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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1911403..1913776+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000775-T1 ID=KJC3_000775-T1|Name=KJC3_000775-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2374bp|location=Sequence derived from alignment at ch1:1911403..1913776+ (Aspergillus niger KJC3)
TGATAAATTGGAGCCTGAATCGGTGCGTCCCATCGATCATTTAACCTCTC
CTGATTACCCCCTTTGTCCCTCCCTGTTCTCCAATTGCACGTCTATCATT
TTTGTCAACCCATCAATCATTTCTTTCGTCCCGCAGGCGCCTCACAAAGT
CAGTCAGCTGCAAGTCCACGTCTGTGTCGTAAGCAATCAATTGGCTGCAA
TACCCATCATTCGCACAAATCATCCCCCCCGCCTCTCCTTCTTTTCTTTC
GCCCACCTCTTTACAATTGCCGTGCTTAGATTCGTGCCCCATTATCGTAC
AGAAATAGACCTTTTCGGTTCGATCATAGTGTCTCTTGCCTTCCCTATTC
CAACTCCATGGCTTCTATACCCCAGATGCCTTATCGACGACCCTCTCGGC
AGGGTTCTAGGCAGGCGTCGATAGATACGCGGGATGAGATACAGGTCCGC
GTAGACCACTACATTGGAATTGATGTTGGGACTGGCAGTGCCCGCGCTTG
TATAATCGATAGCAAAGGCGATATTGTCGGCCTAGCCTCTGAGAACATTG
GTCTTTGGCAACCTCAACAAGGATATTATGTACGTGTTCATGCTCAAGTT
TTCTTGCCCTGTCACTATCGTAAGGCTTTGTGTGGCCTCCGATTGACTCC
CTGTCATCCAGGAACAATCTACGAACGATATCTGGCGATGCATCTGTGTA
GCTGTTCAGCGCGCAATCAGCCAACACAACATTGATCCAGAGACCGTGAG
GGGCATTGGGTTCGATGCGACATGCTCGTTGTCGGTTTTTTCTAACGTTA
CGAACGAACCGATATCCGTGACGGGTCCCAACTTCAACTCGGACCGCAAT
GTGATCCTCTGGCTCGATCATCGCCCAGTGGACGAAACCGAAAGAATTAA
TGCTACGAACCACAATCTGCTCCGCTATGTAGGCGGAAAGATGTCCATCG
AGATGGAGATTCCCAAAGTCCTGTGGCTGAAAAACAATATGCCAAAGGAG
CTCTTTGATCAGTGCAAATTCTTCGACCTGGCTGACGCCCTGACTTACAT
TGCCACTGGCGCCGAGCAGAGGAGCTTCTGTAGTGTAGTCTGCAAGCAGG
GATATGTTCCTGTAGGTGTTGACGGCAGTGTAAAAGGTTGGCAGGAAGAC
TTTCTGAACGAAATTGGTCTGGAGGACCTGTCGGAGGATAACTTCAAGCG
AATGGGCGGTGTCGACGGGGTGGTGAGCCTTTTTCTTTGATGATCCTATC
AATCACACGTGTTACCCCTTTTCCACACCCTACCTGACAATGAGTTTGAC
GTCTAACTGATGCTCCAGAATGGCGATTATCTTAGCGCTGGTGAACTGGT
CGGCACATTGTGTGAGAAGGCTGCCTCTGAGCTGGGTCTGCCCCCGGGGA
TTGCAATCGGCAGCGGCGTCATCGATGCCTATGCAGGCTGGATTGGCACA
GTCGGCGCTAAGGTCGATCTCGAGTCGGAACAGCTGAGCTCTGACATCGC
CAAGAACGATAAGGCACAGGCATTCTCTCGCTTGGCCGCTGTCGCTGGAA
CATCAACCTGCCATCTTGCGATGTCCCCAGATCCTATATTTGTCCCTGGT
GTCTGGGGGCCTTACCGCGATACTATCCAGCCGGGATATTGGATGGCCGA
GGGCGGCCAATCCGCAACCGGGGAGCTGCTCAAGCATGTTATCGAGACTC
ACCCCGCGTTCAATCAGGCACTCTCGATCGCTGAGTCGTACAACGCCAAT
ATATATGAATATCTAAACGAGCATCTGAAGGAACTGGCTCATGACCAGAA
GGCTCCTAGTATCTCTTATCTGGGCCGACATGTTTTCTTCTACGGTGATC
