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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1931202..1933211- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000781-T1 ID=KJC3_000781-T1|Name=KJC3_000781-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2010bp|location=Sequence derived from alignment at ch1:1931202..1933211- (Aspergillus niger KJC3)
TCACGTGCGAGGGCGGATGGCTTCATCTTCGCCGCTGCGGAAGGGAAAGC
AGGAAAGGCAAAAGCAGGTCTCATCTGGCCATTGCCGCCGCAGCAATGTC
CTCTCCACTTTCTGCTGATGACGAAGATGTTCGTGATGCGTCCCCTCTTG
TTTAACCCTGAGGAATTCCCCCGAGCACTCTGTGCTGACCACAAACGGCG
TTCTCCCTCTTCTAGATCTTCGCGCGCCTGCAACAGCGTGCCGATCCGAA
AGTGCTGAATGAGCAGCAACAGGCAGTCGATGAGCGCGTTCGTGCTATTT
ATCAAAAGGCGCAGACTCGTCTTGGTGAATTGGTAAGCTGGCTCCCCTCA
TAATTGGCTGTGGGCCATGGACATGATCATTACTATACATCGTGCGTCAT
GATAGCTGACCTATGAGCTTATATAACATCAGCTCGACCAGAACTCGACG
TTGCCATGCACTATCTCTTCGGTAGAGGTTCACGGCGCTCGCAACACCCG
CCGAGCCTTTCTGGAGCGTATCTTCAACCCCCTCCTAAGCAGTAACCAAG
ACAGACCCTATACGCTCTCCGAGGCCTTGCGGGAAGTTTCGGCACGTGCG
GATAAGCTCAACAGATTCGGTTCGTCCCCTCCCCGATGATAGCTAGCTAA
AGACTCGACTCTAATTCCATGTTCAGACATCTTCCAACAACCCGTTTCGG
TATACCTGGATCAGTCCGAAGTAGACGGATCGGGTATCCCGAGCATCAAA
GTTCATCTCTCGGGCAAAGAAAGGTCCCGCGTGCTGTTGAAGACAGGTAC
TGATCTTGGAAACGCCGAAGGTTCGGCTTATGGCAACCTCCTGTGGCGTA
ATGTATTTGGAGGTGCAGAGAATCTCAACCTAAATGCGTCTCTGGGCACC
CGAACACGGTCTGCCTATCAAGCTACTTTTGACACCCCAGTCCTCAGTAA
CCCAGATCTCCGTCTGGAGCTTGGTGGAATTGCCAGTGCCACGCAGAAAT
CCTGGGCAAGCCACGAGGAAGTGCTCAGAGGAGGATGGTCCAAATTCCGT
TGGGCAAATTCTTCCGGTCAGCAACATGAAATCGGCTACAACGGTTTCTG
GAGACAAATGACTGGACTTACCGAGAACGCATCCCCTACTGTTCGAGCTG
ATGCAGGCGACAGTGTCAAGAGCAGCGTGTTCCACAGCTGGAGCAAGGAC
CGAAGAGATAGCCCGCTTCTTCCCTCTCGTGGTTACTACGCAAAGATGTT
CAACGAGCTGGCTGGTTGGGGTCCTCTCAAGGGTGATGTCTCCTTCTGGA
AGTCGGAGATTGAAACGCAAGCCGCAGTTCCTATTCCGATCCCTGGCATC
AAAGGAGACAGTGGTATCAGTCTGACTACTGGCTTCCGCGCCGGTCTTCT
TTACCCTCTTGGACTTGATAGTGATTCCAGACCCCAGCTCTCTCGCACGA
ACGACCGATTCCTACTTGGAGGCCCTACAGACGTCCGTGGATTCCGTCTC
