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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2226442..2227598- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000888-T1 ID=KJC3_000888-T1|Name=KJC3_000888-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1157bp|location=Sequence derived from alignment at ch1:2226442..2227598- (Aspergillus niger KJC3)
CCAATACTCTCACCTCAATCTTATAGCTGGAACTATATCTCAGGGTTACT
TCTCAAAATGAATATATCGGCTCAGGATCCTTCCCTACGCGAGACGAATT
GGCCTGCTGTGGCTAGCTATGTCGCCGCGCGCAAGGACACTTATCCGTTC
ATCGATCCCGCCAAAGCCGACCTGACGGGCAAGTCGGTCTTGATTACAGG
CGCCTCCAAGGGCATTGGTAAGGCCACTGCGATCAGCTTCGCCATCGCAG
GCTGCTCAAAGATACTACTGGCCGCTCGTTCGGACCTGGCCGACGTCGAG
ACAGCCGTCCACGACGCCGCTATAAAGGCAAACCGGCCCCAGCCATTAGT
GCATTCCCTGAAGGTGGACGTAACCTCGGAGGACTCTGTACGAGCGGCCG
CTGAGACCGCGGCAGACATGCTCGGCGGCAGCCTCGATGTCCTGATGAAT
AACGCCGGCTACTTGGAGGAGTGGAAACCTATCGCCGAGTCCGAGCCGAG
CGAGTGGTGGCGGACTTGGGAGGTCAACATCAAAGGCACCTATCTCGCCG
CCCACTTCTTCCTACCGCTTCTGCTTAAGTCGCAGACCAAGACCATCATC
AACATCAGCAGCGGTGGTGCCCACGTTATGTTTCCCGGTGCGTCGGCCTA
CCAGACGACCAAGTTCGCCCTCTGCCGCCTCACCGAATTCATGGACAATG
AATACTACCAGCAAGGTTTGATCGCCATCTCGCTCCACCCGGGCGCCGTG
AAGACCGAGCTGGCCATGAACATGCCACCAGAGAGGCAAGTCGTCCTGAC
CGATACGCCGGAGCTGGCTGCCGACACGCTGGTCTGGCTCGCCCGTGAGC
GACGCGACTGGCTCGCTGGCCGATTCGCCTCGGTGAGCTGGGACATGGAG
GAGCTGGAGCAGAAGAAGCAGGACATTCTCCAAAGGAACTTATTCAAGTT
CCGCGTGGTGATCTGAGTCGGGCGGTGCACCCTCTAAGTAGTAGTCTAAA
TATATTCGTTGATTACGACCATTCTTTCATTACATGATACGTCCGAAGTT
ATATATCGTGTGGATCAGATATTGCTACTTTATCTTTCTCTGATCTTCTT
TCACATACTCTGATGTGTATATAAGAACTGAATTACTTACATCTGAGTTC
TCGGCAT back to topCoding sequence (CDS) from alignment at ch1:2226442..2227598- >KJC3_000888-T1 ID=KJC3_000888-T1|Name=KJC3_000888-T1|organism=Aspergillus niger KJC3|type=CDS|length=909bp|location=Sequence derived from alignment at ch1:2226442..2227598- (Aspergillus niger KJC3)
ATGAATATATCGGCTCAGGATCCTTCCCTACGCGAGACGAATTGGCCTGC
TGTGGCTAGCTATGTCGCCGCGCGCAAGGACACTTATCCGTTCATCGATC
CCGCCAAAGCCGACCTGACGGGCAAGTCGGTCTTGATTACAGGCGCCTCC
AAGGGCATTGGTAAGGCCACTGCGATCAGCTTCGCCATCGCAGGCTGCTC
AAAGATACTACTGGCCGCTCGTTCGGACCTGGCCGACGTCGAGACAGCCG
TCCACGACGCCGCTATAAAGGCAAACCGGCCCCAGCCATTAGTGCATTCC
CTGAAGGTGGACGTAACCTCGGAGGACTCTGTACGAGCGGCCGCTGAGAC
CGCGGCAGACATGCTCGGCGGCAGCCTCGATGTCCTGATGAATAACGCCG
GCTACTTGGAGGAGTGGAAACCTATCGCCGAGTCCGAGCCGAGCGAGTGG
TGGCGGACTTGGGAGGTCAACATCAAAGGCACCTATCTCGCCGCCCACTT
CTTCCTACCGCTTCTGCTTAAGTCGCAGACCAAGACCATCATCAACATCA
GCAGCGGTGGTGCCCACGTTATGTTTCCCGGTGCGTCGGCCTACCAGACG
ACCAAGTTCGCCCTCTGCCGCCTCACCGAATTCATGGACAATGAATACTA
CCAGCAAGGTTTGATCGCCATCTCGCTCCACCCGGGCGCCGTGAAGACCG
AGCTGGCCATGAACATGCCACCAGAGAGGCAAGTCGTCCTGACCGATACG
CCGGAGCTGGCTGCCGACACGCTGGTCTGGCTCGCCCGTGAGCGACGCGA
CTGGCTCGCTGGCCGATTCGCCTCGGTGAGCTGGGACATGGAGGAGCTGG
AGCAGAAGAAGCAGGACATTCTCCAAAGGAACTTATTCAAGTTCCGCGTG
GTGATCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000888-T1.utr3p1 | KJC3_000888-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000888-T1.utr5p1 | KJC3_000888-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2226442..2227598 - |
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