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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1501987..1503922+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000659-T1 ID=KJC3_000659-T1|Name=KJC3_000659-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1936bp|location=Sequence derived from alignment at ch1:1501987..1503922+ (Aspergillus niger KJC3)
CCAAATTCTGGGATAATTCCAGCCAGAGACTGGGGATACAGCCAATATCA
AACCCACCATCTATCGATCTACTACACAGTACTACAAAGTACTACTAGTG
GGGAAAGGCAGCACATTTTCACCGGCACGCGCCGCGCTCATCTTCTCCAA
CAACGGCCGGATTCTCTCTGCCTCTCTCCACCATCCCCATCCCTTCGTCA
ACCCTCCACTCCTCAGGGTCGCCATGGGCTCAGAGTCTTCCCCACAGCCA
TCGAATGAGATGCTCTCCTTCCATGTTACGGCCTCCGTCCTGACTCCCCG
ACTGGGAAGACTGGCCTTTGCCGGCAGAAAACCCATCTCCACCCCACATT
ACATCCCTCTGGCCTCCCGAGGCGTCGTTCCGCATATTGCCCATGATGTG
CTGCGTGATCACACAGACATCGGCAGTCTATATGTCGGTCTCGAAGATTG
TATGCCCTCCCAGCCACCCTCTCTCCTTATCCGGAGGTCGAATCCTCGCT
GACCCGAATGCCCATTGGGGCCCAGATCAGTCGTAGAAAGACAAAGCCAA
AAACATCCGCCACCGGTCTATACCATTCCCACCGCGCAAGATGAATCGGC
CTTGCGCAAGTTCGTCGCTCTGCCCGATGACCTCCTCTTGATCATGGGCG
CACGTCGGGAGCCCCCGATCAAATGCCCCCCGGCCAACACGCCAAACTCC
GTCGCCATTTACACCTCCGTTGGGTTCAGACAGCTCGAAGCTACCCAGTA
CGTCGACGCCGTGCAGAAGCTCAGCCCGGATATCGTCGTCGGACTGGCAG
ATCTTGTGCTTGGACACACCCCTGGCAACAAGAGACGCGGCAAGATGGTG
GATCGAACCCACGCTTTCACTACGCATGCCACTGGATTGCTCTACGGCAG
CACAGTGCCCGAGGAGAACCGATCAAAGTCAGCCTACTTCGCTCCTGTCC
TCCCTCTCGAAAACGCCCAGCAGTCAATCTACATGGACGACCTCGAGACC
GAGCTCAGACCATACATCTCCGGCCTGGCACTCTACGAATCGGCTTCCCT
ATCAGCCATCTCCGAACCGCTCGGAGACCTCCCCCGCCTCCTCTACAGCG
CACCCGCGACTCCACACGATATCCTCCGCGACGTTTCCCTCGGAGCAGAT
CTCCTCACCATCCCCTTCATGGGTGTCTGCTCTGACGCCGGCATCGCCCT
GGATTTCACCTTCCCTTCACCCAACACCCCCAGGACCGTCACCCAACCTC
ATGACCTCGCCTTCGACCTGTGGTCCCCGTCTCACACAACCGACACCTCC
CCTCTCTCCAAATCATGCGAATGCTACACTTGCCGCAATCACCACCGCGC
ATACATCCATCACCTCCTGACCGCCAAGGAAATGCTCGCCTGGACACTTC
TCCAAGTCCACAACCACCATGTAATGGATACTTTCTTCGCTGCCATCCGC
GAAAGCATTTCCCGGGGTACCTTCGAAGCCGACACTCAAACCTTCCAACG
CACTTACGTCTCCGAACTACCCAAGCCTACCGGCCAGGGTCCTCGGTATG
TACATATATATACATCCTATTCCCCGAATTTCATAACCACACCCGCATCC
CATAACTGACAACTGATCGCTATATAGACTCCGCGGCTACCAACTCCCCG
CGTCTGGGCCCAACCAACCCCGCCGTAATGCCCGCGCATACGGTAAACTC
GACGACGCAATGGAGAAGTTCGCCGAGTCGCAGTCTTCTCTGGCGACGCC
GGATACAGGCGCCGAGGGGCTTGAGGAGCATGGATTTGGGATGAAGGAGG
TGTCATAGTAGCTTGGTCGGTTTATAGATAGCTAGATGCATGGATGCATG
GATACATGAATGCAGACTAGAGATAGTTATGGCATAGCATAGCGTGGGTT
TGTGGATGATGAATGATTAATTGAACGAAGAGTTAT back to topCoding sequence (CDS) from alignment at ch1:1501987..1503922+ >KJC3_000659-T1 ID=KJC3_000659-T1|Name=KJC3_000659-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch1:1501987..1503922+ (Aspergillus niger KJC3)
ATGGGCGCACGTCGGGAGCCCCCGATCAAATGCCCCCCGGCCAACACGCC