TGCGGTCTTGGTCCCCATGACGGAGCAGATGCTGTCGGTGGTGATTTGTA
TGCTGCAGGAAGCGCCAATCTTCTGTTCCCACTCCCCAGGGTAGGCGCGG
AGAAGCCTCTCCGCCTGCAAGCTTTTGTCAACGGCGGACGGTTGTTGTCC
CTCCGCACGGCTGACAAGAATGCACCTACTTCGAGTGCGGAGGTCCAAAA
TGCCATGGCTTCCACGGTTTCCGAGCTAACCAACGGTCTGCCTAGCATCG
CGGCGGGTGTCGGACTTGTCTACGCCCATCCGGTGGCCAGGTTCGAGCTC
AACTTCTCCCTACCTCTGGTCCTTCGCAAGGGTGAGGAAGGCCGGAAGGG
GCTGCAGTTTGGAATCGGCATCAATTTCCTGTAGAAAATATTCGACACTG
TAACAAACTAGATAGAGGAGGGGGGAGGGAGACTGGGGAGAGTCGCTCAT
ATTCTTTTATTTTCTCAAAGGGAGTTCCCATTCCTGTTAGAAGCATGAAT
CAATTAAGCG back to topCoding sequence (CDS) from alignment at ch1:1931202..1933211- >KJC3_000781-T1 ID=KJC3_000781-T1|Name=KJC3_000781-T1|organism=Aspergillus niger KJC3|type=CDS|length=6180bp|location=Sequence derived from alignment at ch1:1931202..1933211- (Aspergillus niger KJC3)
ACATCTTCCAACAACCCGTTTCGGTATACCTGGATCAGTCCGAAGTAGAC
GGATCGGGTATCCCGAGCATCAAAGTTCATCTCTCGGGCAAAGAAAGGTC
CCGCGTGCTGTTGAAGACAGGTACTGATCTTGGAAACGCCGAAGGTTCGG
CTTATGGCAACCTCCTGTGGCGTAATGTATTTGGAGGTGCAGAGAATCTC
AACCTAAATGCGTCTCTGGGCACCCGAACACGGTCTGCCTATCAAGCTAC
TTTTGACACCCCAGTCCTCAGTAACCCAGATCTCCGTCTGGAGCTTGGTG
GAATTGCCAGTGCCACGCAGAAATCCTGGGCAAGCCACGAGGAAGTGCTC
AGAGGAGGATGGTCCAAATTCCGTTGGGCAAATTCTTCCGGTCAGCAACA
TGAAATCGGCTACAACGGTTTCTGGAGACAAATGACTGGACTTACCGAGA
ACGCATCCCCTACTGTTCGAGCTGATGCAGGCGACAGTGTCAAGAGCAGC
GTGTTCCACAGCTGGAGCAAGGACCGAAGAGATAGCCCGCTTCTTCCCTC
TCGTGGTTACTACGCAAAGATGTTCAACGAGCTGGCTGGTTGGGGTCCTC
TCAAGGGTGATGTCTCCTTCTGGAAGTCGGAGATTGAAACGCAAGCCGCA
GTTCCTATTCCGATCCCTGGCATCAAAGGAGACAGTGGTATCAGTCTGAC
TACTGGCTTCCGCGCCGGTCTTCTTTACCCTCTTGGACTTGATAGTGATT
CCAGACCCCAGCTCTCTCGCACGAACGACCGATTCCTACTTGGAGGCCCT
ACAGACGTCCGTGGATTCCGTCTCTGCGGTCTTGGTCCCCATGACGGAGC
AGATGCTGTCGGTGGTGATTTGTATGCTGCAGGAAGCGCCAATCTTCTGT
TCCCACTCCCCAGGGTAGGCGCGGAGAAGCCTCTCCGCCTGCAAGCTTTT
GTCAACGGCGGACGGTTGTTGTCCCTCCGCACGGCTGACAAGAATGCACC
TACTTCGAGTGCGGAGGTCCAAAATGCCATGGCTTCCACGGTTTCCGAGC
TAACCAACGGTCTGCCTAGCATCGCGGCGGGTGTCGGACTTGTCTACGCC
