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KJC3_000763-T1, KJC3_000763-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000763-T1
Unique NameKJC3_000763-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1878563..1879432+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000763-T1 ID=KJC3_000763-T1|Name=KJC3_000763-T1|organism=Aspergillus niger KJC3|type=mRNA|length=870bp|location=Sequence derived from alignment at ch1:1878563..1879432+ (Aspergillus niger KJC3)
ATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCA
CCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAA
AGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAA
AGGTCGGTTGAGCTCCCATTGAACCAGGTTTTAATGCTGAAACTAATGGA
AATCAAAGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACAT
CTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTGATCTCCC
TATGAATAAAGCTTGTAAACTCTCTAGACTTATGCTCTCCTAGGTGCCTA
GGCTGACGCCTCACTAGTCATGACAAACAGGGGCACCGCATACATACTTT
ACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCT
CAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGAGAGC
CTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTTGGCC
GTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCG
CCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGA
CATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTC
GATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACA
CATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTA
CAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGAGTC
CAAGAAGAGACCATCATTGA
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Coding sequence (CDS) from alignment at ch1:1878563..1879432+

>KJC3_000763-T1 ID=KJC3_000763-T1|Name=KJC3_000763-T1|organism=Aspergillus niger KJC3|type=CDS|length=2295bp|location=Sequence derived from alignment at ch1:1878563..1879432+ (Aspergillus niger KJC3)
ATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCGTCGCACAACCAAGCA
CCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAGACGTTACAGGAAAAA
AGACTACAGCCGGACTCCGAGTCCCTCTGCCGATGCTTCAAGAAGCTCAA
AGGTCGATAGTTATCGAAAAGTTGACTAAAAATGTCACCGAATCACATCT
CCGGGAGATATTCGGTGGTTTTGGCGACATACAAAGTCTTGATCTCCCTA
TGAATAAAGCTTTCATGACAAACAGGGGCACCGCATACATACTTTACCAC
GATCCTGCGGATGCAGAGGCGGCCATCGCGCATATGCACGAGGCTCAGCT
AGATGGTGCCATGCTGAACGTGTCGATTGTTCTTCCTAGGAGAGCCTTCT
CTCGCTCACCACCACCAGTTCAACATAGCAGAGGAAGCTTTGGCCGTCCA
GGACACGGCCGCGGACCTCCGTCGGATAGTCGCGCTCCAAGGTCGCCGCC
ACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGGAAAGGCATGACATCT
ATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCACGCCGTTCTCGATCC
CTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCCAAGACGGACACATTC
GCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTAGCCCGAGCTACAGCA
GCTATGGCTATAGCAGTCGCAGTGATAGGGACCGGAGTATGAGTCCAAGA
AGAGACCATCATTGAATGCTCACCGTTCCAGAAGCTGGTCGCGATCATCG
TCGCACAACCAAGCACCATCCCGTAGTCGAAGCCGAAGTGAAACTCCCAG
ACGTTACAGGAAAAAAGACTACAGCCGGACTCCGAGTCCCTCTGCCGATG
CTTCAAGAAGCTCAAAGGTCGATAGTTATCGAAAAGTTGACTAAAAATGT
CACCGAATCACATCTCCGGGAGATATTCGGTGGTTTTGGCGACATACAAA
GTCTTGATCTCCCTATGAATAAAGCTTTCATGACAAACAGGGGCACCGCA
TACATACTTTACCACGATCCTGCGGATGCAGAGGCGGCCATCGCGCATAT
GCACGAGGCTCAGCTAGATGGTGCCATGCTGAACGTGTCGATTGTTCTTC
CTAGGAGAGCCTTCTCTCGCTCACCACCACCAGTTCAACATAGCAGAGGA
AGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCCGTCGGATAGTCGCGC
TCCAAGGTCGCCGCCACCCGCTAGGAGGTATCGCCGTTCTCGGCATATGG
AAAGGCATGACATCTATAGGCCTCGCTCTCTGTCGCGCTCCAGGTCGCCA
CGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTCAAACTCCCCACCGCC
AAGACGGACACATTCGCGTATGGACAGCTCTCAGCGTCGCCGTCGCCGTA
GCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGCAGTGATAGGGACCGG
AGTATGAGTCCAAGAAGAGACCATCATTGAATGCTCACCGTTCCAGAAGC
TGGTCGCGATCATCGTCGCACAACCAAGCACCATCCCGTAGTCGAAGCCG
AAGTGAAACTCCCAGACGTTACAGGAAAAAAGACTACAGCCGGACTCCGA
GTCCCTCTGCCGATGCTTCAAGAAGCTCAAAGGTCGATAGTTATCGAAAA
GTTGACTAAAAATGTCACCGAATCACATCTCCGGGAGATATTCGGTGGTT
TTGGCGACATACAAAGTCTTGATCTCCCTATGAATAAAGCTTTCATGACA
AACAGGGGCACCGCATACATACTTTACCACGATCCTGCGGATGCAGAGGC
GGCCATCGCGCATATGCACGAGGCTCAGCTAGATGGTGCCATGCTGAACG
TGTCGATTGTTCTTCCTAGGAGAGCCTTCTCTCGCTCACCACCACCAGTT
CAACATAGCAGAGGAAGCTTTGGCCGTCCAGGACACGGCCGCGGACCTCC
GTCGGATAGTCGCGCTCCAAGGTCGCCGCCACCCGCTAGGAGGTATCGCC
GTTCTCGGCATATGGAAAGGCATGACATCTATAGGCCTCGCTCTCTGTCG
CGCTCCAGGTCGCCACGCCGTTCTCGATCCCTTTCTTCCAAGTCTCTCTC
AAACTCCCCACCGCCAAGACGGACACATTCGCGTATGGACAGCTCTCAGC
GTCGCCGTCGCCGTAGCCCGAGCTACAGCAGCTATGGCTATAGCAGTCGC
AGTGATAGGGACCGGAGTATGAGTCCAAGAAGAGACCATCATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000763KJC3_000763Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000763-T1.exon1KJC3_000763-T1.exon1Aspergillus niger KJC3exon
KJC3_000763-T1.exon2KJC3_000763-T1.exon2Aspergillus niger KJC3exon
KJC3_000763-T1.exon3KJC3_000763-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000763-T1.cdsKJC3_000763-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000763-T1KJC3_000763-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034201
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1878563..1879432 +
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