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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1963706..1966093+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000795-T1 ID=KJC3_000795-T1|Name=KJC3_000795-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2388bp|location=Sequence derived from alignment at ch1:1963706..1966093+ (Aspergillus niger KJC3)
CTCTATCCCCTCTGCGGAGGTTAACTGTTTTTCCGCATGGACGGCTGATC
CGGTGCTTTGCCTTCACATCTTCACCAACCGCTACCTAAGCGACCCCGAC
CGCCCCATCATTGTCTCACCGCGTCGCAAATGAACGACCCCGCGCCGTCT
CAGGATGACCCCCAGCAGCGCACCATTCAGCGAACGTCCTACCAAGCTCC
CACTAGAGCGAGCTTAGCCAGATCGCATCCCACCCTCTTGGAGACCGATA
ATAATAAATCTCCGGCAAGAAGTATGCAGAAACCGAACCAAGCCAGATCG
AGAGCGCTCGGTCTACGAGACCGCAAGGCTCTGAGACCGTCCTTGACCTC
GACTGCCAGTCCTCTGGGCTCCCTCAAGGGCAGCAAACAGTCGCCTGTAT
CGTCCCTTTCTGGCCGTCGCTCTAGCGGTCTGGCCGCTTTTGCTGCGCCT
CCAAGGCGAGTCTCAACGAGGATCACGGCCTCCGATCTAATGTTCCGCTC
TCCGTCTGCATCCCAACAGAGTACAGAAAAAGTACCACCACCTACCGATA
CCCCCGAAAATCAATTGGCGTCGGAACTGGACAGTGCAACCGGCGATATA
GATGCGAATGAGGCGTTACAACAACCGTCGTTCCAGGACATCCTTGACGA
GCCGGATCTTCCACCGACGCCGACCCAGTTGGGCCTGGAACGGCCTCCCG
GGCGACCAAAAGGACTCCTAAGCAGTAGCCCAAGCTCACAACCGGGAAAG
TGGGGCAGACGAAGGAATACAGATGGTAGAGAACAAAGCCCGTCAAAACT
AAGGAAAGTCGATTATGGCGAGGCAGGAGAATCCGCGGAATCCGGCTTGT
TGTTGGATCGGACTTCCTTACCGGAGGAGATCTTGATGAAGCGAAAATTG
AAGAACAAGCTCGCCTCAGAACTGCAGCAATTGAAGAAGGATATCTTGGA
ATTGGAGACATGGTCGAAGGACCTGGCCCAAGACGATGCCAGTGAAGAGC
GAGATTTAACTGGGTTGATGTGAGTTTCACGCTTGTTGCGCCATGAGCGA
CTTTTCACTAACCAGACAGCAGTACTTTGTTAGCAACATCATACCCTCCT
CAATCGACCCCAACGGCCTCAGGCGAAACCTCCATATCGACTCTTATCTC
TTCATTACTCCCCTTTGCCACCAAGGGACCCCCGAGGCCCCCACCCGAGG
CCCCTCCAGTGAACCCATTTGCGCTTGGAGAGCATGCGCAAACAGAAGCA
TATCTAACAGCTCTTGCGCCATTACAGCTTACGGCGTACTCCGAATCCAT
ACCTAGCACCCCTGACCTTGTCTTGGAGAGGCACACTCTCCAGTTTTCCG
CCCCGTCACCCTTTCCCTCCAACCGCTATAAAGCATTTGTAACCTGCGAT
GTCAACCCAGAAACGCAATCCCTGGTCTCCATATCATCTGCTTCACAGAT
GACCGAAGAAGATGCAAGGACGCCAGAAGATCTGCGGCGTTGGATAGACG
CCAGGCTGGCCAATCCGTTGCTTAAGCTAGATGTCACAGGTCTGTGCTGG
GGCATTAACCGATACTGGGAGGCTATGGTATCGCGTGCTGAGTTATGGTT
ACACATGGAGGAACAACATGCTGAACTAATCAGTGGTAATGCGAAACAGA
ACCATGAGACTAAAACAAAGAGCGCAAGCTCGCAACCCCTCGGCTTGTCG
GAATTGCGTCAGATTCTACCGCACCTCGAGCGCACGTCTATGCTCTTCGA
ATCCAAGAACGGCTCACTCAAAGTCCTGGTATCATGCCAATTGACATTGG
ATGAGTGGACAAGTGAGCCACAACTAGCGCCAGGACTCAGCGTTTCTCTG
TTATCCGAGTCTGATAGCGGCTCCAGACGCAAGGTGGACCAAGAATCCAA
ACGTCTGTTCCAATCAATTCTAAATCCAAACGAGAACAACCAAGCTGGAA