AAACTCCGTCGCCATTTACACCTCCGTTGGGTTCAGACAGCTCGAAGCTA
CCCAGTACGTCGACGCCGTGCAGAAGCTCAGCCCGGATATCGTCGTCGGA
CTGGCAGATCTTGTGCTTGGACACACCCCTGGCAACAAGAGACGCGGCAA
GATGGTGGATCGAACCCACGCTTTCACTACGCATGCCACTGGATTGCTCT
ACGGCAGCACAGTGCCCGAGGAGAACCGATCAAAGTCAGCCTACTTCGCT
CCTGTCCTCCCTCTCGAAAACGCCCAGCAGTCAATCTACATGGACGACCT
CGAGACCGAGCTCAGACCATACATCTCCGGCCTGGCACTCTACGAATCGG
CTTCCCTATCAGCCATCTCCGAACCGCTCGGAGACCTCCCCCGCCTCCTC
TACAGCGCACCCGCGACTCCACACGATATCCTCCGCGACGTTTCCCTCGG
AGCAGATCTCCTCACCATCCCCTTCATGGGTGTCTGCTCTGACGCCGGCA
TCGCCCTGGATTTCACCTTCCCTTCACCCAACACCCCCAGGACCGTCACC
CAACCTCATGACCTCGCCTTCGACCTGTGGTCCCCGTCTCACACAACCGA
CACCTCCCCTCTCTCCAAATCATGCGAATGCTACACTTGCCGCAATCACC
ACCGCGCATACATCCATCACCTCCTGACCGCCAAGGAAATGCTCGCCTGG
ACACTTCTCCAAGTCCACAACCACCATGTAATGGATACTTTCTTCGCTGC
CATCCGCGAAAGCATTTCCCGGGGTACCTTCGAAGCCGACACTCAAACCT
TCCAACGCACTTACGTCTCCGAACTACCCAAGCCTACCGGCCAGGGTCCT
CGACTCCGCGGCTACCAACTCCCCGCGTCTGGGCCCAACCAACCCCGCCG
TAATGCCCGCGCATACGGTAAACTCGACGACGCAATGGAGAAGTTCGCCG
AGTCGCAGTCTTCTCTGGCGACGCCGGATACAGGCGCCGAGGGGCTTGAG
GAGCATGGATTTGGGATGAAGGAGGTGTCATAGATGGGCGCACGTCGGGA
GCCCCCGATCAAATGCCCCCCGGCCAACACGCCAAACTCCGTCGCCATTT
ACACCTCCGTTGGGTTCAGACAGCTCGAAGCTACCCAGTACGTCGACGCC
GTGCAGAAGCTCAGCCCGGATATCGTCGTCGGACTGGCAGATCTTGTGCT
TGGACACACCCCTGGCAACAAGAGACGCGGCAAGATGGTGGATCGAACCC
ACGCTTTCACTACGCATGCCACTGGATTGCTCTACGGCAGCACAGTGCCC
GAGGAGAACCGATCAAAGTCAGCCTACTTCGCTCCTGTCCTCCCTCTCGA
AAACGCCCAGCAGTCAATCTACATGGACGACCTCGAGACCGAGCTCAGAC
CATACATCTCCGGCCTGGCACTCTACGAATCGGCTTCCCTATCAGCCATC
TCCGAACCGCTCGGAGACCTCCCCCGCCTCCTCTACAGCGCACCCGCGAC
TCCACACGATATCCTCCGCGACGTTTCCCTCGGAGCAGATCTCCTCACCA
TCCCCTTCATGGGTGTCTGCTCTGACGCCGGCATCGCCCTGGATTTCACC
TTCCCTTCACCCAACACCCCCAGGACCGTCACCCAACCTCATGACCTCGC
CTTCGACCTGTGGTCCCCGTCTCACACAACCGACACCTCCCCTCTCTCCA
AATCATGCGAATGCTACACTTGCCGCAATCACCACCGCGCATACATCCAT
CACCTCCTGACCGCCAAGGAAATGCTCGCCTGGACACTTCTCCAAGTCCA
CAACCACCATGTAATGGATACTTTCTTCGCTGCCATCCGCGAAAGCATTT
CCCGGGGTACCTTCGAAGCCGACACTCAAACCTTCCAACGCACTTACGTC
TCCGAACTACCCAAGCCTACCGGCCAGGGTCCTCGACTCCGCGGCTACCA
ACTCCCCGCGTCTGGGCCCAACCAACCCCGCCGTAATGCCCGCGCATACG
GTAAACTCGACGACGCAATGGAGAAGTTCGCCGAGTCGCAGTCTTCTCTG
GCGACGCCGGATACAGGCGCCGAGGGGCTTGAGGAGCATGGATTTGGGAT
GAAGGAGGTGTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016763 | transferase activity, transferring pentosyl groups |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006400 | tRNA modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000659-T1.utr3p1 | KJC3_000659-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036511 |
| DBxref | InterPro:IPR002616 |
| DBxref | PFAM:PF01702 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1501987..1503922 + |
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