTGCATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAA
ATTCTCGATGTGCGTGAGGCCGAAACCACGCGTGCGGCTGCATCAGCGGA
GGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAG
AAACGGTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGAT
CTACGTAATCTGAAGACCAAACTGCACGCGCTTGAATGTCACAACGACTC
CGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTG
CCAGCTATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAG
GAACAGACCCCTGAGGATGCCCAGGATGGTCCACCCGAGCTTTTGTTCAT
GCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATG
ATCCGTGGGTGCTCTGCTCGGCGGCTGAAGACAACCTGCTGCAGGTGTGG
AAGGTGGCAGATGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGA
GGAGTTGGAACCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000614-T1.utr5p1 | KJC3_000614-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000614-T1.utr3p1 | KJC3_000614-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.6 |
| Note | SMCOG1173:WD-40 repeat-containing protein |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR022052 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12265 |
| Product | Histone acetyltransferase type B subunit 2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1362922..1365104 + |
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