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KJC3_000698-T1, KJC3_000698-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000698-T1
Unique NameKJC3_000698-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1596566..1598964+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000698-T1 ID=KJC3_000698-T1|Name=KJC3_000698-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2399bp|location=Sequence derived from alignment at ch1:1596566..1598964+ (Aspergillus niger KJC3)
CTCTTGTTTTCATTTTGCCTTACCTTCGTCCATTCCTCTTCCCGACCTTG
TTCATTCCCTGCCCATCCTTCTGTCTGCTTCGTGGCATAGATTGATAAAA
CACATTGCTGCTGCACGCCCAATCTCCTCCGGTGTGCTCTGCACCACACC
TCGTCTCGCTTACCGGCTGAAGGGGCGCACTTCCGCTCTTCCGGCCGCCG
AAGCGATCAAGTGACACCACCACTTCTTCCTTCCCACCTGTTGGTCCGTT
TTCTTCCCCCCCCAAACACCTCCCGCAACCCGCTCCCCGCGGTGAAAAAA
TTATGACTGCTGACCACGATCCAGGCCACCTCTTACAATAAAAAGAGGTC
CCCTGAAAATCATGGCCACTCCAGCAGCTCCCTCACTCGCCCCTGCGCCC
GGTCCAGCTCCGTTGGCACCCGCATTGGCCGCCAAGCCAGCCATCTCACC
GTCTCCCGGTCCGGGCACACCCGGTTCCGTCACCTCCAAGGAATGGGTGA
TTCCCCCTCGTCCCAAGCCCGGCCGCAAGCCCGCCACAGACACGCCCCCT
ACCAAACGCAAAGCGCAGAATCGAGCTGCCCAGAGAGCTTTCCGCGAGCG
TAGAGCAGCCCGCGTCAACGAACTCGAGGACCAGATCAAGAAGATTGAAG
ACGACCATGAGATCCATGTGTTGCAACTCAAGGAGCAGATTTCGAACCTT
TCCCATGAGGTCGAACAATGTCGGAGCGAAATGGCCTGGTGGCGTGACCG
TTGCCACGCTTTGGAAAAAGAGGTCTCCGTCGAGCGCAGCGCTAAAGAAA
GCCTCGTGAAGGAGTTCCGCTCCTCGTTGTCCGACAAGAATGCCTCTCGC
TCCGACAAGGCACCCTTGACACGCATACCCAGAGACTCATCTGCAGCTCA
TGCGGCAGTTGAGAACAACATGCACGAGGAGCGGGAGGAGGTGCCCCTGG
GCTGTAGTAACTGCTCGAACGTGCACTGTCAGTGCATTGAAGACGCCTTT
AGTGGCATGCCCGGCATCGAACGGACTTCAGCCCAGTCAAAGCGTCCTGA
TAACTCGAGCCAGTCTCATGCCGAACCTGAAATCAAGCCCGAGCCAGAGG
AGATGGAGATCGATTTCACAACGCGATTCGCGGCCCCTCATCACGTCCAG
GACGACACTGTCACTAACGTTTCCTCCCCCGCCGTCGATCCTTGTGGTTT
CTGCCAGGATGGCACGCCATGCATTTGTGCTGAAATGGCTGCCCAGGAAG
AGGAGCGCCGGCGGCGCAACTCGTTCGAGAACAACCGCCTGGCACCCATC
CAGAACCTGTCGCAGTTCACGCCGCCCCCTTCCGACGGCGATGTGCGGTC
CGAGGTGACCCTCCCCCCCATTAGCCAAGCGACAAATCCCTGCGCCAATG
GCCCGGGTACTTGTGCCCAATGTCTCGCCGATCCCAGGCGGACCCTTTTT
TGCAAGACGCTGGCGGCCTCCCGCCCCGCCAGCGCTGCTCCCTCCGGATG
TTGCGGCGGTAAAGGCGCTGATGGTGGATGCTGCATGTCACGCAACTCCA
ACCCTCAACGCAGCGGGTCGACTCAACAACAATCACAGACTTCCAGCTCG
CGCCGCTCGGCGACTCCATCCCTGACTCTCTCCTGTGCCGACGCCTTCAC
TACCCTCTCCCGCCACCCGAACTTCTCTCGAGCTAGCGATGATATCTCTT
CCTGGCTTCCCAAACTTCACACTCTGCCTAATCCTAGTCAGAGCCAAAAG
GAGGTTATGCAACCAGGCTCCCGAGCCGCATTGGAAGTCGAAGCCGCCAG
TGTCATGGGTGTGCTACGCTACTTTGATCGGAGATTCGCCGACAAGTGAT
CTTCCTCTGCATTCTGTTACTCTACCTTTTTCTTCTTTCCACCTTTTTCT
TTTCGGCACCTTGTTGATTCTGCTTTTATTTCTCATGATACCCAACCCTG
ACTCATGGCATGTCTGAGTTTGTATTATATATACACACCTCACTCACATC
CCCTACCCTCATCTCGTGGACGAGAGAGACACCCCCTCCTCTGCCATAAT
ACCCGCACTCTTCCCATCTACTACCTCCTCCCCTAACATCCGCCCAGGGA
TTTATGAACCCTTCCCTTACAACCCACCCCACACAAAAAAAGAAGTGACC
