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KJC3_000777-T1, KJC3_000777-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000777-T1
Unique NameKJC3_000777-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1918705..1920760+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000777-T1 ID=KJC3_000777-T1|Name=KJC3_000777-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2056bp|location=Sequence derived from alignment at ch1:1918705..1920760+ (Aspergillus niger KJC3)
GTTAGTTACTTCGGGTTACCTCACCTACCTACCTAAACTAACAGCTAACT
GCGGTACCTATCCCGCAAGAGCTCTCTCGACCCAACTGCCATCACCACTC
CTCTCATCACCTTCCCTGTTCCTCACTCTTCGACTGTCTTCTTTCTCTTT
CTCTGATTCGATAAAAAGGACCCTATCTGCTCCTGGGATCGCTCCATACT
AAATACATCGCCGACGTCCAGTCTTTCGTGTTTCACGCCTCGCTGTGGCC
GTATCAAGGAGCGTCATTCCTGGCTGTCCATCATGGCGCTCGACAACTAT
TATCGCAATAAGATTGAGAGCATGAAGCTCGAAATCATCCAGGGTCAGGC
TGTCTTACGGAGACTGGAAGCACAGCGCAATGACTATAATTCGAGGGTGC
GGTTACTTCGGGAAGAACTCGGCTTGCTTCAACAGCCTGGTTCCTATGTC
GGGGAGGTAGTCAAAGTGATGAGCACCAAGAAAGTCCTCGTCAAAGTGCA
TCCCGAGGGCAAATATGGTAAACCCCCTCTGCAGATTTGCTAGCTCGAGT
CTTTGCTTGCTCAACTCCGTGCGTCCCTTACTAACTTCTCTTGCGACGCT
ACAGTGGTGGACATTGCGGATGGCGTTGATATCAGCAAGCTCACTGTAGG
AAAGCGAGTCGCTTTACTCTCGGATTCCTATAAGTTGGAGAAGATGCTAC
CCTCGTCGGTTGACCCGCTGGTGTCGCTAATGATGGTCGAGAAAGTGCCT
GACAGCACGTATGACATGATCGGTGGACTTGACCAGCAGATCAAGGAGAT
CAAGGAAGTCATCGAGCTTGGTTTAAAACATCCGGAGTTGTTCGAGTCGC
TTGGTATCGCACAACCGAAGGGAGTACTCCTCTACGGACCGCCAGGAACC
GGCAAAACCCTGCTTGCCCGAGCGGTAGCCCATCACACCGATTGTCGGTT
CATCAGAGTGAGCGGATCGGAATTGGTGCAAAAATACATCGGTGAAGGTA
GCCGCATGGTTCGCGAGCTATTCGTAATGGCTCGAGAGCATGCTCCGAGT
ATCATATTCATGGATGAGATTGATAGCATTGGATCCAGCCGCATAGACTC
GGCGGGTTCGGGTGATTCAGAGGTACAACGGACGATGCTTGAGCTCCTCA
ATCAACTGGACGGATTTGAACCTACCAAGAACATCAAGATCATCATGGCC
ACCAACCGGCTTGACATCCTGGACCCGGCCTTGTTACGTCCTGGCCGGAT
TGACCGGAAGATTGAGTTCCCTCCGCCGTCGTGAGTATCCCTTGTGACTT
GGCTCTTATCGGGTGAAGCTTATGTTACGTTTTACTGATCAATTTCCTTC
TTTCAGGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCGGTCAA
TGAACTTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGATGAAC
GGATGTTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGCATGTA
CGCTCTGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGACCTAG
CCACCGCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGGTCTCT
AAGCTTTTCAAGTAAAGATGAGTTTGCGTGTGAATAGTACCAGGTTACTA
CAGCAAGAACTATGGCGTTTAGTTTCGATGTCCTCTGATGGCCGCCTCGG
CGACGTCGCCACATATGTTTGCCGATCATGACACCCATACTTAATCTTTC
TCAGTATCCCTGTTGAAGGACAGGTCTGTTTGTGTGTGACGTTGAGGTCT
AAGATGAGCCTTCCTGTTCGCATACAGTATCGTAATCGAGGGTTTGTTGG
CAGTTGGGTGGACGCAAAGGATAACTCCCAGATTCGGCTATACTAGGCAT
AGGATTTTGCGTATTGTGTATCTACACCCTGAGACTGAATAGTTGGTTGG
ATTGGGCCCTCGGCTTGCGAGGACAATCATCAAGACTCCGGAAGGGTAAG
GCGTAGCAAACAATTGAAGTGTATCTTCCATTGGATTCTTAAGGGATGAT
