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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2080507..2083171- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000835-T1 ID=KJC3_000835-T1|Name=KJC3_000835-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2665bp|location=Sequence derived from alignment at ch1:2080507..2083171- (Aspergillus niger KJC3)
TCCCTCTCTCTCCGCTCATTATCGTTATTCTCTCACCCCAAAGCCTGGAG
AACGAACCCCTGTGGATACTTGCATATCATCTTGTCTCTTCTCCCCTTAG
AAACAGACCGACCGATCTCACTTTTCTCTTACATTCAGTGATACCTACTC
GGCTCTGTTGGTGTAGGAATATGTTCTGACTGGCCCGGAACAAATCATCC
GTAGTTAATACCTCTCTTTTCTGATTATCATCACTCTTCGCATTTCTTTA
TTGTCTCTTTTTGCACTGGTCCTTAATTTAGATCATCATTTCTTCATCAT
GAGCTCCGGCATCCCACCGTGGCGTGTTGCGGCTTCAGCCACCGCTACCA
CCTCAATTCACTCTGGCCATGGTATGCTTCTGTTCCCGCCCGTGATCTTT
GTTCAGACTTGACTAACGTGGCAGTAGTGGCCCCAGCTTATATCCCAGTG
CAAGCACGCCGTAGTATCGCGCCCACAAAAGCCACGAACCCCGGTCCTTC
ACCTACAACCCCGACGACGTCTACCGATGCCGCCACCCGCAAACGAGTAG
AATTCCCAGAAGCTGTCCGCAAATATGTGCAACGCAGCTTTGCGCCCGAA
AACCGCCTTTCCGGGGTCGAACGGAGTGAGATGGAGGCGAAACTCAAGTC
GGTCATCACAGAGGCAGCAGAGGGTAACATGCTTGACAAGATCGACTGGG
AAACCCTGCCTCTGCCGCAGGTCATGGTTCAAAATGACCGCAACATGGTG
CTCGCCAGCCCAGGTGTCTCGACTTGGGCCGCATTTGGGACACTTTCGCC
GAAGAAGTCGAGCACCCCGTTGGTCGACCTATCGAAAAAGAGGAAATCGG
TGGAGTACCACGGAGACGCGAGCAGCTGTCCACCATGGAGACAAACTAAC
AACCAGAATGCCTTTGAAGACCGAGTCACTTATCCTTCCACAGACAAGCG
GCAGAAGATGGACAGTAAGAACCCAAGTAAGTCAAAAGCTAATCTGGAGA
TGCGGAGGAAACGTTTCGAGGACGCACAAGGACGACATGGATCTTCACCC
TCTTCCCGCGGTGCATCACCGACCCCCAATGCAAACCAAGGCCCTGTTGT
CGGAAGGTGCCAGGAGCTCGAGAAGAATTACTTCCGCCTGACTTCTGCAC
CGAATCCGGATACCGTCCGTCCCTTGCCGGTCTTGATGAAAACATTAGAC
CTACTGAAGAAGAAATGGAAAAAGGACAACAACTATGGCTATATTTGTGA
CCAGTTCAAATCCCTCCGTCAAGATTTGACTGTGCAGCATATCAGGAACG
AATTCACTGTCAGCGTCTATGAAATCCATGCCCGGATTGCCCTAGAGAAA
GGTGACCTTGGTGAGTATAATCAGTGCCAGACTCAGCTACGAGCGTTGTA
CGCACAGCAACTTGGCGGTCATCCTACGGAGTTCAAGGCCTATCGTATCC
TCTACTTCATCCATACCCGCAACTGGACGGCCATGAACGATGCCTTGGCC
GATCTAACTGCAGCAGACAAACGGGATCTTGCTGTGAAACATGCGTTGGA
TGTCCGTTCCGCTCTTGCTCTTGGGAACTATCACCGTTTCTTCCAGCTTT
ATCTCGATACCCCGAATATGGGTGCTTATCTAATGGACATGTTCGTGGAT
CGTGAGCGACTTTCTGCACTCGCAGCAATTTGTAAAGCGTAAGTATTTGT
