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KJC3_000779-T1, KJC3_000779-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000779-T1
Unique NameKJC3_000779-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1927163..1929490+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000779-T1 ID=KJC3_000779-T1|Name=KJC3_000779-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2328bp|location=Sequence derived from alignment at ch1:1927163..1929490+ (Aspergillus niger KJC3)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCTGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAGTTCTTGGTTGACAAAGTTGAGCCCCATGGCAATGGCATCTGCGTTG
TGGATACGGATCTGGAAGTGGATATTGTCGCCTTGACAGAGGACCAAGCC
AGAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGAA
TAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTAA
GTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATGG
GATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAGA
TCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCGC
GGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACGG
ATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGTA
TATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTTT
CGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACAA
GCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATGT
GCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTAC
ATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAAC
GTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTCA
TGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCACT
TTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGAC
CTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCAT
TCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGACC
CCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGAA
TTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCAT
CCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGTC
TGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGACG
CTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCAT
CTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCAC
TCAGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTGC
GGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTAG
ACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATTC
TAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGCA
CCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAACG
CCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGCA
AGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGGA
AATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAGG
GGAAGGCACGGAATCTTTTCAACGGTAG
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Coding sequence (CDS) from alignment at ch1:1927163..1929490+

>KJC3_000779-T1 ID=KJC3_000779-T1|Name=KJC3_000779-T1|organism=Aspergillus niger KJC3|type=CDS|length=2328bp|location=Sequence derived from alignment at ch1:1927163..1929490+ (Aspergillus niger KJC3)
ATGACGGGGAACCAAGGTTCCTTGCGCTGGTCATCGCAGTTGACCGTTGC
TCCAGCCCAGCAAATCCCCAAGCTTTCTGGCGATAAGATCATACTGCCAC
CATCCGCGCTCGAGCAGCTTCTCGCGGCTGCCCCGCTTCAAGAGGTAACT
TCGTCAGGCCCAGCACGCCCATACACCAACACTTTCGATCCCTTTAATCC
GCACACCTTCGCCGCCGAGTCCCAAGCGCGCGAACGGGCGGTGGATCGCC
AGCAGCAATTGCCCCATCCGCTTACGTTCCGCATCGTGAACCCTCAGAAC
GACCGGGTGGTATATGCTGGTGTCCGCGAGTTTTCTGCGCCAGAGAACGA
GATCGGCCTTAGCACATTTTTACGTGGGGCCCTTGGCATTGATGGTACGC
GACAACCGTCACCACACGGCGGTGATGGTAATGATGGTGATGTGACAGAC
AATGCGCCAGCCGCGCCGACCACGGTCACGGTCCATGCGCAACAGTTACC
GAAAGGTACTTATGTCCGCCTGCGCCCTCTAGAAGCCGGGTACGACCCGG
GAAATTGGAAAGCTTTGCTCGAACAACAGCTGCGGGACAATTACACCACC
TTAACCTCTGGAGAGGTCCTCACCGTTGCAGGGGGCCGCAATCAGTCGTT
TCAGTTCTTGGTTGACAAAGTTGAGCCCCATGGCAATGGCATCTGCGTTG
TGGATACGGATCTGGAAGTGGATATTGTCGCCTTGACAGAGGACCAAGCC
AGAGAGACGTTAGAGAAACGGTTGGAGAAATCTTCCCGTGTCTCTGCGAA
TAGGGCAGGCACATCCGTGGGAGGTGAGCTGCGACTCGGTCAGGTAGTAA
GTGGTCAGGTTGCGCTTGGGGACTATGTCGACTACGAGGTCCTTAAATGG
GATCCTTCGAATGCACTGGAACTGTCTGTCAAGGGTGCCGACGATGTAGA
TCTGTGTCTTTTTGCCAGTCCCCTTTCTGCTCGCCAGAGGAACCGACCGC
GGGAGGATGAGCATGTTTTCGGTGACCTCTCAAATCGACCGACTAAACGG
ATTAGGATCCAACCGACGAATGTGGATATGGAAGGCGCTGAGTTGCTGTA
TATATCGGTCCATGCCCCCACTTCCACCGACAGTTCAGGAAATGGACTTT
CGGCGCTGCCGTATAGCCTACAGGTCCATGTGGGCTCGTCACCCGCACAA
GCTGAGAACGCTGCAGACAGCGAGCCAGAAAGTCGTGAACCGGGTGATGT
GCAGTGTAAGAATTGTCGTCAATGGGTACCTGAGCGGACATTGATGCTAC
ATGAGAACTTTTGCCTTCGAAACAACATTCTCTGCCCCCAGTGCCAGAAC
GTGTTCCAGAAACGGTCTCCGGAATGGCAGACACATTGGCATTGTCCTCA
TGACTCGGCTTATGGCACCGGTGACGCCGAAAAGAATCGACATAATCACT
TTTTCCACAGCAAGCGCTCCTGTAGTGGCTGTGGATTCGAGGCGGAGGAC
CTCTCACGTCTCGCTCAACACCGCACAACTGTCTGTCCGGCAAAACCCAT
TCTGTGCCAATTTTGTCATCTTGTGGTCCCTCAAAAGAGTGAATCAGACC
CCGAAATGGACGATCCGGACGTTTTAGTCTCCGGCCTCACACCACATGAA
TTGGTGGACGGTGGCCGGACAACTGAATGCCACCTCTGTGACAAAATCAT
CCGTCTCCGCGACATGAAAATGCACCTTCGCCATCATGATCTAGAACGTC
TGTCTCGACCCACTCCTCGCATATGCTTAAATCAAAATTGCGGACGGACG
CTTGATGGACGCGGTACTCAAACTGCAGTCAACCTCGGTCTATGCAGCAT
CTGCTTTGGACCACTGTACGTAGACACCTACGATCCCGAAGGCAAAGCAC
TCAGGCGGCGCATCGAGCGCCGCTACCTCTCTCAGATGATGAGCGGCTGC
GGCAAACCATGGTGTCAAAACGAATATTGCAAAACGGGCAAACAAGCTAG
ACCATCTTCCACATCTGGTGCGTCTGCCCCGTTGGGCGCGGCAGCTATTC
TAGCCGCAGTGCGGCCTTTGCTTGACGCCGTCAATCTTCGAGGAAATGCA
CCGAACACCGCTCCGTTTTACCTTTGCACGGATCAGACAGGCCAGCAACG
CCGCATCGCTGCAGAAATGCTTTCAACTGAAGGCGCAGTAGCTGACGGCA
AGACCTATGCATTGCCATGGTGCGTTTCCGCCGTTGAAACCACGGCGGGA
AATTTAGACAAGGCGCGAGAGTGGTTGGAAAATTGGGCGCCTGCGCAAGG
GGAAGGCACGGAATCTTTTCAACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000779KJC3_000779Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000779-T1.exon1KJC3_000779-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000779-T1.cdsKJC3_000779-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000779-T1KJC3_000779-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR032353
DBxrefInterPro:IPR042556
DBxrefInterPro:IPR042299
DBxrefInterPro:IPR004854
DBxrefPFAM:PF03152
DBxrefPFAM:PF16558
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1927163..1929490 +
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