TTTGGGGCAACCGTTCCCCCATTGCAGATCCTGGAATGACAGGTTCTATG
ATTGGGATCACGAGTGACAAGTCTGTGGATGGGCTCGCTGTTCATTACTA
TGCCACCCTCGAATTTATCGCGCTACAAACCAGGCAAATTGTGGAGACAA
TGAACAAAGCAGGTCATCACATCACCTCCATTTTCATGTCGGGCTCTCAG
TGCCAAAATGACATTCTGGTAAAGCTAATAGCATCTGCTTGTGACATGCC
CGTGCTTATCCCTCGTTATATTCATGCTGCTGTCTGCCATGGTGCAGCCA
TGCTGGGTGCCAAAGCCGCTAGTGCTGACGCAGAAGGCAAGACAGAAGAT
CTGTGGTCTATTATGGACCGCATGAGCAAGCCGGGAAAAAAGGTCGTCCC
AACTACGGATGAGACGGAGAAGGCCTTGCTTAACGCCAAATACAAGGTCT
TCTTAGAGCAATGTTACAAGCAGCAGGAGTACCGAGCCCTCGTAGATCAA
GCCGTGGCCTCGTGGACGTCTTAA back to topCoding sequence (CDS) from alignment at ch1:1911403..1913776+ >KJC3_000775-T1 ID=KJC3_000775-T1|Name=KJC3_000775-T1|organism=Aspergillus niger KJC3|type=CDS|length=5517bp|location=Sequence derived from alignment at ch1:1911403..1913776+ (Aspergillus niger KJC3)
ATGGCTTCTATACCCCAGATGCCTTATCGACGACCCTCTCGGCAGGGTTC
TAGGCAGGCGTCGATAGATACGCGGGATGAGATACAGGTCCGCGTAGACC
ACTACATTGGAATTGATGTTGGGACTGGCAGTGCCCGCGCTTGTATAATC
GATAGCAAAGGCGATATTGTCGGCCTAGCCTCTGAGAACATTGGTCTTTG
GCAACCTCAACAAGGATATTATGAACAATCTACGAACGATATCTGGCGAT
GCATCTGTGTAGCTGTTCAGCGCGCAATCAGCCAACACAACATTGATCCA
GAGACCGTGAGGGGCATTGGGTTCGATGCGACATGCTCGTTGTCGGTTTT
TTCTAACGTTACGAACGAACCGATATCCGTGACGGGTCCCAACTTCAACT
CGGACCGCAATGTGATCCTCTGGCTCGATCATCGCCCAGTGGACGAAACC
GAAAGAATTAATGCTACGAACCACAATCTGCTCCGCTATGTAGGCGGAAA
GATGTCCATCGAGATGGAGATTCCCAAAGTCCTGTGGCTGAAAAACAATA
TGCCAAAGGAGCTCTTTGATCAGTGCAAATTCTTCGACCTGGCTGACGCC
CTGACTTACATTGCCACTGGCGCCGAGCAGAGGAGCTTCTGTAGTGTAGT
CTGCAAGCAGGGATATGTTCCTGTAGGTGTTGACGGCAGTGTAAAAGGTT
GGCAGGAAGACTTTCTGAACGAAATTGGTCTGGAGGACCTGTCGGAGGAT
AACTTCAAGCGAATGGGCGGTGTCGACGGGGTGAATGGCGATTATCTTAG
CGCTGGTGAACTGGTCGGCACATTGTGTGAGAAGGCTGCCTCTGAGCTGG
GTCTGCCCCCGGGGATTGCAATCGGCAGCGGCGTCATCGATGCCTATGCA
GGCTGGATTGGCACAGTCGGCGCTAAGGTCGATCTCGAGTCGGAACAGCT
GAGCTCTGACATCGCCAAGAACGATAAGGCACAGGCATTCTCTCGCTTGG
CCGCTGTCGCTGGAACATCAACCTGCCATCTTGCGATGTCCCCAGATCCT
ATATTTGTCCCTGGTGTCTGGGGGCCTTACCGCGATACTATCCAGCCGGG
ATATTGGATGGCCGAGGGCGGCCAATCCGCAACCGGGGAGCTGCTCAAGC
ATGTTATCGAGACTCACCCCGCGTTCAATCAGGCACTCTCGATCGCTGAG
TCGTACAACGCCAATATATATGAATATCTAAACGAGCATCTGAAGGAACT
GGCTCATGACCAGAAGGCTCCTAGTATCTCTTATCTGGGCCGACATGTTT
TCTTCTACGGTGATCTTTGGGGCAACCGTTCCCCCATTGCAGATCCTGGA
ATGACAGGTTCTATGATTGGGATCACGAGTGACAAGTCTGTGGATGGGCT
CGCTGTTCATTACTATGCCACCCTCGAATTTATCGCGCTACAAACCAGGC