CATCTC
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Coding sequence (CDS) from alignment at ch1:1918705..1920760+

>KJC3_000777-T1 ID=KJC3_000777-T1|Name=KJC3_000777-T1|organism=Aspergillus niger KJC3|type=CDS|length=3510bp|location=Sequence derived from alignment at ch1:1918705..1920760+ (Aspergillus niger KJC3)
ATGGCGCTCGACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGA
AATCATCCAGGGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATG
ACTATAATTCGAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAA
CAGCCTGGTTCCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAA
AGTCCTCGTCAAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGG
ATGGCGTTGATATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTC
TCGGATTCCTATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCT
GGTGTCGCTAATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGA
TCGGTGGACTTGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTT
GGTTTAAAACATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAA
GGGAGTACTCCTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCC
GAGCGGTAGCCCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCG
GAATTGGTGCAAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCT
ATTCGTAATGGCTCGAGAGCATGCTCCGAGTATCATATTCATGGATGAGA
TTGATAGCATTGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCA
GAGGTACAACGGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGA
ACCTACCAAGAACATCAAGATCATCATGGCCACCAACCGGCTTGACATCC
TGGACCCGGCCTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTC
CCTCCGCCGTCGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCG
GTCAATGAACTTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGA
TGAACGGATGTTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGC
ATGTACGCTCTGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGA
CCTAGCCACCGCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGG
TCTCTAAGCTTTTCAAGTAAATGGCGCTCGACAACTATTATCGCAATAAG
ATTGAGAGCATGAAGCTCGAAATCATCCAGGGTCAGGCTGTCTTACGGAG
ACTGGAAGCACAGCGCAATGACTATAATTCGAGGGTGCGGTTACTTCGGG
AAGAACTCGGCTTGCTTCAACAGCCTGGTTCCTATGTCGGGGAGGTAGTC
AAAGTGATGAGCACCAAGAAAGTCCTCGTCAAAGTGCATCCCGAGGGCAA
ATATGTGGTGGACATTGCGGATGGCGTTGATATCAGCAAGCTCACTGTAG
GAAAGCGAGTCGCTTTACTCTCGGATTCCTATAAGTTGGAGAAGATGCTA
CCCTCGTCGGTTGACCCGCTGGTGTCGCTAATGATGGTCGAGAAAGTGCC
TGACAGCACGTATGACATGATCGGTGGACTTGACCAGCAGATCAAGGAGA
TCAAGGAAGTCATCGAGCTTGGTTTAAAACATCCGGAGTTGTTCGAGTCG
CTTGGTATCGCACAACCGAAGGGAGTACTCCTCTACGGACCGCCAGGAAC
CGGCAAAACCCTGCTTGCCCGAGCGGTAGCCCATCACACCGATTGTCGGT
TCATCAGAGTGAGCGGATCGGAATTGGTGCAAAAATACATCGGTGAAGGT
AGCCGCATGGTTCGCGAGCTATTCGTAATGGCTCGAGAGCATGCTCCGAG
TATCATATTCATGGATGAGATTGATAGCATTGGATCCAGCCGCATAGACT