CATCCGGTGGCCAGGTTCGAGCTCAACTTCTCCCTACCTCTGGTCCTTCG
CAAGGGTGAGGAAGGCCGGAAGGGGCTGCAGTTTGGAATCGGCATCAATT
TCCTGTAGCTCGACCAGAACTCGACGTTGCCATGCACTATCTCTTCGGTA
GAGGTTCACGGCGCTCGCAACACCCGCCGAGCCTTTCTGGAGCGTATCTT
CAACCCCCTCCTAAGCAGTAACCAAGACAGACCCTATACGCTCTCCGAGG
CCTTGCGGGAAGTTTCGGCACGTGCGGATAAGCTCAACAGATTCGATCTT
CGCGCGCCTGCAACAGCGTGCCGATCCGAAAGTGCTGAATGAGCAGCAAC
AGGCAGTCGATGAGCGCGTTCGTGCTATTTATCAAAAGGCGCAGACTCGT
CTTGGTGAATTGATGTCCTCTCCACTTTCTGCTGATGACGAAGATACATC
TTCCAACAACCCGTTTCGGTATACCTGGATCAGTCCGAAGTAGACGGATC
GGGTATCCCGAGCATCAAAGTTCATCTCTCGGGCAAAGAAAGGTCCCGCG
TGCTGTTGAAGACAGGTACTGATCTTGGAAACGCCGAAGGTTCGGCTTAT
GGCAACCTCCTGTGGCGTAATGTATTTGGAGGTGCAGAGAATCTCAACCT
AAATGCGTCTCTGGGCACCCGAACACGGTCTGCCTATCAAGCTACTTTTG
ACACCCCAGTCCTCAGTAACCCAGATCTCCGTCTGGAGCTTGGTGGAATT
GCCAGTGCCACGCAGAAATCCTGGGCAAGCCACGAGGAAGTGCTCAGAGG
AGGATGGTCCAAATTCCGTTGGGCAAATTCTTCCGGTCAGCAACATGAAA
TCGGCTACAACGGTTTCTGGAGACAAATGACTGGACTTACCGAGAACGCA
TCCCCTACTGTTCGAGCTGATGCAGGCGACAGTGTCAAGAGCAGCGTGTT
CCACAGCTGGAGCAAGGACCGAAGAGATAGCCCGCTTCTTCCCTCTCGTG
GTTACTACGCAAAGATGTTCAACGAGCTGGCTGGTTGGGGTCCTCTCAAG
GGTGATGTCTCCTTCTGGAAGTCGGAGATTGAAACGCAAGCCGCAGTTCC
TATTCCGATCCCTGGCATCAAAGGAGACAGTGGTATCAGTCTGACTACTG
GCTTCCGCGCCGGTCTTCTTTACCCTCTTGGACTTGATAGTGATTCCAGA
CCCCAGCTCTCTCGCACGAACGACCGATTCCTACTTGGAGGCCCTACAGA
CGTCCGTGGATTCCGTCTCTGCGGTCTTGGTCCCCATGACGGAGCAGATG
CTGTCGGTGGTGATTTGTATGCTGCAGGAAGCGCCAATCTTCTGTTCCCA
CTCCCCAGGGTAGGCGCGGAGAAGCCTCTCCGCCTGCAAGCTTTTGTCAA
CGGCGGACGGTTGTTGTCCCTCCGCACGGCTGACAAGAATGCACCTACTT
CGAGTGCGGAGGTCCAAAATGCCATGGCTTCCACGGTTTCCGAGCTAACC
AACGGTCTGCCTAGCATCGCGGCGGGTGTCGGACTTGTCTACGCCCATCC
GGTGGCCAGGTTCGAGCTCAACTTCTCCCTACCTCTGGTCCTTCGCAAGG
GTGAGGAAGGCCGGAAGGGGCTGCAGTTTGGAATCGGCATCAATTTCCTG
TAGCTCGACCAGAACTCGACGTTGCCATGCACTATCTCTTCGGTAGAGGT
TCACGGCGCTCGCAACACCCGCCGAGCCTTTCTGGAGCGTATCTTCAACC
CCCTCCTAAGCAGTAACCAAGACAGACCCTATACGCTCTCCGAGGCCTTG
CGGGAAGTTTCGGCACGTGCGGATAAGCTCAACAGATTCGATCTTCGCGC
