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KJC3_000767-T1, KJC3_000767-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000767-T1
Unique NameKJC3_000767-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1891508..1892774+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000767-T1 ID=KJC3_000767-T1|Name=KJC3_000767-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1267bp|location=Sequence derived from alignment at ch1:1891508..1892774+ (Aspergillus niger KJC3)
ATTAGCTGAGAGCCTGGCACGCGTCTCGAGTGACGCGTAACTTTATCCGT
TCACAGCTGTTCGCGATGGTCATATTTGCGAGTTCCTATCGAAGTATGCG
TACTGCTTGCTCGGTCAACAAAAATAAAATCATCTGAGAAGGCTGTAATT
TTCACCATCTTTAAGACATCAGGAGGTTCATCGGAAAATGGAAAAAGATG
TGGGCTACTCAAACCCATCAATGGATCAGGATGATACATTGTTCGATTAT
GATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTGTGGATCCCAAGAG
GGATGAACCTATTGCTGCACCAGTATTAGGGCTGGATGAAAAGGTCACAA
TCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGAGAGCCGGTGAGAC
TGACATCCGGCGTAGCGCTCTGAATACAGGCTTATTGCTTCCTAGGTTAC
TGTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGAAGTCGAAACTG
AAATTCAAAGGCAAAGGGCATGAGGTCTGCTAGAACCGATTTGTGTAGTC
GCCGAGGGACCACTGCGTGGCTAACTGTTTTTCAAAGTTTTCGGATGCCG
CTCGACTCTTAAATTTTTATCAACTATGGCTCGATGATTTGTTCCCTCGT
GCGAAGTTCGCCGATGGATTGGCTATGATAGAGAAACTGGGTCACTCGAA
ACGCTTGCAGACGATGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGAC
TTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCA
CATACCCGTGACAATAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGC
TATCATAGGCCGAGGAGATAACGTGGCACAGGCGCCCCCAACACAGGGCC
TTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCTACAACAGGAGGAT
TTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGG
TGCTCATGAAAATAATGATGATGATGATGATGATGATGATGAGCTGGAAG
CACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAATAATCTGGCA
GGATCAGATATAAGGGCTTGACTCAGTAGGCCTATAGGTAACCTGGGTCC
TTTAAATGACATCGATATTTTGAGGATTACAACTACTCAATGCACTAATA
CATGATTCATACAGTGGGCGAATTGTTTATACATAGCGTAAATTCCACAA
GAACGGTCTACGAACCA
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Coding sequence (CDS) from alignment at ch1:1891508..1892774+

>KJC3_000767-T1 ID=KJC3_000767-T1|Name=KJC3_000767-T1|organism=Aspergillus niger KJC3|type=CDS|length=2457bp|location=Sequence derived from alignment at ch1:1891508..1892774+ (Aspergillus niger KJC3)
ATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGGATCAGGATGATAC
ATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTG
TGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGGCTGGAT
GAAAAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGA
GAGCCGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGA
AGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGTTTTCGGATGCCGCT
CGACTCTTAAATTTTTATCAACTATGGCTCGATGATTTGTTCCCTCGTGC
GAAGTTCGCCGATGGATTGGCTATGATAGAGAAACTGGGTCACTCGAAAC
GCTTGCAGACGATGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGACTT
TCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCACA
TACCCGTGACAATAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGCTA
TCATAGGCCGAGGAGATAACGTGGCACAGGCGCCCCCAACACAGGGCCTT
GGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCTACAACAGGAGGATTT
GTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGGTG
CTCATGAAAATAATGATGATGATGATGATGATGATGATGAGCTGGAAGCA
CTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAATAATCTGGCAGG
ATCAGATATAAGGGCTTGAATGGAAAAAGATGTGGGCTACTCAAACCCAT
CAATGGATCAGGATGATACATTGTTCGATTATGATGCCGGCTTAGAGGGC
ACATTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTATTGCTGC
ACCAGTATTAGGGCTGGATGAAAAGGTCACAATCACTAAGCAGCGACGAT
TTACAGTCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCGGAATACCA
AAACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCAAAGGGCA
TGAGTTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCG
ATGATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAG
AAACTGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGA
CGAGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAG
CGAAATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCAT
CTTGAAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGC
GCCCCCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCA
TTCTACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGG
GAAATCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGA
TGATGATGAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTG
GTAACAATAATCTGGCAGGATCAGATATAAGGGCTTGAATGGAAAAAGAT
GTGGGCTACTCAAACCCATCAATGGATCAGGATGATACATTGTTCGATTA
TGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTGTGGATCCCAAGA
GGGATGAACCTATTGCTGCACCAGTATTAGGGCTGGATGAAAAGGTCACA
ATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGAGAGCCGGTTACT
GTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGAAGTCGAAACTGA
AATTCAAAGGCAAAGGGCATGAGTTTTCGGATGCCGCTCGACTCTTAAAT
TTTTATCAACTATGGCTCGATGATTTGTTCCCTCGTGCGAAGTTCGCCGA
TGGATTGGCTATGATAGAGAAACTGGGTCACTCGAAACGCTTGCAGACGA
TGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGACTTTCCGCAGCTGAC
TCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCACATACCCGTGACAA
TAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGCTATCATAGGCCGAG
GAGATAACGTGGCACAGGCGCCCCCAACACAGGGCCTTGGAGAGCCATCT
TCACTTCTGCTAGGAGGCATTCTACAACAGGAGGATTTGTTTGTGTCTGA
TGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGGTGCTCATGAAAATA
ATGATGATGATGATGATGATGATGATGAGCTGGAAGCACTTCTTCGGGAG
CACGAGGATGGTTTTATTGGTAACAATAATCTGGCAGGATCAGATATAAG
GGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006974cellular response to DNA damage stimulus
GO:0048478replication fork protection
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000767KJC3_000767Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000767-T1KJC3_000767-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000767-T1.utr5p1KJC3_000767-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000767-T1.exon1KJC3_000767-T1.exon1Aspergillus niger KJC3exon
KJC3_000767-T1.exon2KJC3_000767-T1.exon2Aspergillus niger KJC3exon
KJC3_000767-T1.exon3KJC3_000767-T1.exon3Aspergillus niger KJC3exon
KJC3_000767-T1.exon4KJC3_000767-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000767-T1.cdsKJC3_000767-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000767-T1.utr3p1KJC3_000767-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_000767-T1.utr3p2KJC3_000767-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012923
DBxrefPFAM:PF07962
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1891508..1892774 +
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