GCAGAGTTTACATGTGACGCCCGCTAACTTTGGCAACACAGATACAAACC
CGATGTAAACATCCGTTTTATTACTGAAGAACTTGGTTTCGAGTCCGACG
AGCAGAGCGCACGCTTTATTTTGGACCATACTTCGGAGGACCTCCTCCAA
GAGAAAGATGGCGTGGTGAGACTGCTTACGGGTGGCAGGGCCGGCCAACT
CTTCGAAGGAGCCAAGGCCGAGGCCCACCGAATTGTCGATATCAAGGGAC
AGATCTAAGTTCTGTATCTCTCGCTCTTACTTTCTTTTTCTTTCCTCTTT
GCAACCTGCGGTTTCACTTTCACCTTCCGACTCCCTCGTCACCATTCTGG
ATATTTCTAGCACACCCTAGCTTTCCCTATTCTGTTCGTTTCTTCAGGGC
GCTTGGAGTTCTGTTCATTCTGTTTCCTTGCCCCCGGCATTAGAGGCGTC
CTGCATTAACCGCTTGCGATCTATACCCATTTTGGCTTGAGGAGGATTGG
TTGTACACAGAATAAAAAGTCGATGGATGGAAGGCAGAAGTGGGTATAAG
GGAAGGCGTGTAACGTCTGTCTGATAATATTTCGGTAGCGCAGCTTCAAT
ACAATGATCATTGTGAATTTCAAAACATATCAAGTATGGGCAGCAGCCCA
TTGGACCCACCACGGCGACAAATGATACATAGTCTGTCTATCCAGTAGGG
GATCAGAAACCGTCATTCATTATTACCATACCCAGTGCGCGAATTTCATC
CCCTCTTAACCTTATAACCTCCCCTCAATCCAATAGCATCATACCACTAC
CTTAAACATCAGACACATCCATCCATCCAAACATTATGTATCCAACAGGA
CACACCACCACAATGGACCCACAATGAGGGGTAAGCCAAAGAGTCGAGAA
GTAGGTACCCCGCAATTCATCAACAAGTGAGATGAGGTCAAGTTACATGA
ATAAAGCAAGTCGAC back to topCoding sequence (CDS) from alignment at ch1:2080507..2083171- >KJC3_000835-T1 ID=KJC3_000835-T1|Name=KJC3_000835-T1|organism=Aspergillus niger KJC3|type=CDS|length=4653bp|location=Sequence derived from alignment at ch1:2080507..2083171- (Aspergillus niger KJC3)
ATACAAACCCGATGTAAACATCCGTTTTATTACTGAAGAACTTGGTTTCG
AGTCCGACGAGCAGAGCGCACGCTTTATTTTGGACCATACTTCGGAGGAC
CTCCTCCAAGAGAAAGATGGCGTGGTGAGACTGCTTACGGGTGGCAGGGC
CGGCCAACTCTTCGAAGGAGCCAAGGCCGAGGCCCACCGAATTGTCGATA
TCAAGGGACAGATCTAATGGCCCCAGCTTATATCCCAGTGCAAGCACGCC
GTAGTATCGCGCCCACAAAAGCCACGAACCCCGGTCCTTCACCTACAACC
CCGACGACGTCTACCGATGCCGCCACCCGCAAACGAGTAGAATTCCCAGA
AGCTGTCCGCAAATATGTGCAACGCAGCTTTGCGCCCGAAAACCGCCTTT
CCGGGGTCGAACGGAGTGAGATGGAGGCGAAACTCAAGTCGGTCATCACA
GAGGCAGCAGAGGGTAACATGCTTGACAAGATCGACTGGGAAACCCTGCC
TCTGCCGCAGGTCATGGTTCAAAATGACCGCAACATGGTGCTCGCCAGCC
CAGGTGTCTCGACTTGGGCCGCATTTGGGACACTTTCGCCGAAGAAGTCG
AGCACCCCGTTGGTCGACCTATCGAAAAAGAGGAAATCGGTGGAGTACCA
CGGAGACGCGAGCAGCTGTCCACCATGGAGACAAACTAACAACCAGAATG
CCTTTGAAGACCGAGTCACTTATCCTTCCACAGACAAGCGGCAGAAGATG
GACAGTAAGAACCCAAGTAAGTCAAAAGCTAATCTGGAGATGCGGAGGAA
ACGTTTCGAGGACGCACAAGGACGACATGGATCTTCACCCTCTTCCCGCG
GTGCATCACCGACCCCCAATGCAAACCAAGGCCCTGTTGTCGGAAGGTGC