GCCTGCAACAGCGTGCCGATCCGAAAGTGCTGAATGAGCAGCAACAGGCA
GTCGATGAGCGCGTTCGTGCTATTTATCAAAAGGCGCAGACTCGTCTTGG
TGAATTGATGTCCTCTCCACTTTCTGCTGATGACGAAGATACATCTTCCA
ACAACCCGTTTCGGTATACCTGGATCAGTCCGAAGTAGACGGATCGGGTA
TCCCGAGCATCAAAGTTCATCTCTCGGGCAAAGAAAGGTCCCGCGTGCTG
TTGAAGACAGGTACTGATCTTGGAAACGCCGAAGGTTCGGCTTATGGCAA
CCTCCTGTGGCGTAATGTATTTGGAGGTGCAGAGAATCTCAACCTAAATG
CGTCTCTGGGCACCCGAACACGGTCTGCCTATCAAGCTACTTTTGACACC
CCAGTCCTCAGTAACCCAGATCTCCGTCTGGAGCTTGGTGGAATTGCCAG
TGCCACGCAGAAATCCTGGGCAAGCCACGAGGAAGTGCTCAGAGGAGGAT
GGTCCAAATTCCGTTGGGCAAATTCTTCCGGTCAGCAACATGAAATCGGC
TACAACGGTTTCTGGAGACAAATGACTGGACTTACCGAGAACGCATCCCC
TACTGTTCGAGCTGATGCAGGCGACAGTGTCAAGAGCAGCGTGTTCCACA
GCTGGAGCAAGGACCGAAGAGATAGCCCGCTTCTTCCCTCTCGTGGTTAC
TACGCAAAGATGTTCAACGAGCTGGCTGGTTGGGGTCCTCTCAAGGGTGA
TGTCTCCTTCTGGAAGTCGGAGATTGAAACGCAAGCCGCAGTTCCTATTC
CGATCCCTGGCATCAAAGGAGACAGTGGTATCAGTCTGACTACTGGCTTC
CGCGCCGGTCTTCTTTACCCTCTTGGACTTGATAGTGATTCCAGACCCCA
GCTCTCTCGCACGAACGACCGATTCCTACTTGGAGGCCCTACAGACGTCC
GTGGATTCCGTCTCTGCGGTCTTGGTCCCCATGACGGAGCAGATGCTGTC
GGTGGTGATTTGTATGCTGCAGGAAGCGCCAATCTTCTGTTCCCACTCCC
CAGGGTAGGCGCGGAGAAGCCTCTCCGCCTGCAAGCTTTTGTCAACGGCG
GACGGTTGTTGTCCCTCCGCACGGCTGACAAGAATGCACCTACTTCGAGT
GCGGAGGTCCAAAATGCCATGGCTTCCACGGTTTCCGAGCTAACCAACGG
TCTGCCTAGCATCGCGGCGGGTGTCGGACTTGTCTACGCCCATCCGGTGG
CCAGGTTCGAGCTCAACTTCTCCCTACCTCTGGTCCTTCGCAAGGGTGAG
GAAGGCCGGAAGGGGCTGCAGTTTGGAATCGGCATCAATTTCCTGTAGCT
CGACCAGAACTCGACGTTGCCATGCACTATCTCTTCGGTAGAGGTTCACG
GCGCTCGCAACACCCGCCGAGCCTTTCTGGAGCGTATCTTCAACCCCCTC
CTAAGCAGTAACCAAGACAGACCCTATACGCTCTCCGAGGCCTTGCGGGA
AGTTTCGGCACGTGCGGATAAGCTCAACAGATTCGATCTTCGCGCGCCTG
CAACAGCGTGCCGATCCGAAAGTGCTGAATGAGCAGCAACAGGCAGTCGA
TGAGCGCGTTCGTGCTATTTATCAAAAGGCGCAGACTCGTCTTGGTGAAT
TGATGTCCTCTCCACTTTCTGCTGATGACGAAGATACATCTTCCAACAAC
CCGTTTCGGTATACCTGGATCAGTCCGAAGTAGACGGATCGGGTATCCCG
AGCATCAAAGTTCATCTCTCGGGCAAAGAAAGGTCCCGCGTGCTGTTGAA
GACAGGTACTGATCTTGGAAACGCCGAAGGTTCGGCTTATGGCAACCTCC