GCAGCGGCAGCGGAGTCCCTGCTAGCGCAATTCTAAGAGCTACAGACTGC
GTCTTGCGCGCTTTGCTCGGTACAAACTCGAAGAAATGAACACTCACTTC
ATTCATGATATCATCAAGTGTTAATTTATTTGGACTAAACGGATGTCAAT
GGCGTTTTCTTCGATTTGGATGGGCTGGGAAGCAATAAGGGTTTGTCGAC
GTCGGCGTCATCGGCGAATTTGTTCATCGGTCTTGGTCTGTTTCATATAA
TCCCGCAGGTTTATTTTCTTCTCATGTAATTTACACGCCCCTGACTTGGC
ATCCGATGCCCGGTCAAATCATTGGATATGGATTTTGTATGGCATTACCT
ATGTGTACCTGGGTGACTTTAGTTATAGAGGAAGTGTGCGAGATCTAAGC
TATGGCAGCTGGCTGATCGTATAAGCCGTGATAATAAG back to topCoding sequence (CDS) from alignment at ch1:1963706..1966093+ >KJC3_000795-T1 ID=KJC3_000795-T1|Name=KJC3_000795-T1|organism=Aspergillus niger KJC3|type=CDS|length=3714bp|location=Sequence derived from alignment at ch1:1963706..1966093+ (Aspergillus niger KJC3)
ATGAACGACCCCGCGCCGTCTCAGGATGACCCCCAGCAGCGCACCATTCA
GCGAACGTCCTACCAAGCTCCCACTAGAGCGAGCTTAGCCAGATCGCATC
CCACCCTCTTGGAGACCGATAATAATAAATCTCCGGCAAGAAGTATGCAG
AAACCGAACCAAGCCAGATCGAGAGCGCTCGGTCTACGAGACCGCAAGGC
TCTGAGACCGTCCTTGACCTCGACTGCCAGTCCTCTGGGCTCCCTCAAGG
GCAGCAAACAGTCGCCTGTATCGTCCCTTTCTGGCCGTCGCTCTAGCGGT
CTGGCCGCTTTTGCTGCGCCTCCAAGGCGAGTCTCAACGAGGATCACGGC
CTCCGATCTAATGTTCCGCTCTCCGTCTGCATCCCAACAGAGTACAGAAA
AAGTACCACCACCTACCGATACCCCCGAAAATCAATTGGCGTCGGAACTG
GACAGTGCAACCGGCGATATAGATGCGAATGAGGCGTTACAACAACCGTC
GTTCCAGGACATCCTTGACGAGCCGGATCTTCCACCGACGCCGACCCAGT
TGGGCCTGGAACGGCCTCCCGGGCGACCAAAAGGACTCCTAAGCAGTAGC
CCAAGCTCACAACCGGGAAAGTGGGGCAGACGAAGGAATACAGATGGTAG
AGAACAAAGCCCGTCAAAACTAAGGAAAGTCGATTATGGCGAGGCAGGAG
AATCCGCGGAATCCGGCTTGTTGTTGGATCGGACTTCCTTACCGGAGGAG
ATCTTGATGAAGCGAAAATTGAAGAACAAGCTCGCCTCAGAACTGCAGCA
ATTGAAGAAGGATATCTTGGAATTGGAGACATGGTCGAAGGACCTGGCCC
AAGACGATGCCAGTGAAGAGCGAGATTTAACTGGGTTGATTACTTTGTTA
GCAACATCATACCCTCCTCAATCGACCCCAACGGCCTCAGGCGAAACCTC
CATATCGACTCTTATCTCTTCATTACTCCCCTTTGCCACCAAGGGACCCC
CGAGGCCCCCACCCGAGGCCCCTCCAGTGAACCCATTTGCGCTTGGAGAG
CATGCGCAAACAGAAGCATATCTAACAGCTCTTGCGCCATTACAGCTTAC
GGCGTACTCCGAATCCATACCTAGCACCCCTGACCTTGTCTTGGAGAGGC
ACACTCTCCAGTTTTCCGCCCCGTCACCCTTTCCCTCCAACCGCTATAAA
GCATTTGTAACCTGCGATGTCAACCCAGAAACGCAATCCCTGGTCTCCAT
ATCATCTGCTTCACAGATGACCGAAGAAGATGCAAGGACGCCAGAAGATC
TGCGGCGTTGGATAGACGCCAGGCTGGCCAATCCGTTGCTTAAGCTAGAT
GTCACAGGTCTGTGCTGGGGCATTAACCGATACTGGGAGGCTATGGTATC
GCGTGCTGAGTTATGGTTACACATGGAGGAACAACATGCTGAACTAATCA
GTGGTAATGCGAAACAGAACCATGAGACTAAAACAAAGAGCGCAAGCTCG
CAACCCCTCGGCTTGTCGGAATTGCGTCAGATTCTACCGCACCTCGAGCG
CACGTCTATGCTCTTCGAATCCAAGAACGGCTCACTCAAAGTCCTGGTAT
CATGCCAATTGACATTGGATGAGTGGACAAGTGAGCCACAACTAGCGCCA