CAGGAGCTCGAGAAGAATTACTTCCGCCTGACTTCTGCACCGAATCCGGA
TACCGTCCGTCCCTTGCCGGTCTTGATGAAAACATTAGACCTACTGAAGA
AGAAATGGAAAAAGGACAACAACTATGGCTATATTTGTGACCAGTTCAAA
TCCCTCCGTCAAGATTTGACTGTGCAGCATATCAGGAACGAATTCACTGT
CAGCGTCTATGAAATCCATGCCCGGATTGCCCTAGAGAAAGGTGACCTTG
GTGAGTATAATCAGTGCCAGACTCAGCTACGAGCGTTGTACGCACAGCAA
CTTGGCGGTCATCCTACGGAGTTCAAGGCCTATCGTATCCTCTACTTCAT
CCATACCCGCAACTGGACGGCCATGAACGATGCCTTGGCCGATCTAACTG
CAGCAGACAAACGGGATCTTGCTGTGAAACATGCGTTGGATGTCCGTTCC
GCTCTTGCTCTTGGGAACTATCACCGTTTCTTCCAGCTTTATCTCGATAC
CCCGAATATGGGTGCTTATCTAATGGACATGTTCGTGGATCGTGAGCGAC
TTTCTGCACTCGCAGCAATTTGTAAAGCATGAGCTCCGGCATCCCACCGT
GGCGTGTTGCGGCTTCAGCCACCGCTACCACCTCAATTCACTCTGGCCAT
GATACAAACCCGATGTAAACATCCGTTTTATTACTGAAGAACTTGGTTTC
GAGTCCGACGAGCAGAGCGCACGCTTTATTTTGGACCATACTTCGGAGGA
CCTCCTCCAAGAGAAAGATGGCGTGGTGAGACTGCTTACGGGTGGCAGGG
CCGGCCAACTCTTCGAAGGAGCCAAGGCCGAGGCCCACCGAATTGTCGAT
ATCAAGGGACAGATCTAATGGCCCCAGCTTATATCCCAGTGCAAGCACGC
CGTAGTATCGCGCCCACAAAAGCCACGAACCCCGGTCCTTCACCTACAAC
CCCGACGACGTCTACCGATGCCGCCACCCGCAAACGAGTAGAATTCCCAG
AAGCTGTCCGCAAATATGTGCAACGCAGCTTTGCGCCCGAAAACCGCCTT
TCCGGGGTCGAACGGAGTGAGATGGAGGCGAAACTCAAGTCGGTCATCAC
AGAGGCAGCAGAGGGTAACATGCTTGACAAGATCGACTGGGAAACCCTGC
CTCTGCCGCAGGTCATGGTTCAAAATGACCGCAACATGGTGCTCGCCAGC
CCAGGTGTCTCGACTTGGGCCGCATTTGGGACACTTTCGCCGAAGAAGTC
GAGCACCCCGTTGGTCGACCTATCGAAAAAGAGGAAATCGGTGGAGTACC
ACGGAGACGCGAGCAGCTGTCCACCATGGAGACAAACTAACAACCAGAAT
GCCTTTGAAGACCGAGTCACTTATCCTTCCACAGACAAGCGGCAGAAGAT
GGACAGTAAGAACCCAAGTAAGTCAAAAGCTAATCTGGAGATGCGGAGGA
AACGTTTCGAGGACGCACAAGGACGACATGGATCTTCACCCTCTTCCCGC
GGTGCATCACCGACCCCCAATGCAAACCAAGGCCCTGTTGTCGGAAGGTG
CCAGGAGCTCGAGAAGAATTACTTCCGCCTGACTTCTGCACCGAATCCGG
ATACCGTCCGTCCCTTGCCGGTCTTGATGAAAACATTAGACCTACTGAAG
AAGAAATGGAAAAAGGACAACAACTATGGCTATATTTGTGACCAGTTCAA
ATCCCTCCGTCAAGATTTGACTGTGCAGCATATCAGGAACGAATTCACTG
TCAGCGTCTATGAAATCCATGCCCGGATTGCCCTAGAGAAAGGTGACCTT
GGTGAGTATAATCAGTGCCAGACTCAGCTACGAGCGTTGTACGCACAGCA
ACTTGGCGGTCATCCTACGGAGTTCAAGGCCTATCGTATCCTCTACTTCA
TCCATACCCGCAACTGGACGGCCATGAACGATGCCTTGGCCGATCTAACT
GCAGCAGACAAACGGGATCTTGCTGTGAAACATGCGTTGGATGTCCGTTC
CGCTCTTGCTCTTGGGAACTATCACCGTTTCTTCCAGCTTTATCTCGATA