TGTGGCGTAATGTATTTGGAGGTGCAGAGAATCTCAACCTAAATGCGTCT
CTGGGCACCCGAACACGGTCTGCCTATCAAGCTACTTTTGACACCCCAGT
CCTCAGTAACCCAGATCTCCGTCTGGAGCTTGGTGGAATTGCCAGTGCCA
CGCAGAAATCCTGGGCAAGCCACGAGGAAGTGCTCAGAGGAGGATGGTCC
AAATTCCGTTGGGCAAATTCTTCCGGTCAGCAACATGAAATCGGCTACAA
CGGTTTCTGGAGACAAATGACTGGACTTACCGAGAACGCATCCCCTACTG
TTCGAGCTGATGCAGGCGACAGTGTCAAGAGCAGCGTGTTCCACAGCTGG
AGCAAGGACCGAAGAGATAGCCCGCTTCTTCCCTCTCGTGGTTACTACGC
AAAGATGTTCAACGAGCTGGCTGGTTGGGGTCCTCTCAAGGGTGATGTCT
CCTTCTGGAAGTCGGAGATTGAAACGCAAGCCGCAGTTCCTATTCCGATC
CCTGGCATCAAAGGAGACAGTGGTATCAGTCTGACTACTGGCTTCCGCGC
CGGTCTTCTTTACCCTCTTGGACTTGATAGTGATTCCAGACCCCAGCTCT
CTCGCACGAACGACCGATTCCTACTTGGAGGCCCTACAGACGTCCGTGGA
TTCCGTCTCTGCGGTCTTGGTCCCCATGACGGAGCAGATGCTGTCGGTGG
TGATTTGTATGCTGCAGGAAGCGCCAATCTTCTGTTCCCACTCCCCAGGG
TAGGCGCGGAGAAGCCTCTCCGCCTGCAAGCTTTTGTCAACGGCGGACGG
TTGTTGTCCCTCCGCACGGCTGACAAGAATGCACCTACTTCGAGTGCGGA
GGTCCAAAATGCCATGGCTTCCACGGTTTCCGAGCTAACCAACGGTCTGC
CTAGCATCGCGGCGGGTGTCGGACTTGTCTACGCCCATCCGGTGGCCAGG
TTCGAGCTCAACTTCTCCCTACCTCTGGTCCTTCGCAAGGGTGAGGAAGG
CCGGAAGGGGCTGCAGTTTGGAATCGGCATCAATTTCCTGTAGCTCGACC
AGAACTCGACGTTGCCATGCACTATCTCTTCGGTAGAGGTTCACGGCGCT
CGCAACACCCGCCGAGCCTTTCTGGAGCGTATCTTCAACCCCCTCCTAAG
CAGTAACCAAGACAGACCCTATACGCTCTCCGAGGCCTTGCGGGAAGTTT
CGGCACGTGCGGATAAGCTCAACAGATTCGATCTTCGCGCGCCTGCAACA
GCGTGCCGATCCGAAAGTGCTGAATGAGCAGCAACAGGCAGTCGATGAGC
GCGTTCGTGCTATTTATCAAAAGGCGCAGACTCGTCTTGGTGAATTGATG
TCCTCTCCACTTTCTGCTGATGACGAAGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0019867 | outer membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000781-T1.utr3p1 | KJC3_000781-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000781-T1.utr5p1 | KJC3_000781-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263DQH |
| DBxref | InterPro:IPR000184 |
| DBxref | PFAM:PF01103 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1931202..1933211 - |
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