|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1895324..1897798- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000769-T1 ID=KJC3_000769-T1|Name=KJC3_000769-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2475bp|location=Sequence derived from alignment at ch1:1895324..1897798- (Aspergillus niger KJC3)
CCCGAACTCTTTCGGCTGAGGAAGAACGCCTATAAGTGAATGGTTTGCAT
TAATAGACAGCAGGCATCACGTTTTTCATGACAGCAGTACAACAGGCACA
TCGTTCTTGAGCCATGAATTGAGCAGGCTAGCTGCGGGGCCCTTTCGACC
CGATATTGGACCACACTGTACGTGTCTTAAGCTGCCCTTGGTCAAGCCTC
AGAATCTCCAATGTTCGACATGGAACATGACCACTCAGACGCGTCTTATA
CGAGTACGAAATCATTATCACCTGATTCTGGGTCAGGGTCATCGCACGCT
GATGCTTCGAACCGTGCAAAAGGTGGATTAGAAGAAGCTACATTGAACGG
ACGCATGGTGACTTTTTACGAGAATGACAACAACCGCAACCACAATGATA
ATACAACGCCCACCGAACCCATACTCCGCGATGCGGTTCTCGAAACCGAC
CACTTCTCTGGGACTGCGGCGGGGTCTGCAAGACCAGAGGAATCGGATGT
ACAAGGACCCATACAGCTAGGAAGCGACCACAACTCCGCGAGCGACCATA
TCCCTAGAGAGCCAGATGCCGATGATCCCGGCCGTGACTCCCGGTCAAGG
GACTCAAGCTCGGCCACGAACCACAATCTCATCAACAATCCCCCAAATCT
TGCACGGATACGCCAAGTAATGTTCGAGTGCAAGGATCCCATAGAGATCA
GCCTGGAGGAATTTGAGACTTATTGGCCGTTCATCGACAATGTATGGGTC
AAACAGAGGTCTAATTCCAGCAAAGAAGGGCATTGCACTACGGACTATTA
TATGTGTCGACTGCGACGCCCCACTCATCGTACGTCAGAAACTCGGCCTC
TTCCTGAAGGCAAACGCCCTCGAAAGAAGAGGGTGCGGGAGGGTGGTATC
TGCAACTTCCAAATCAAAGTTGTCAAATTTGAAGGAGCATATTCGACGGT
GACAATTGCGAGGACTCCAGGGAGCAGTCAGGTACATTCGCATGATCTCG
ATTATATTGACCGAGTGAAGCGAAATTCTGGACTAATGGAGTTTGCGCGG
AGGGAAGCAATCAAGGGCTATTTGCCTTCCTCGATCTTCACGAAGTTCCA
GGAAGAACCTGAAAAGCTAATTGAAGCTGGGGGGAAATTTTGTACAGTGA
CGGACGTGCGCAACGTCTCGGCGAAGTGGAGGATACAGAACCCCGACGTT
AAACTTGTGGCGCATGAAGGCTATGAATATCACAAGGGTCATGGCATTGT
GAGGATGCGAGCGGCTGATGGTATCAGCAATACCCCGGGCGACAAGTTAC
TATCGAATGCAGCCATACACTCATCCTTACCCCCGGATACGCTCTCCTTC
CCTCAGTTTCCTTTAGAATTTCTTGAGCCTTATCTTCCAAAGCACAATGA
TCGACGCCAGTTCCCTCATGTCACCCTATCCTATGCATCGTCGATGGACT
CTAAGATATCACTCCTTCCAGGCATGCAGACTGTTCTATCTGGACCAGAG
GCCAAACTGATGACCCACTATCTCAGGTCACGCCATGACGCGATCCTCAT
TGGAGTTGGAACAGTGCTTGCAGACAACCCCGGGCTAAACTGTAGGCTGG
AAGGTGCAGGCGGGTTCGGTGGCCTTGGAAGGATGTGGCAACCGCGGCCA
GTGGTAGTCGATCCCACAGGACGATGGCCCGTACATCCAGACTGCCGAAT
GCTAAGGACTGCAGTAGAAGGGAAAGGCAAGGCGCCGTGGGTAGTGGTAT
CTCCGGGGGCCAGGATTGACCCGCAGAAGTTGATGATGCTGAAAGGCTAC
GGGGGTGATTACCTCCGTATCATGGAGTACAATCAAAACTGGCGGCTGCG
CTGGGAAGCCATACTACGTGCGCTGGCATCTGAGGGGATCAAAAGCGTCA
TGATCGAAGGCGGCGGGACCGTTTTGAGTGAGCTTTTGAACCCCGAATAC
ACCGAATTCATTGATACTATCATTGTTACTGTCGCCCCAACCTATCTTGG
TTCTGGTGGAGTAAGTGTGAGCCCAGATTCCAAGCGGGATCAAGAAGGCA
AGCCAAACGCTGCTCTGAACCCTAGGGATGTGAAATGGACGCCCCTGGGT
