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KJC3_000754-T1, KJC3_000754-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000754-T1
Unique NameKJC3_000754-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1764858..1766204-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000754-T1 ID=KJC3_000754-T1|Name=KJC3_000754-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1347bp|location=Sequence derived from alignment at ch1:1764858..1766204- (Aspergillus niger KJC3)
ATTTGAGTACCACTAGCAGAGCAATTACATTTAGCCATAGGAGATCTAGC
TTCGTCATAAGGACTCCCATGGCTGATTCTCATTGATAACCCTTTATTTG
AACAAGCAAGCATTTGATAATCTCCATTAGGTACCAGTGATTTCTCACTT
ATTTTGCCATCATGAATATCTTCAGGTTATTAGGTGAGTTGTTTGTTCGC
TCTCAGTTCAATTGACGCACCATGCTAATTCTTACAAACAAGCCGACTTT
TCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAG
TGTATGCTGTCATTAAAACGGATTCTTAGCATTTTTCTGACTGGATCCAG
AGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTT
TGTAACGCGTTATCTTGGTAAGCTTCAGGGATTCAATACTCGATTGTATA
GGTCTAGCTCTCTGACTGGTTTCTGATCACAGATTTATTCTGGGCTTTCA
CGGACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCA
GCTTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCC
CAACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGT
TGGCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGGTAAACCCCCTG
GCAGGACATTTGTCACACCTCATCTGACCTTTCTAGATTCTTTGGACGTT
CTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTC
AGCGCACTGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTG
GGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGC
AGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACAC
TCTTATATTCTGATTTCTTTTATATCTATTACACCAAGTGAGTCCCAGCA
AGTTTCCTCTATCAGTACCCAGGGGCGCTAACTGTCATACAGGGTTATGA
AGGGTAAGAAGTTCTCATTGCCTGTTTAAGTTCGGCGTACATGGTGACTG
GTTTCGTCATAAACGGCGTTGCAAGTTCCGAGGAGGATAGCCAGCCGTTG
GAGGAGAATAGTGTGTCTATCTACCATTGAATTTCAACTTTCCTTCAGCA
ATAGGTACTTTTCTTGAGGTAGTTAACATTCACACACAACTGATCTTGGT
CGGTACGCACTATAGACTTGTCCAACCCCTGCGAGGGGACAAGTCGTCTA
GCGTCTTTATAATTATAGTCTCGGTGATGGTCTAGTCCAATACAATG
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Coding sequence (CDS) from alignment at ch1:1764858..1766204-

>KJC3_000754-T1 ID=KJC3_000754-T1|Name=KJC3_000754-T1|organism=Aspergillus niger KJC3|type=CDS|length=3852bp|location=Sequence derived from alignment at ch1:1764858..1766204- (Aspergillus niger KJC3)
GGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGT
TCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTT
CAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTT
GGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCG
CAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACA
CTCTTATATTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGG
CTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGC
TCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCA
TGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTG
CTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGC
TCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAAC
GCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGC
AGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGA
AGGGTAAGAAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATA
TGGCTCGAGTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCAC
TGGGGAGGCGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGT
ATCGTGCCCTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGC
CACTTTCAGCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATA
TTCTGATTTCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACG
GACTCTTTCTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGC
TTATATCATCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCA
ACACTGATACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTG
GCTCTCCTTTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCT
TTCATTCAAGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATC
TTGCCGACTTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATG
AAGTCTTCAAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAG
AAGTTCTCATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGA
GTCCGTGGCTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGG
CGGACACCATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCC
CTTTACATCCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCA
GCCTATCCCTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATT
TCTTTTATATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTT
CTATAATACGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCA
TCTACCTCATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGAT
ACCTTTAAAGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCT
TTTCCCGCACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCA
AGTCCCAGGCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGAC
TTTTCCCATCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTC
AAGTATGAATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTC
ATTGCCTGTTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGG
CTATTTTGCCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACC
ATAACAACGCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACAT
CCCCAATTGGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCC
CTGTTGTAGCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTAT
ATCTATTACACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATA
CGACTTTTAAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTC
ATGCTCAACGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAA
AGTGCAGTATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGC
ACGACTATAGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAG
GCGCTATATTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCA
TCTTGCGTCTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGA
ATATCTTCAGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTG
TTTAAATTCTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTG
CCCCAGCTTTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAAC
GCATTATCTTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATT
GGATTTATCGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTA
GCCGGTATCATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTA
CACCAAATTTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTT
AAAATCCTGTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAA
CGACTATAAGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGT
ATCTCCTCGGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTAT
AGCGTCTCAGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATA
TTTGATGGTTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGT
CTATATTCATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTC
AGGTTATTAGGGTTATGAAGGGTAAGAAGTTCTCATTGCCTGTTTAAATT
CTTTGGACGTTCTCTATATGGCTCGAGTCCGTGGCTATTTTGCCCCAGCT
TTTCATGCTTCAGCGCACTGGGGAGGCGGACACCATAACAACGCATTATC
TTTTCGCTTTGGGATTGTATCGTGCCCTTTACATCCCCAATTGGATTTAT
CGCTATTTCGCAGAGAGCCACTTTCAGCCTATCCCTGTTGTAGCCGGTAT
CATCCAGACACTCTTATATTCTGATTTCTTTTATATCTATTACACCAAAT
TTATTCTGGGCTTTCACGGACTCTTTCTATAATACGACTTTTAAAATCCT
GTTCATCGGCTCGTCAGCTTATATCATCTACCTCATGCTCAACGACTATA
AGCCAACGCATGACCCCAACACTGATACCTTTAAAGTGCAGTATCTCCTC
GGGTTCAGTGCTTTGTTGGCTCTCCTTTTCCCGCACGACTATAGCGTCTC
AGAGAGTTGCTCAGGGCTTTCATTCAAGTCCCAGGCGCTATATTTGATGG
TTTTTGTAACGCGTTATCTTGCCGACTTTTCCCATCTTGCGTCTATATTC
ATATTATTGCAGAAGATGAAGTCTTCAAGTATGAATATCTTCAGGTTATT
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046923ER retention sequence binding
Vocabulary: Biological Process
TermDefinition
GO:0006621protein retention in ER lumen
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KDELR2KJC3_000754Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000754-T1KJC3_000754-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000754-T1.cdsKJC3_000754-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000754-T1.utr3p1KJC3_000754-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000754-T1.exon6KJC3_000754-T1.exon6Aspergillus niger KJC3exon
KJC3_000754-T1.exon5KJC3_000754-T1.exon5Aspergillus niger KJC3exon
KJC3_000754-T1.exon4KJC3_000754-T1.exon4Aspergillus niger KJC3exon
KJC3_000754-T1.exon3KJC3_000754-T1.exon3Aspergillus niger KJC3exon
KJC3_000754-T1.exon2KJC3_000754-T1.exon2Aspergillus niger KJC3exon
KJC3_000754-T1.exon1KJC3_000754-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000754-T1.utr5p1KJC3_000754-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000133
DBxrefPFAM:PF00810
ProductER lumen protein-retaining receptor 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1764858..1766204 -
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