ATGAAGGAGGGGAACTGGAACCTCAACAACCCAAAAATTCACTCATATGA
AAATCATTAAAAAGAGCTAAAATAATAACGACCGGACTGCCAGGAATGTC
TGTCTAGAGAACGGGACGAATTGAAGTTCGTTCCATATGATTACATTTAG
ACCGGGTGAAATGAAATAAATGATATGGCGTTTTTCTTACTTCTATTTAT
CTCTTTCCACATACATCATTTCGTGGTTCTAAAGTCTTTTTTGGATTTT
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Coding sequence (CDS) from alignment at ch1:1596566..1598964+

>KJC3_000698-T1 ID=KJC3_000698-T1|Name=KJC3_000698-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch1:1596566..1598964+ (Aspergillus niger KJC3)
ATGGCCACTCCAGCAGCTCCCTCACTCGCCCCTGCGCCCGGTCCAGCTCC
GTTGGCACCCGCATTGGCCGCCAAGCCAGCCATCTCACCGTCTCCCGGTC
CGGGCACACCCGGTTCCGTCACCTCCAAGGAATGGGTGATTCCCCCTCGT
CCCAAGCCCGGCCGCAAGCCCGCCACAGACACGCCCCCTACCAAACGCAA
AGCGCAGAATCGAGCTGCCCAGAGAGCTTTCCGCGAGCGTAGAGCAGCCC
GCGTCAACGAACTCGAGGACCAGATCAAGAAGATTGAAGACGACCATGAG
ATCCATGTGTTGCAACTCAAGGAGCAGATTTCGAACCTTTCCCATGAGGT
CGAACAATGTCGGAGCGAAATGGCCTGGTGGCGTGACCGTTGCCACGCTT
TGGAAAAAGAGGTCTCCGTCGAGCGCAGCGCTAAAGAAAGCCTCGTGAAG
GAGTTCCGCTCCTCGTTGTCCGACAAGAATGCCTCTCGCTCCGACAAGGC
ACCCTTGACACGCATACCCAGAGACTCATCTGCAGCTCATGCGGCAGTTG
AGAACAACATGCACGAGGAGCGGGAGGAGGTGCCCCTGGGCTGTAGTAAC
TGCTCGAACGTGCACTGTCAGTGCATTGAAGACGCCTTTAGTGGCATGCC
CGGCATCGAACGGACTTCAGCCCAGTCAAAGCGTCCTGATAACTCGAGCC
AGTCTCATGCCGAACCTGAAATCAAGCCCGAGCCAGAGGAGATGGAGATC
GATTTCACAACGCGATTCGCGGCCCCTCATCACGTCCAGGACGACACTGT
CACTAACGTTTCCTCCCCCGCCGTCGATCCTTGTGGTTTCTGCCAGGATG
GCACGCCATGCATTTGTGCTGAAATGGCTGCCCAGGAAGAGGAGCGCCGG
CGGCGCAACTCGTTCGAGAACAACCGCCTGGCACCCATCCAGAACCTGTC
GCAGTTCACGCCGCCCCCTTCCGACGGCGATGTGCGGTCCGAGGTGACCC
TCCCCCCCATTAGCCAAGCGACAAATCCCTGCGCCAATGGCCCGGGTACT
TGTGCCCAATGTCTCGCCGATCCCAGGCGGACCCTTTTTTGCAAGACGCT
GGCGGCCTCCCGCCCCGCCAGCGCTGCTCCCTCCGGATGTTGCGGCGGTA
AAGGCGCTGATGGTGGATGCTGCATGTCACGCAACTCCAACCCTCAACGC
AGCGGGTCGACTCAACAACAATCACAGACTTCCAGCTCGCGCCGCTCGGC
GACTCCATCCCTGACTCTCTCCTGTGCCGACGCCTTCACTACCCTCTCCC
GCCACCCGAACTTCTCTCGAGCTAGCGATGATATCTCTTCCTGGCTTCCC
AAACTTCACACTCTGCCTAATCCTAGTCAGAGCCAAAAGGAGGTTATGCA
ACCAGGCTCCCGAGCCGCATTGGAAGTCGAAGCCGCCAGTGTCATGGGTG
TGCTACGCTACTTTGATCGGAGATTCGCCGACAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000698KJC3_000698Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000698-T1.utr5p1KJC3_000698-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000698-T1.exon1KJC3_000698-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000698-T1.cdsKJC3_000698-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000698-T1.utr3p1KJC3_000698-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000698-T1KJC3_000698-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018287
DBxrefInterPro:IPR004827
DBxrefPFAM:PF10297
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1596566..1598964 +
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