CGGCGGGTTCGGGTGATTCAGAGGTACAACGGACGATGCTTGAGCTCCTC
AATCAACTGGACGGATTTGAACCTACCAAGAACATCAAGATCATCATGGC
CACCAACCGGCTTGACATCCTGGACCCGGCCTTGTTACGTCCTGGCCGGA
TTGACCGGAAGATTGAGTTCCCTCCGCCGTCGGTGGAGGCTCGTGCCGAT
ATTCTGCGAATCCACTCGCGGTCAATGAACTTGACGCGAGGCATCAACCT
AACGAAGATTGCGGAGAAGATGAACGGATGTTCTGGAGCTGAGCTGAAGG
GTGTGTGCACGGAAGCAGGCATGTACGCTCTGCGAGAGCGGCGAGTACAC
GTTACGCAAGAGGATTTCGACCTAGCCACCGCCAAGATCCTCAACAAGCA
CGACGACAAAGAAGTCGCGGTCTCTAAGCTTTTCAAGTAAATGGCGCTCG
ACAACTATTATCGCAATAAGATTGAGAGCATGAAGCTCGAAATCATCCAG
GGTCAGGCTGTCTTACGGAGACTGGAAGCACAGCGCAATGACTATAATTC
GAGGGTGCGGTTACTTCGGGAAGAACTCGGCTTGCTTCAACAGCCTGGTT
CCTATGTCGGGGAGGTAGTCAAAGTGATGAGCACCAAGAAAGTCCTCGTC
AAAGTGCATCCCGAGGGCAAATATGTGGTGGACATTGCGGATGGCGTTGA
TATCAGCAAGCTCACTGTAGGAAAGCGAGTCGCTTTACTCTCGGATTCCT
ATAAGTTGGAGAAGATGCTACCCTCGTCGGTTGACCCGCTGGTGTCGCTA
ATGATGGTCGAGAAAGTGCCTGACAGCACGTATGACATGATCGGTGGACT
TGACCAGCAGATCAAGGAGATCAAGGAAGTCATCGAGCTTGGTTTAAAAC
ATCCGGAGTTGTTCGAGTCGCTTGGTATCGCACAACCGAAGGGAGTACTC
CTCTACGGACCGCCAGGAACCGGCAAAACCCTGCTTGCCCGAGCGGTAGC
CCATCACACCGATTGTCGGTTCATCAGAGTGAGCGGATCGGAATTGGTGC
AAAAATACATCGGTGAAGGTAGCCGCATGGTTCGCGAGCTATTCGTAATG
GCTCGAGAGCATGCTCCGAGTATCATATTCATGGATGAGATTGATAGCAT
TGGATCCAGCCGCATAGACTCGGCGGGTTCGGGTGATTCAGAGGTACAAC
GGACGATGCTTGAGCTCCTCAATCAACTGGACGGATTTGAACCTACCAAG
AACATCAAGATCATCATGGCCACCAACCGGCTTGACATCCTGGACCCGGC
CTTGTTACGTCCTGGCCGGATTGACCGGAAGATTGAGTTCCCTCCGCCGT
CGGTGGAGGCTCGTGCCGATATTCTGCGAATCCACTCGCGGTCAATGAAC
TTGACGCGAGGCATCAACCTAACGAAGATTGCGGAGAAGATGAACGGATG
TTCTGGAGCTGAGCTGAAGGGTGTGTGCACGGAAGCAGGCATGTACGCTC
TGCGAGAGCGGCGAGTACACGTTACGCAAGAGGATTTCGACCTAGCCACC
GCCAAGATCCTCAACAAGCACGACGACAAAGAAGTCGCGGTCTCTAAGCT
TTTCAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LET1KJC3_000777Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000777-T1KJC3_000777-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000777-T1.utr5p1KJC3_000777-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000777-T1.exon1KJC3_000777-T1.exon1Aspergillus niger KJC3exon
KJC3_000777-T1.exon2KJC3_000777-T1.exon2Aspergillus niger KJC3exon
KJC3_000777-T1.exon3KJC3_000777-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000777-T1.cdsKJC3_000777-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000777-T1.utr3p1KJC3_000777-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR041569
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR032501
DBxrefInterPro:IPR003593
DBxrefPFAM:PF16450
DBxrefPFAM:PF17862
DBxrefPFAM:PF07728
DBxrefPFAM:PF07724
DBxrefPFAM:PF00004
Product26S protease regulatory subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1918705..1920760 +
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