AAATTGTGGAGACAATGAACAAAGCAGGTCATCACATCACCTCCATTTTC
ATGTCGGGCTCTCAGTGCCAAAATGACATTCTGGTAAAGCTAATAGCATC
TGCTTGTGACATGCCCGTGCTTATCCCTCGTTATATTCATGCTGCTGTCT
GCCATGGTGCAGCCATGCTGGGTGCCAAAGCCGCTAGTGCTGACGCAGAA
GGCAAGACAGAAGATCTGTGGTCTATTATGGACCGCATGAGCAAGCCGGG
AAAAAAGGTCGTCCCAACTACGGATGAGACGGAGAAGGCCTTGCTTAACG
CCAAATACAAGGTCTTCTTAGAGCAATGTTACAAGCAGCAGGAGTACCGA
GCCCTCGTAGATCAAGCCGTGGCCTCGTGGACGTCTTAAATGGCTTCTAT
ACCCCAGATGCCTTATCGACGACCCTCTCGGCAGGGTTCTAGGCAGGCGT
CGATAGATACGCGGGATGAGATACAGGTCCGCGTAGACCACTACATTGGA
ATTGATGTTGGGACTGGCAGTGCCCGCGCTTGTATAATCGATAGCAAAGG
CGATATTGTCGGCCTAGCCTCTGAGAACATTGGTCTTTGGCAACCTCAAC
AAGGATATTATGAACAATCTACGAACGATATCTGGCGATGCATCTGTGTA
GCTGTTCAGCGCGCAATCAGCCAACACAACATTGATCCAGAGACCGTGAG
GGGCATTGGGTTCGATGCGACATGCTCGTTGTCGGTTTTTTCTAACGTTA
CGAACGAACCGATATCCGTGACGGGTCCCAACTTCAACTCGGACCGCAAT
GTGATCCTCTGGCTCGATCATCGCCCAGTGGACGAAACCGAAAGAATTAA
TGCTACGAACCACAATCTGCTCCGCTATGTAGGCGGAAAGATGTCCATCG
AGATGGAGATTCCCAAAGTCCTGTGGCTGAAAAACAATATGCCAAAGGAG
CTCTTTGATCAGTGCAAATTCTTCGACCTGGCTGACGCCCTGACTTACAT
TGCCACTGGCGCCGAGCAGAGGAGCTTCTGTAGTGTAGTCTGCAAGCAGG
GATATGTTCCTGTAGGTGTTGACGGCAGTGTAAAAGGTTGGCAGGAAGAC
TTTCTGAACGAAATTGGTCTGGAGGACCTGTCGGAGGATAACTTCAAGCG
AATGGGCGGTGTCGACGGGGTGAATGGCGATTATCTTAGCGCTGGTGAAC
TGGTCGGCACATTGTGTGAGAAGGCTGCCTCTGAGCTGGGTCTGCCCCCG
GGGATTGCAATCGGCAGCGGCGTCATCGATGCCTATGCAGGCTGGATTGG
CACAGTCGGCGCTAAGGTCGATCTCGAGTCGGAACAGCTGAGCTCTGACA
TCGCCAAGAACGATAAGGCACAGGCATTCTCTCGCTTGGCCGCTGTCGCT
GGAACATCAACCTGCCATCTTGCGATGTCCCCAGATCCTATATTTGTCCC
TGGTGTCTGGGGGCCTTACCGCGATACTATCCAGCCGGGATATTGGATGG
CCGAGGGCGGCCAATCCGCAACCGGGGAGCTGCTCAAGCATGTTATCGAG
ACTCACCCCGCGTTCAATCAGGCACTCTCGATCGCTGAGTCGTACAACGC
CAATATATATGAATATCTAAACGAGCATCTGAAGGAACTGGCTCATGACC
AGAAGGCTCCTAGTATCTCTTATCTGGGCCGACATGTTTTCTTCTACGGT
GATCTTTGGGGCAACCGTTCCCCCATTGCAGATCCTGGAATGACAGGTTC
TATGATTGGGATCACGAGTGACAAGTCTGTGGATGGGCTCGCTGTTCATT
ACTATGCCACCCTCGAATTTATCGCGCTACAAACCAGGCAAATTGTGGAG
ACAATGAACAAAGCAGGTCATCACATCACCTCCATTTTCATGTCGGGCTC
TCAGTGCCAAAATGACATTCTGGTAAAGCTAATAGCATCTGCTTGTGACA
TGCCCGTGCTTATCCCTCGTTATATTCATGCTGCTGTCTGCCATGGTGCA
GCCATGCTGGGTGCCAAAGCCGCTAGTGCTGACGCAGAAGGCAAGACAGA
AGATCTGTGGTCTATTATGGACCGCATGAGCAAGCCGGGAAAAAAGGTCG
TCCCAACTACGGATGAGACGGAGAAGGCCTTGCTTAACGCCAAATACAAG
GTCTTCTTAGAGCAATGTTACAAGCAGCAGGAGTACCGAGCCCTCGTAGA
