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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1545569..1547151- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000677-T1 ID=KJC3_000677-T1|Name=KJC3_000677-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1583bp|location=Sequence derived from alignment at ch1:1545569..1547151- (Aspergillus niger KJC3)
GGTGCAGGAGCGCGCCGGCGGAAAGTCGACCACTCGGCAGACTTGCCGGA
TGGGGCGCCGTAACACCGATAAGCCGCCTTCCTTTGGTTCTTTCATCCAC
ACTCCGTCGCATCATCTCCCCCCCCCCAGCAGTCTCCATAACCCAGTCCA
TCACCTGTACACTTTCTACCCTGAATAACTTGAACAGCTGAGTCTTTATT
CGCGCCTTACCGAGATTTCGCAGACAGATCGAGATACGACTTTTCATCCG
CGCTGCGAGCAAGCCTTGTCGGCTCTCGACAAAGCAACATCAACATCACC
CATCACACCATTTCTTAACACAAACACATCATGTCCTCACCACCACCACC
GTCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAAC
CACTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACC
TCCTTCCCCAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCGG
CAGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGGGACCAGCGCAGATG
GGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAG
AAGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACT
GGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGGTGGTGCTTCTGGCG
GTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATGAGGATGAGGATTTT
GATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGGACGACGGATACGGA
GGCGGAGAAGAAGAATATGGCGTATGCATCCCTCCTTTTGGACGACTCTA
TATCTGGCTTGTGGGCGAAGTTGCTAACTGGTTCTGGTGTAGGTTGTTGG
TGGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGTTCAAACGA
GCCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCATGCGCTGTC
GCAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTTTACGAAGG
TGTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGG
GCTATCGCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGC
GACGACAACAACAACGACAACCACAACACCTGGGGGTATTAAGCAGGAGC
CCATGGAAAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAG
CTGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGA
AGCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCT
CGGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCG
GCGGGTAGTGTTGGCGGACGGCGCATCTTCCGGTAATGGAATATGGATCT
GGTTATGGTAAAGCTGGGAGCGCAGAGGTGAGCGTGGATAGCAGAATGGT
GGCTGAAATACTGAGAAAGACCACTGCAGTAATGATAGTATCATAATAAA
TGATGATAGACGGATTGTCTATAGTTACTGAAC back to topCoding sequence (CDS) from alignment at ch1:1545569..1547151- >KJC3_000677-T1 ID=KJC3_000677-T1|Name=KJC3_000677-T1|organism=Aspergillus niger KJC3|type=CDS|length=2070bp|location=Sequence derived from alignment at ch1:1545569..1547151- (Aspergillus niger KJC3)
GTTGTTGGTGGATGCATTCAATCCCATCCAGTCGGAGCGATATGACCTGT
TCAAACGAGCCAAATTACGAAAGGAGACGCTACGACGTATTGTCAATCAT
GCGCTGTCGCAGTCTGTGCCGGCTAGTGTGGTTACAACGATTAATGGCTT
TACGAAGGTGTTTGCGGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGG
CGGAGTGGGCTATCGCTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCT
GAACAGGCGACGACAACAACAACGACAACCACAACACCTGGGGGTATTAA
GCAGGAGCCCATGGAAAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGG
ATGTTAAGCTGCCTCCGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCAT
CTAAGAGAAGCGCTGCGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGT
AGGGTTCTCGGGTCTGAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGA
CTTGGTCGGCGGGTAGTGTTGGCGGACGGCGCATCTTCCGGTAAATGTCC
TCACCACCACCACCGTCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTC
GGCCTCCTCTCAACCACTCGGCAGCCATCCCAAGCGACCGCGCATGCACC
CCCTCCGCCAGACCTCCTTCCCCAACACCATCGACGCAGACACGCGCACC
TACAGCGATGCCGGCAGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGG
GACCAGCGCAGATGGGGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGA
AGAGTAAAGCGGAGAAGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCG
GGAATGGATCGACTGGGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGG
TGGTGCTTCTGGCGGTGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATG
AGGATGAGGATTTTGATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGG
ACGACGGATACGGAGGCGGAGAAGAAGAATATGGCGTTGTTGGTGGATGC
ATTCAATCCCATCCAGTCGGAGCGATATGACCTGTTCAAACGAGCCAAAT
TACGAAAGGAGACGCTACGACGTATTGTCAATCATGCGCTGTCGCAGTCT
GTGCCGGCTAGTGTGGTTACAACGATTAATGGCTTTACGAAGGTGTTTGC
GGGTGAGATTATTGAGAAGGCTCGTACCGTGCAGGCGGAGTGGGCTATCG
CTCATGATCAGGCGGCTTTGGCTGCAATTGAAGCTGAACAGGCGACGACA
ACAACAACGACAACCACAACACCTGGGGGTATTAAGCAGGAGCCCATGGA
AAGGGGGCCCATGTCTACGCCTATGGGGAAGAAGGATGTTAAGCTGCCTC
CGAATCCCCATCGGGGCCAGTTGCTGCCCTCGCATCTAAGAGAAGCGCTG
CGGCGGTATAAGCGGGATGGAGAGGGTGGAGGCGTAGGGTTCTCGGGTCT
GAGTATGGGCAATCTGGGGGTGCGAGGGTCGGTGACTTGGTCGGCGGGTA
GTGTTGGCGGACGGCGCATCTTCCGGTAAATGTCCTCACCACCACCACCG
TCCTCAAACCCCCTCAAACGCCCCTCCATCTCCTCGGCCTCCTCTCAACC
ACTCGGCAGCCATCCCAAGCGACCGCGCATGCACCCCCTCCGCCAGACCT
CCTTCCCCAACACCATCGACGCAGACACGCGCACCTACAGCGATGCCGGC
AGCGTGACGGGCAGCTTTACAGGTAGCCTGGGCGGGACCAGCGCAGATGG
GGTGTTCCTAACGAAGGGAAAGAAGCGCGGCAGGAAGAGTAAAGCGGAGA
AGGAGCGCGAGAGAGAAGAAGGGAGTTTGCGGGCGGGAATGGATCGACTG
GGGTCGGTGGATGTGGATGGCGCGTCAGTGAGGGGTGGTGCTTCTGGCGG
TGCCGGAGGAGGAGGGGGAGGAGAAGATGCAGATGAGGATGAGGATTTTG
ATGATGAGGGGGAGTTGTTGGGGAGGGAAGAGGGGACGACGGATACGGAG
GCGGAGAAGAAGAATATGGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000677-T1.utr3p1 | KJC3_000677-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000677-T1.utr5p1 | KJC3_000677-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.8 |
| Note | BUSCO:EOG09264VRO |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR006809 |
| DBxref | PFAM:PF04719 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1545569..1547151 - |
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