CAGAACGTTATAATGTGTGGGAGAATACGGGTTGCGCCCCCTGCAGAGTC
CCCTGCTACCAATGTCGAGTCGTAAAACATACCATTGTTGTTGAGAACAG
AAGGTATGCCCAAAACCCAAGGTGGCTGTCAGCGGAGTCACGATGAATGT
TCTACAGTAACAGTCGCGAGGATTGCCTTCTGCAACACATGGCAGCTTGG
CGAGAGATAGCAGTCCCTACTAGTAGTAGTCAAGAATGTCCGAGCAATGG
AAGGGGTTGAGCTCCCGGAGAGAACCAACTTCATGCAGGCGTTTCTAGGC
CGGTACTACAGTCTATTACATACTTCAGGGCACAAAGATAGACGAAAACT
AAAATAATATAATAAAATATAAAGG back to topCoding sequence (CDS) from alignment at ch1:1895324..1897798- >KJC3_000769-T1 ID=KJC3_000769-T1|Name=KJC3_000769-T1|organism=Aspergillus niger KJC3|type=CDS|length=3798bp|location=Sequence derived from alignment at ch1:1895324..1897798- (Aspergillus niger KJC3)
AATGACAACAACCGCAACCACAATGATAATACAACGCCCACCGAACCCAT
ACTCCGCGATGCGGTTCTCGAAACCGACCACTTCTCTGGGACTGCGGCGG
GGTCTGCAAGACCAGAGGAATCGGATGTACAAGGACCCATACAGCTAGGA
AGCGACCACAACTCCGCGAGCGACCATATCCCTAGAGAGCCAGATGCCGA
TGATCCCGGCCGTGACTCCCGGTCAAGGGACTCAAGCTCGGCCACGAACC
ACAATCTCATCAACAATCCCCCAAATCTTGCACGGATACGCCAAGTAATG
TTCGAGTGCAAGGATCCCATAGAGATCAGCCTGGAGGAATTTGAGACTTA
TTGGCCGTTCATCGACAATGTATGGGTCAAACAGAGGTCTAATTCCAGCA
AAGAAGGGCATTGCACTACGGACTATTATATGTGTCGACTGCGACGCCCC
ACTCATCGTACGTCAGAAACTCGGCCTCTTCCTGAAGGCAAACGCCCTCG
AAAGAAGAGGGTGCGGGAGGGTGGTATCTGCAACTTCCAAATCAAAGTTG
TCAAATTTGAAGGAGCATATTCGACGGTGACAATTGCGAGGACTCCAGGG
AGCAGTCAGGTACATTCGCATGATCTCGATTATATTGACCGAGTGAAGCG
AAATTCTGGACTAATGGAGTTTGCGCGGAGGGAAGCAATCAAGGGCTATT
TGCCTTCCTCGATCTTCACGAAGTTCCAGGAAGAACCTGAAAAGCTAATT
GAAGCTGGGGGGAAATTTTGTACAGTGACGGACGTGCGCAACGTCTCGGC
GAAGTGGAGGATACAGAACCCCGACGTTAAACTTGTGGCGCATGAAGGCT
ATGAATATCACAAGGGTCATGGCATTGTGAGGATGCGAGCGGCTGATGGT
ATCAGCAATACCCCGGGCGACAAGTTACTATCGAATGCAGCCATACACTC
ATCCTTACCCCCGGATACGCTCTCCTTCCCTCAGTTTCCTTTAGAATTTC
TTGAGCCTTATCTTCCAAAGCACAATGATCGACGCCAGTTCCCTCATGTC
ACCCTATCCTATGCATCGTCGATGGACTCTAAGATATCACTCCTTCCAGG
CATGCAGACTGTTCTATCTGGACCAGAGGCCAAACTGATGACCCACTATC
TCAGGTCACGCCATGACGCGATCCTCATTGGAGTTGGAACAGTGCTTGCA
GACAACCCCGGGCTAAACTGTAGGCTGGAAGGTGCAGGCGGGTTCGGTGG
CCTTGGAAGGATGTGGCAACCGCGGCCAGTGGTAGTCGATCCCACAGGAC
GATGGCCCGTACATCCAGACTGCCGAATGCTAAGGACTGCAGTAGAAGGG
AAAGGCAAGGCGCCGTGGGTAGTGGTATCTCCGGGGGCCAGGATTGACCC
GCAGAAGTTGATGATGCTGAAAGGCTACGGGGGTGATTACCTCCGTATCA
TGGAGTACAATCAAAACTGGCGGCTGCGCTGGGAAGCCATACTACGTGCG
CTGGCATCTGAGGGGATCAAAAGCGTCATGATCGAAGGCGGCGGGACCGT
TTTGAGTGAGCTTTTGAACCCCGAATACACCGAATTCATTGATACTATCA
TTGTTACTGTCGCCCCAACCTATCTTGGTTCTGGTGGAGTAAGTGTGAGC
CCAGATTCCAAGCGGGATCAAGAAGGCAAGCCAAACGCTGCTCTGAACCC
TAGGGATGTGAAATGGACGCCCCTGGGTCAGAACGTTATAATGTGTGGGA
GAATACGGGTTGCGCCCCCTGCAGAGTCCCCTGCTACCAATGTCGAGTCG