GGACTCAGCGTTTCTCTGTTATCCGAGTCTGATAGCGGCTCCAGACGCAA
GGTGGACCAAGAATCCAAACGTCTGTTCCAATCAATTCTAAATCCAAACG
AGAACAACCAAGCTGGAAGCAGCGGCAGCGGAGTCCCTGCTAGCGCAATT
CTAAGAGCTACAGACTGCGTCTTGCGCGCTTTGCTCGGTACAAACTCGAA
GAAATGAATGAACGACCCCGCGCCGTCTCAGGATGACCCCCAGCAGCGCA
CCATTCAGCGAACGTCCTACCAAGCTCCCACTAGAGCGAGCTTAGCCAGA
TCGCATCCCACCCTCTTGGAGACCGATAATAATAAATCTCCGGCAAGAAG
TATGCAGAAACCGAACCAAGCCAGATCGAGAGCGCTCGGTCTACGAGACC
GCAAGGCTCTGAGACCGTCCTTGACCTCGACTGCCAGTCCTCTGGGCTCC
CTCAAGGGCAGCAAACAGTCGCCTGTATCGTCCCTTTCTGGCCGTCGCTC
TAGCGGTCTGGCCGCTTTTGCTGCGCCTCCAAGGCGAGTCTCAACGAGGA
TCACGGCCTCCGATCTAATGTTCCGCTCTCCGTCTGCATCCCAACAGAGT
ACAGAAAAAGTACCACCACCTACCGATACCCCCGAAAATCAATTGGCGTC
GGAACTGGACAGTGCAACCGGCGATATAGATGCGAATGAGGCGTTACAAC
AACCGTCGTTCCAGGACATCCTTGACGAGCCGGATCTTCCACCGACGCCG
ACCCAGTTGGGCCTGGAACGGCCTCCCGGGCGACCAAAAGGACTCCTAAG
CAGTAGCCCAAGCTCACAACCGGGAAAGTGGGGCAGACGAAGGAATACAG
ATGGTAGAGAACAAAGCCCGTCAAAACTAAGGAAAGTCGATTATGGCGAG
GCAGGAGAATCCGCGGAATCCGGCTTGTTGTTGGATCGGACTTCCTTACC
GGAGGAGATCTTGATGAAGCGAAAATTGAAGAACAAGCTCGCCTCAGAAC
TGCAGCAATTGAAGAAGGATATCTTGGAATTGGAGACATGGTCGAAGGAC
CTGGCCCAAGACGATGCCAGTGAAGAGCGAGATTTAACTGGGTTGATTAC
TTTGTTAGCAACATCATACCCTCCTCAATCGACCCCAACGGCCTCAGGCG
AAACCTCCATATCGACTCTTATCTCTTCATTACTCCCCTTTGCCACCAAG
GGACCCCCGAGGCCCCCACCCGAGGCCCCTCCAGTGAACCCATTTGCGCT
TGGAGAGCATGCGCAAACAGAAGCATATCTAACAGCTCTTGCGCCATTAC
AGCTTACGGCGTACTCCGAATCCATACCTAGCACCCCTGACCTTGTCTTG
GAGAGGCACACTCTCCAGTTTTCCGCCCCGTCACCCTTTCCCTCCAACCG
CTATAAAGCATTTGTAACCTGCGATGTCAACCCAGAAACGCAATCCCTGG
TCTCCATATCATCTGCTTCACAGATGACCGAAGAAGATGCAAGGACGCCA
GAAGATCTGCGGCGTTGGATAGACGCCAGGCTGGCCAATCCGTTGCTTAA
GCTAGATGTCACAGGTCTGTGCTGGGGCATTAACCGATACTGGGAGGCTA
TGGTATCGCGTGCTGAGTTATGGTTACACATGGAGGAACAACATGCTGAA
CTAATCAGTGGTAATGCGAAACAGAACCATGAGACTAAAACAAAGAGCGC
AAGCTCGCAACCCCTCGGCTTGTCGGAATTGCGTCAGATTCTACCGCACC
TCGAGCGCACGTCTATGCTCTTCGAATCCAAGAACGGCTCACTCAAAGTC
CTGGTATCATGCCAATTGACATTGGATGAGTGGACAAGTGAGCCACAACT
AGCGCCAGGACTCAGCGTTTCTCTGTTATCCGAGTCTGATAGCGGCTCCA
GACGCAAGGTGGACCAAGAATCCAAACGTCTGTTCCAATCAATTCTAAAT
CCAAACGAGAACAACCAAGCTGGAAGCAGCGGCAGCGGAGTCCCTGCTAG
CGCAATTCTAAGAGCTACAGACTGCGTCTTGCGCGCTTTGCTCGGTACAA
ACTCGAAGAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000795-T1.utr5p1 | KJC3_000795-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000795-T1.utr3p1 | KJC3_000795-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1963706..1966093 + |
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