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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1488298..1489879+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000655-T1 ID=KJC3_000655-T1|Name=KJC3_000655-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1582bp|location=Sequence derived from alignment at ch1:1488298..1489879+ (Aspergillus niger KJC3)
ATCTCTTCGAATAGAATTACTTTGCCTTTTTGTGTCTATCTGCAGTGAGC
CAGTCCAACTCTCGATTCATGGGTACCCACATACTAACCCTCCAGATACT
ACACTCCAACCTTCCCGATATATACTACTCCGCACCACCTCCACTCTCAT
TTTAGACTCACAACATCACACTCACTCAACATCATATTATCACTCCCCTA
CCACTCAATCGCACAAGTACCACTAGCATACAGCAACTACAATGATCCCT
CTCCCCACCCCCTTCTCCCAAATCCCTCGATACCCCCTCCTCTACTCCAC
CCCATCCCCCATCCACCCTCTCCCAACCCTAACCAGAAGTCTCCTCCAAT
CCCCAACCCCCAAGACCAACCCCAATCCCGGTATAAACATAACCCTCCAC
CTGAAACGCGAAGACCACGCCTCCCCCCTAACCTCCAGCGGCAACAAATA
CCGCAAACTCGAGTACCTAATACCCGACATTCTCTCACTAACACCCAAAT
ACGGCTCTCTAGCACCAGGACCTGACCACGGCACTCTCACCACTCCACCA
CAACCACAACCACCCAAGAAGACAGAAAAAGAAGTAACCCTAGTAACAGA
AGGCGCCCTCCAAAGCAATCATACCATCCAAGTAACCAGCATCGCGAACC
ACCTGAACCTCTCACGGCCCGTGATTATCCTCCACAAGGCCACGGGGGGC
GGATACGCCCAAGCAACAGATAAGAGTCTCTTCGAGAGAACGGGAAATGT
GCAGATAGCGAAGCTATTAGGGGCTGATGTGAGGGTGTTGGACTCGGCGA
CTGTTTCAACATCTTCTACAAGTAAAGAAGAAAAGGAAGAAGAAGAAGAA
GACGGAGTCCACTCCATCCTCACGACCCTCCAAAATGAAGGCAAAAATCC
CTACTGGATCCCCTCAGGAGCAAGTCTCCACCCACTAGGTGGATTGGGGT
ACGCAAGATGCGCATTCGAGATTGCATTGCAGGAGAAACAACCGCAATCA
CTGTCACAACCAGAGGGTTCAAACCTCGGCAGATTTGACTACATCTTTCT
CGCCTGCGGCAGCGGCAGCACCCACGGCGGGCTCATCGCCGGTCTGAAAC
TTCTCGAGAAACAAGAAACCATTACCACCACCACCACCACCACCACCACC
ACCACTTCCCTACCGCCCCGGAAAATCATAGGCATCCTCACATCCCCGAC
TCGCTCACGCAGCTACCACGAAAACAGAGTATTACAGTTTGCGCGACAAG
CGGGAAGACTTATCGGGCTTGAAGATGTGGAGAGGGAGATAACCATGCAG
GATGTGCATATTGATGAGCGGTTTGCGGGCACGGCGTATGGAGAAGTGGA
TGATGCGACGAGGGATATGATGCGGTTGATGGCAAGAGAGGAAGCGGTGT
TGTTGGATCCGGTGTATACGGGGAAGGTGGCGAGGGGGATGGTGCATTGG
GTGAGGGAGGGGGAGATTTCCAGGGATTGGGTTGCGCGAGGGGGATGGGA
AAGGGATGGAGGTAATGTTAAGGTGTTGATGGTACATACGGGGGGACAGT
CTGCTTTGAGTGCGTATGCAGATGTTGTGTAG back to topCoding sequence (CDS) from alignment at ch1:1488298..1489879+ >KJC3_000655-T1 ID=KJC3_000655-T1|Name=KJC3_000655-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch1:1488298..1489879+ (Aspergillus niger KJC3)
ATGATCCCTCTCCCCACCCCCTTCTCCCAAATCCCTCGATACCCCCTCCT
CTACTCCACCCCATCCCCCATCCACCCTCTCCCAACCCTAACCAGAAGTC
TCCTCCAATCCCCAACCCCCAAGACCAACCCCAATCCCGGTATAAACATA
ACCCTCCACCTGAAACGCGAAGACCACGCCTCCCCCCTAACCTCCAGCGG
CAACAAATACCGCAAACTCGAGTACCTAATACCCGACATTCTCTCACTAA
CACCCAAATACGGCTCTCTAGCACCAGGACCTGACCACGGCACTCTCACC
ACTCCACCACAACCACAACCACCCAAGAAGACAGAAAAAGAAGTAACCCT
AGTAACAGAAGGCGCCCTCCAAAGCAATCATACCATCCAAGTAACCAGCA
TCGCGAACCACCTGAACCTCTCACGGCCCGTGATTATCCTCCACAAGGCC
ACGGGGGGCGGATACGCCCAAGCAACAGATAAGAGTCTCTTCGAGAGAAC
GGGAAATGTGCAGATAGCGAAGCTATTAGGGGCTGATGTGAGGGTGTTGG
ACTCGGCGACTGTTTCAACATCTTCTACAAGTAAAGAAGAAAAGGAAGAA
GAAGAAGAAGACGGAGTCCACTCCATCCTCACGACCCTCCAAAATGAAGG
CAAAAATCCCTACTGGATCCCCTCAGGAGCAAGTCTCCACCCACTAGGTG
GATTGGGGTACGCAAGATGCGCATTCGAGATTGCATTGCAGGAGAAACAA
CCGCAATCACTGTCACAACCAGAGGGTTCAAACCTCGGCAGATTTGACTA
CATCTTTCTCGCCTGCGGCAGCGGCAGCACCCACGGCGGGCTCATCGCCG
GTCTGAAACTTCTCGAGAAACAAGAAACCATTACCACCACCACCACCACC
ACCACCACCACCACTTCCCTACCGCCCCGGAAAATCATAGGCATCCTCAC
ATCCCCGACTCGCTCACGCAGCTACCACGAAAACAGAGTATTACAGTTTG
CGCGACAAGCGGGAAGACTTATCGGGCTTGAAGATGTGGAGAGGGAGATA
ACCATGCAGGATGTGCATATTGATGAGCGGTTTGCGGGCACGGCGTATGG
AGAAGTGGATGATGCGACGAGGGATATGATGCGGTTGATGGCAAGAGAGG
AAGCGGTGTTGTTGGATCCGGTGTATACGGGGAAGGTGGCGAGGGGGATG
GTGCATTGGGTGAGGGAGGGGGAGATTTCCAGGGATTGGGTTGCGCGAGG
GGGATGGGAAAGGGATGGAGGTAATGTTAAGGTGTTGATGGTACATACGG
GGGGACAGTCTGCTTTGAGTGCGTATGCAGATGTTGTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.7 |
| DBxref | InterPro:IPR036052 |
| DBxref | InterPro:IPR001926 |
| DBxref | PFAM:PF00291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1488298..1489879 + |
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