TAAATGACCACTCAGACGCGTCTTATACGAGTACGAAATCATTATCACCT
GATTCTGGGTCAGGGTCATCGCACGCTGATGCTTCGAACCGTGCAAAAGA
ATGACAACAACCGCAACCACAATGATAATACAACGCCCACCGAACCCATA
CTCCGCGATGCGGTTCTCGAAACCGACCACTTCTCTGGGACTGCGGCGGG
GTCTGCAAGACCAGAGGAATCGGATGTACAAGGACCCATACAGCTAGGAA
GCGACCACAACTCCGCGAGCGACCATATCCCTAGAGAGCCAGATGCCGAT
GATCCCGGCCGTGACTCCCGGTCAAGGGACTCAAGCTCGGCCACGAACCA
CAATCTCATCAACAATCCCCCAAATCTTGCACGGATACGCCAAGTAATGT
TCGAGTGCAAGGATCCCATAGAGATCAGCCTGGAGGAATTTGAGACTTAT
TGGCCGTTCATCGACAATGTATGGGTCAAACAGAGGTCTAATTCCAGCAA
AGAAGGGCATTGCACTACGGACTATTATATGTGTCGACTGCGACGCCCCA
CTCATCGTACGTCAGAAACTCGGCCTCTTCCTGAAGGCAAACGCCCTCGA
AAGAAGAGGGTGCGGGAGGGTGGTATCTGCAACTTCCAAATCAAAGTTGT
CAAATTTGAAGGAGCATATTCGACGGTGACAATTGCGAGGACTCCAGGGA
GCAGTCAGGTACATTCGCATGATCTCGATTATATTGACCGAGTGAAGCGA
AATTCTGGACTAATGGAGTTTGCGCGGAGGGAAGCAATCAAGGGCTATTT
GCCTTCCTCGATCTTCACGAAGTTCCAGGAAGAACCTGAAAAGCTAATTG
AAGCTGGGGGGAAATTTTGTACAGTGACGGACGTGCGCAACGTCTCGGCG
AAGTGGAGGATACAGAACCCCGACGTTAAACTTGTGGCGCATGAAGGCTA
TGAATATCACAAGGGTCATGGCATTGTGAGGATGCGAGCGGCTGATGGTA
TCAGCAATACCCCGGGCGACAAGTTACTATCGAATGCAGCCATACACTCA
TCCTTACCCCCGGATACGCTCTCCTTCCCTCAGTTTCCTTTAGAATTTCT
TGAGCCTTATCTTCCAAAGCACAATGATCGACGCCAGTTCCCTCATGTCA
CCCTATCCTATGCATCGTCGATGGACTCTAAGATATCACTCCTTCCAGGC
ATGCAGACTGTTCTATCTGGACCAGAGGCCAAACTGATGACCCACTATCT
CAGGTCACGCCATGACGCGATCCTCATTGGAGTTGGAACAGTGCTTGCAG
ACAACCCCGGGCTAAACTGTAGGCTGGAAGGTGCAGGCGGGTTCGGTGGC
CTTGGAAGGATGTGGCAACCGCGGCCAGTGGTAGTCGATCCCACAGGACG
ATGGCCCGTACATCCAGACTGCCGAATGCTAAGGACTGCAGTAGAAGGGA
AAGGCAAGGCGCCGTGGGTAGTGGTATCTCCGGGGGCCAGGATTGACCCG
CAGAAGTTGATGATGCTGAAAGGCTACGGGGGTGATTACCTCCGTATCAT
GGAGTACAATCAAAACTGGCGGCTGCGCTGGGAAGCCATACTACGTGCGC
TGGCATCTGAGGGGATCAAAAGCGTCATGATCGAAGGCGGCGGGACCGTT
TTGAGTGAGCTTTTGAACCCCGAATACACCGAATTCATTGATACTATCAT
TGTTACTGTCGCCCCAACCTATCTTGGTTCTGGTGGAGTAAGTGTGAGCC
CAGATTCCAAGCGGGATCAAGAAGGCAAGCCAAACGCTGCTCTGAACCCT
AGGGATGTGAAATGGACGCCCCTGGGTCAGAACGTTATAATGTGTGGGAG
AATACGGGTTGCGCCCCCTGCAGAGTCCCCTGCTACCAATGTCGAGTCGT
AAATGACCACTCAGACGCGTCTTATACGAGTACGAAATCATTATCACCTG
ATTCTGGGTCAGGGTCATCGCACGCTGATGCTTCGAACCGTGCAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0009231 | riboflavin biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000769-T1.utr3p1 | KJC3_000769-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000769-T1.utr5p1 | KJC3_000769-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024072 |
| DBxref | InterPro:IPR002734 |
| DBxref | PFAM:PF01872 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1895324..1897798 - |
|
