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KJC3_000702-T1, KJC3_000702-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000702-T1
Unique NameKJC3_000702-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1603425..1605659+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000702-T1 ID=KJC3_000702-T1|Name=KJC3_000702-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2235bp|location=Sequence derived from alignment at ch1:1603425..1605659+ (Aspergillus niger KJC3)
GATTGGTCGCGGGGCTCTCCGCATCGCTTCGCCCGCGCAGTTGGCCTCTC
AGTCCATCGATTCATCCATCTCGCTGCATCCTCCATTCGTTTTCTCCTGT
CCTCTCTGCCACCTTTCACGATTTCTGGCAGCAAGTGACGCATATTTTAA
TCTGTACATGCTTTAATTTGATTTACCTCCTTTCGACAAGAACTCCCCCG
CCATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGAC
CTGACTCGCTCTAACAATTTGGACGAGAAGGTGAGGATCAGCACTTTTCT
CTCTGTCTGATGTATGTACTGACTGTTAGCAGGCCTTTGATGACATGATC
AAAGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGT
CCAGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTC
CTCCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAG
CTGGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGG
CCGCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCA
CCACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACC
GCCCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAA
ACAGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAA
CCGACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAG
CGTTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGA
AGAGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACC
AGACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAG
TCCTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAA
GACGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCA
CACACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTG
GAACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGA
TATGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCT
CCGCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGC
GACTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAA
GCTCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATG
ACGAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGC
ATGACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCC
TAGCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAG
TCGAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGC
GTCGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGG
CGGTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCA
TGGGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGAC
ATGGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGG
TGGTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGA
TGAGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGA
CGGTGATTGTGATGATGACGATGATGCACGCATTCTGAAATTCCTTCTTG
ACTTTTGATTTCGCGTTGTTACCATTCCATGATTATATTCTACACCTGTG
CTCCGTCTCTTTTTTACGTTTGATTCTTAAGAGACTGGGATATATGGCCT
TGCTTCAGTTCAGTCATCATTCACCTCATTCGTCGATTGTAACTAGCATA
TGATGGTGTTGGGCGTGACTTGATTTTACTTGTGCTTACCTCTTTGCTAA
TATCCGACTGGCCCTCTGGGGCATCAAATCTATGCTATCAAAGCTCATTT
CCCATTCTTTCCAGGTGATATAATAAGTATTAGACTGGGAAAATATATCT
ACAGTATCTAGGTTGATTGTGGTTGCAGATACCAG
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Coding sequence (CDS) from alignment at ch1:1603425..1605659+

>KJC3_000702-T1 ID=KJC3_000702-T1|Name=KJC3_000702-T1|organism=Aspergillus niger KJC3|type=CDS|length=3204bp|location=Sequence derived from alignment at ch1:1603425..1605659+ (Aspergillus niger KJC3)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGATCAAAG
AGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCCAG
TCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCTCC
CGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCTGG
TTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCCGC
TCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACCAC
CTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGCCC
TTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAACAG
AATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACCGA
CCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCGTT
TCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAGAG
CTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAGAC
CATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTCCT
CCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGACG
GATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACACA
CACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGAAC
GTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATATG
GCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCCGC
CAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGACT
TCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGCTC
TCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGACGA
AGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCATGA
CGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTAGC
CGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTCGA
AGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGTCG
GCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCGGT
AACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATGGG
TGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACATGG
CCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTGGT
CTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATGAG
TGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACGGT
GAATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGAC
CTGACTCGCTCTAACAATTTGGACGAGAAGGCCTTTGATGACATGATCAA
AGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCC
AGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCT
CCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCT
GGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCC
GCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACC
ACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGC
CCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAAC
AGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAACC
GACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCG
TTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAG
AGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCAG
ACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTC
CTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAGA
CGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACA
CACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGGA
ACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATA
TGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCC
GCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCGA
CTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGC
TCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGAC
GAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCAT
GACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTA
GCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTC
GAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGT
CGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCG
GTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATG
GGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACAT
GGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTG
GTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGATG
AGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACG
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:00083127S RNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000702KJC3_000702Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000702-T1.utr5p1KJC3_000702-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000702-T1.exon1KJC3_000702-T1.exon1Aspergillus niger KJC3exon
KJC3_000702-T1.exon2KJC3_000702-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000702-T1.cdsKJC3_000702-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000702-T1.utr3p1KJC3_000702-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000702-T1KJC3_000702-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261V9P
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR036225
DBxrefInterPro:IPR022941
DBxrefInterPro:IPR036891
DBxrefInterPro:IPR004125
DBxrefInterPro:IPR042101
DBxrefInterPro:IPR006325
DBxrefInterPro:IPR013822
DBxrefInterPro:IPR000897
DBxrefInterPro:IPR003593
DBxrefPFAM:PF02978
DBxrefPFAM:PF02881
DBxrefPFAM:PF00448
DBxrefPFAM:PF02492
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1603425..1605659 +
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