CCCCGAATATGGGTGCTTATCTAATGGACATGTTCGTGGATCGTGAGCGA
CTTTCTGCACTCGCAGCAATTTGTAAAGCATGAGCTCCGGCATCCCACCG
TGGCGTGTTGCGGCTTCAGCCACCGCTACCACCTCAATTCACTCTGGCCA
TGATACAAACCCGATGTAAACATCCGTTTTATTACTGAAGAACTTGGTTT
CGAGTCCGACGAGCAGAGCGCACGCTTTATTTTGGACCATACTTCGGAGG
ACCTCCTCCAAGAGAAAGATGGCGTGGTGAGACTGCTTACGGGTGGCAGG
GCCGGCCAACTCTTCGAAGGAGCCAAGGCCGAGGCCCACCGAATTGTCGA
TATCAAGGGACAGATCTAATGGCCCCAGCTTATATCCCAGTGCAAGCACG
CCGTAGTATCGCGCCCACAAAAGCCACGAACCCCGGTCCTTCACCTACAA
CCCCGACGACGTCTACCGATGCCGCCACCCGCAAACGAGTAGAATTCCCA
GAAGCTGTCCGCAAATATGTGCAACGCAGCTTTGCGCCCGAAAACCGCCT
TTCCGGGGTCGAACGGAGTGAGATGGAGGCGAAACTCAAGTCGGTCATCA
CAGAGGCAGCAGAGGGTAACATGCTTGACAAGATCGACTGGGAAACCCTG
CCTCTGCCGCAGGTCATGGTTCAAAATGACCGCAACATGGTGCTCGCCAG
CCCAGGTGTCTCGACTTGGGCCGCATTTGGGACACTTTCGCCGAAGAAGT
CGAGCACCCCGTTGGTCGACCTATCGAAAAAGAGGAAATCGGTGGAGTAC
CACGGAGACGCGAGCAGCTGTCCACCATGGAGACAAACTAACAACCAGAA
TGCCTTTGAAGACCGAGTCACTTATCCTTCCACAGACAAGCGGCAGAAGA
TGGACAGTAAGAACCCAAGTAAGTCAAAAGCTAATCTGGAGATGCGGAGG
AAACGTTTCGAGGACGCACAAGGACGACATGGATCTTCACCCTCTTCCCG
CGGTGCATCACCGACCCCCAATGCAAACCAAGGCCCTGTTGTCGGAAGGT
GCCAGGAGCTCGAGAAGAATTACTTCCGCCTGACTTCTGCACCGAATCCG
GATACCGTCCGTCCCTTGCCGGTCTTGATGAAAACATTAGACCTACTGAA
GAAGAAATGGAAAAAGGACAACAACTATGGCTATATTTGTGACCAGTTCA
AATCCCTCCGTCAAGATTTGACTGTGCAGCATATCAGGAACGAATTCACT
GTCAGCGTCTATGAAATCCATGCCCGGATTGCCCTAGAGAAAGGTGACCT
TGGTGAGTATAATCAGTGCCAGACTCAGCTACGAGCGTTGTACGCACAGC
AACTTGGCGGTCATCCTACGGAGTTCAAGGCCTATCGTATCCTCTACTTC
ATCCATACCCGCAACTGGACGGCCATGAACGATGCCTTGGCCGATCTAAC
TGCAGCAGACAAACGGGATCTTGCTGTGAAACATGCGTTGGATGTCCGTT
CCGCTCTTGCTCTTGGGAACTATCACCGTTTCTTCCAGCTTTATCTCGAT
ACCCCGAATATGGGTGCTTATCTAATGGACATGTTCGTGGATCGTGAGCG
ACTTTCTGCACTCGCAGCAATTTGTAAAGCATGAGCTCCGGCATCCCACC
GTGGCGTGTTGCGGCTTCAGCCACCGCTACCACCTCAATTCACTCTGGCC
ATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000835-T1.utr3p1 | KJC3_000835-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000835-T1.utr5p1 | KJC3_000835-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092625AX |
| DBxref | InterPro:IPR005062 |
| DBxref | PFAM:PF03399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2080507..2083171 - |
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