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KJC3_000824-T1, KJC3_000824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000824-T1
Unique NameKJC3_000824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2048067..2050183-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000824-T1 ID=KJC3_000824-T1|Name=KJC3_000824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2117bp|location=Sequence derived from alignment at ch1:2048067..2050183- (Aspergillus niger KJC3)
CCGAGCCCGGAATTCTCAGCGCTTACCGTATTGTACCGACTGGGCTCGAT
CGCCGAACGCGACCGGACTGCAGGCGGTGGTTATCTCCTCTTATCTGTGA
GCAGGGCTTCCCTTCGTCCACGCCCCCCCGCCTCCCCCGATTCTTGTCGT
CTTCTCCAGAAGTCACTGCCTTAGTGGTCTCTTCCTGGAGTACTACAGAG
TACTCGATACTCTCGCCTCAGGCTGCGACACTCTTTCTGTGTTTAACCGC
CCCCCATTATCCCGGTTCCCCTGTCCCACAGGCCTACCCGTTATCGACAC
CCCTCTGAAACCGCGTTGCGCTCTCACCATGGCCATTCATCCGAATTTCC
CATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGGCTCGCGCT
ATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGTCTGACTCT
CTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGCCCAGTCCA
CTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTATCAATTCCC
TTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCTAAGGTCAA
GGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGTGACCTTTC
GGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCGAAGCCTTG
TTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAGAATGGTAT
GTCTTGACATATCGGATACACGCCAGTGGCTGGGCTTCCGCGCTTTTCCT
GGGCCGGACGTGCCTTATCATTGCACTCGATAGATGCTGACAGAATGTGC
TTTCTTGCAAAGATCGTCTTCTGAACAATCCGTGGGCCGAGCCGCCATCC
TCAAAGGATTGGGATATCCAAGCCACTCACACTCGTCACGACCCTTTGCC
TTACTACCTTGCACCTCTCTGGGACAATCACTATGCGCATCTGGACCATA
GGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCATCGTGTTCCTAAG
GAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCACGCGGTATACTTCA
AGATATCGAAGAGGACATCAGACAATTCATCCAGCGATGGAACGAGAAGC
AAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCCGCAATCATCCGAC
AGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAAACGGCCTGATGCA
CGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATGCGTGAGGCAATGA
GTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTTTGAGAGCCTGGTT
GACGACCGGGCAGCTGGATTCGGGTAAGTGTAGACTCACCTATTCAAATC
GCCGATCCATGCTTACCATAATGTTCTCACCTTCAGTCGCTGGCTCGTCC
ATTCCATCGCGTCGTATTATGGCCTGCACACTTGGTCTGTCACCGTCGGG
GAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCTATCCGCCAGCCCCAAG
CAGTCGAGCAGGACCCATATCCCCACCGGCCGGATCGAAGGCTTGCCGTC
AGGAAGCGATGATACAGCCCGGCGACGAACTGCCTCAACCGCTCTGGACG
CAGGTTTGAGCTGTTGGTATATGTGTCCATGAACTTGCGGCGAGTTCAAG
TTGACCTTCACAACTTCGCAGTCTTATAGAGCTTCGGTGTGTTTGATTCA
AAGGGTATGCTTCGGGCAGATTGTAAATTTTATCTCTTGTAATACTGGCG
TGAGTGAATTTCTACCGGTACCTGTGGGGATATAGGATCATATACAAGGT
AGGATAGACCAAGACCTACAATTGATTTGGGCACATAGGGAAGGTGCGAC
CCGCATGGACTTGTAGAGTATCTTCATGACGCGATCATCTTCGGATTATT
CTTCCCATTTGATTATCAAAATACTGTAGATAGAAGACGATCTCTTCTCT
ATGATCAATCTCTTCTTTGCCTGCACCTGGCTCTAGAGCCGTAGTTCCCC
CAACTCATCAAATCTGTCTAGAATCGGACCCTGACAGAAGCTGGATATTG
ATTGGCACGTCCTTTAC
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Coding sequence (CDS) from alignment at ch1:2048067..2050183-

>KJC3_000824-T1 ID=KJC3_000824-T1|Name=KJC3_000824-T1|organism=Aspergillus niger KJC3|type=CDS|length=3456bp|location=Sequence derived from alignment at ch1:2048067..2050183- (Aspergillus niger KJC3)
TCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTGGT
CTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCTAT
CCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGATC
GAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCCTC
AACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGCCG
AGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTCAC
GACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCGCA
TCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCATC
GTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCACGC
GGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGATG
GAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCCGC
AATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAAAC
GGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATGCG
TGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTTTG
AGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCCGA
ATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGGCT
CGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGTCT
GACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGCCC
AGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTATCA
ATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCTAA
GGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGTGA
CCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCGAA
GCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAGAA
TGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACTTG
GTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTTCT
ATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCGGA
TCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTGCC
TCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGGGC
CGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCGTC
ACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATGCG
CATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAGCA
TCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGCAC
GCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGCGA
TGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCCCC
GCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCGAA
ACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGATG
CGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTGTT
TGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCATCC
GAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCAGG
CTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGAGT
CTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTTGC
CCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTTAT
CAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGCCT
AAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCGGT
GACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCGCG
AAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGGAG
AATGTCGCTGGCTCGTCCATTCCATCGCGTCGTATTATGGCCTGCACACT
TGGTCTGTCACCGTCGGGGAACCTGCCCGCCGCGAGGCTTACGTTGGCTT
CTATCCGCCAGCCCCAAGCAGTCGAGCAGGACCCATATCCCCACCGGCCG
GATCGAAGGCTTGCCGTCAGGAAGCGATGATACAGCCCGGCGACGAACTG
CCTCAACCGCTCTGGACGCAGGTTTGAATCGTCTTCTGAACAATCCGTGG
GCCGAGCCGCCATCCTCAAAGGATTGGGATATCCAAGCCACTCACACTCG
TCACGACCCTTTGCCTTACTACCTTGCACCTCTCTGGGACAATCACTATG
CGCATCTGGACCATAGGTCATCCCAGCAGATGGAGACACGGACCGAGAAG
CATCGTGTTCCTAAGGAGCTGCGACAGAGACTAAAGCATGCACGTGCAGC
ACGCGGTATACTTCAAGATATCGAAGAGGACATCAGACAATTCATCCAGC
GATGGAACGAGAAGCAAAGTTTACTGAAGCAGGAGGGTCTGGCAGATGCC
CCGCAATCATCCGACAGTGAATCTGAAGATGAGATCGTGTTTGTGGGTCG
AAACGGCCTGATGCACGACTCGCCTCAGAGAAGAGCAAGACTCCAAAAGA
TGCGTGAGGCAATGAGTGCTCATCATGAGCATGATGGGCAGAAGATGGTG
TTTGAGAGCCTGGTTGACGACCGGGCAGCTGGATTCGGATGGCCATTCAT
CCGAATTTCCCATCTGAAGTGAACCCGAGAGGATCCCTCTCACCACAGCA
GGCTCGCGCTATCTCCGTCTGGACTGAACAGGCAGCTGCATCCTTGGAGA
GTCTGACTCTCTCCGAGTCAGTGCCGGTCGCCGATTCCAATGTGGCCTTT
GCCCAGTCCACTCCTACGCGCGCAGGCGTTCGCGGCACCACAGTCTCGTT
ATCAATTCCCTTAGATGACCCAGTCCCGACAGCGGGAAGCCCTTCCGCGC
CTAAGGTCAAGGTCTTAGGCCAGCCAACCAAGGAGACTCAGGTGGCGTCG
GTGACCTTTCGGCGCCGCGAGCCGATTCGCCGTGATAGTCTCAAGAGGCG
CGAAGCCTTGTTGAAGGGAAAGGATGGTAGTCGTCGCAGGCAGCGTTGGG
AGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000824KJC3_000824Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000824-T1KJC3_000824-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000824-T1.cdsKJC3_000824-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000824-T1.utr3p1KJC3_000824-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000824-T1.exon3KJC3_000824-T1.exon3Aspergillus niger KJC3exon
KJC3_000824-T1.exon2KJC3_000824-T1.exon2Aspergillus niger KJC3exon
KJC3_000824-T1.exon1KJC3_000824-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000824-T1.utr5p1KJC3_000824-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036867
DBxrefInterPro:IPR025952
DBxrefPFAM:PF13902
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2048067..2050183 -
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