TCAAGCCGTGGCCTCGTGGACGTCTTAAATGGCTTCTATACCCCAGATGC
CTTATCGACGACCCTCTCGGCAGGGTTCTAGGCAGGCGTCGATAGATACG
CGGGATGAGATACAGGTCCGCGTAGACCACTACATTGGAATTGATGTTGG
GACTGGCAGTGCCCGCGCTTGTATAATCGATAGCAAAGGCGATATTGTCG
GCCTAGCCTCTGAGAACATTGGTCTTTGGCAACCTCAACAAGGATATTAT
GAACAATCTACGAACGATATCTGGCGATGCATCTGTGTAGCTGTTCAGCG
CGCAATCAGCCAACACAACATTGATCCAGAGACCGTGAGGGGCATTGGGT
TCGATGCGACATGCTCGTTGTCGGTTTTTTCTAACGTTACGAACGAACCG
ATATCCGTGACGGGTCCCAACTTCAACTCGGACCGCAATGTGATCCTCTG
GCTCGATCATCGCCCAGTGGACGAAACCGAAAGAATTAATGCTACGAACC
ACAATCTGCTCCGCTATGTAGGCGGAAAGATGTCCATCGAGATGGAGATT
CCCAAAGTCCTGTGGCTGAAAAACAATATGCCAAAGGAGCTCTTTGATCA
GTGCAAATTCTTCGACCTGGCTGACGCCCTGACTTACATTGCCACTGGCG
CCGAGCAGAGGAGCTTCTGTAGTGTAGTCTGCAAGCAGGGATATGTTCCT
GTAGGTGTTGACGGCAGTGTAAAAGGTTGGCAGGAAGACTTTCTGAACGA
AATTGGTCTGGAGGACCTGTCGGAGGATAACTTCAAGCGAATGGGCGGTG
TCGACGGGGTGAATGGCGATTATCTTAGCGCTGGTGAACTGGTCGGCACA
TTGTGTGAGAAGGCTGCCTCTGAGCTGGGTCTGCCCCCGGGGATTGCAAT
CGGCAGCGGCGTCATCGATGCCTATGCAGGCTGGATTGGCACAGTCGGCG
CTAAGGTCGATCTCGAGTCGGAACAGCTGAGCTCTGACATCGCCAAGAAC
GATAAGGCACAGGCATTCTCTCGCTTGGCCGCTGTCGCTGGAACATCAAC
CTGCCATCTTGCGATGTCCCCAGATCCTATATTTGTCCCTGGTGTCTGGG
GGCCTTACCGCGATACTATCCAGCCGGGATATTGGATGGCCGAGGGCGGC
CAATCCGCAACCGGGGAGCTGCTCAAGCATGTTATCGAGACTCACCCCGC
GTTCAATCAGGCACTCTCGATCGCTGAGTCGTACAACGCCAATATATATG
AATATCTAAACGAGCATCTGAAGGAACTGGCTCATGACCAGAAGGCTCCT
AGTATCTCTTATCTGGGCCGACATGTTTTCTTCTACGGTGATCTTTGGGG
CAACCGTTCCCCCATTGCAGATCCTGGAATGACAGGTTCTATGATTGGGA
TCACGAGTGACAAGTCTGTGGATGGGCTCGCTGTTCATTACTATGCCACC
CTCGAATTTATCGCGCTACAAACCAGGCAAATTGTGGAGACAATGAACAA
AGCAGGTCATCACATCACCTCCATTTTCATGTCGGGCTCTCAGTGCCAAA
ATGACATTCTGGTAAAGCTAATAGCATCTGCTTGTGACATGCCCGTGCTT
ATCCCTCGTTATATTCATGCTGCTGTCTGCCATGGTGCAGCCATGCTGGG
TGCCAAAGCCGCTAGTGCTGACGCAGAAGGCAAGACAGAAGATCTGTGGT
CTATTATGGACCGCATGAGCAAGCCGGGAAAAAAGGTCGTCCCAACTACG
GATGAGACGGAGAAGGCCTTGCTTAACGCCAAATACAAGGTCTTCTTAGA
GCAATGTTACAAGCAGCAGGAGTACCGAGCCCTCGTAGATCAAGCCGTGG
CCTCGTGGACGTCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000775-T1.utr5p1 | KJC3_000775-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR018484 |
| DBxref | InterPro:IPR006003 |
| DBxref | InterPro:IPR018485 |
| DBxref | PFAM:PF00370 |
| DBxref | PFAM:PF02782 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1911403..1913776 + |
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