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KJC3_000891-T1, KJC3_000891-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000891-T1
Unique NameKJC3_000891-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2237374..2239290+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000891-T1 ID=KJC3_000891-T1|Name=KJC3_000891-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1917bp|location=Sequence derived from alignment at ch1:2237374..2239290+ (Aspergillus niger KJC3)
CTCCACAGATTTGAACACACCCATATGGAGTGACCCTTCGCATAGCTTTC
AGGCCCCCAAATATCAAGCGCCACAAGCTGCAGTATCGTCTGATGCGGCA
ACTACTGCAAATCAACAAGACCAATCTATCATCAAGCATCTGGGGCGCCT
AGTGCCCTTAACACCGAGTGTCGACCGATTTGCAGGATCAACGACTGGTA
TTTATTTTATTCGTTGCGCTGAAGCGGCTTATAAGTCTTTGTTCAATCAT
GAAGAGGGTTTTCCAGATGTTGTAAATCGGCTCCATCTGCTCGGGCCTGG
TCCAGAATATTCCCAAACTCGACATTTGTCAAAGTCAAGTAATATTTCTC
GACCACCGCATTTCCTGCTTGAGAACACACGAGCGTTTTACCTGCGTGGG
GTGACAGACTTTTCAAAATTTTGGTCATCAATATGGCCAATATTCATGGA
GAAACAGTTTCTTTCTGCCTTCCACAGGGTTTTCGATCTTGTTGAGACCC
ACGACCCTAACCTGTCACCTTCTGACTATGTTATCCTGAGACAAATATTT
CTTGTCCTCTCTATTACAGCGTGGCAGAATCGCTCACCCACGGAGTGCAA
TTCATACTACCTCAATGCCTTGGAATGTTCCCGGTTAACAACCGCATCCG
AAAACGAGGGCCTTGCAGGACTTCAGTCCCTGCTTTTGACTTGTCTATAT
CTTCAGCTCACACGGAAACATGAGGAATGGATTCAGACAGCTGGTCAGGC
TGTTCGTCTCGCGCAATCTCTAGGACTCCATCGGCATTCTAGGCGTTTCC
GCTTTTGCGCTGGGGAAATGGAATTAAGAAAACGGATGTGGTGGTGCGTT
TACGCAGTGGACGTGTAAGTTTTCTGTCAAACAAATTGCTCTCTCCAAAC
CTCTAATTCCCGAAAAGCGCGTGCAGCGTAGTACATGGCTTGCCGAAGCT
GATCCAAGACGATGACGTGGATACCGACCTGCCTATTGACACGGATCTCG
ACGATGTGACTGCCTCTGACATACCGCTCCCGCTACCGGGAGAGACAACA
AGCATGGCTACCTTTATCCTTTACGTCAAGCTGCTCAGACTTTTCTCTAG
CTGCCTCAAGTCGCTATATACCACTACTAAGCGGCGAAATGGTGTCGCCA
AAATTACCGCATTGGACCACGAGCTCTCGGTGTGGCACCATAGCGTAGTC
CGATTCCAAGGCAGTGGGATGAAAGAGAACGACGATGCTCTACCGGACAC
CCTTCACATCAATTCATCAGGTCAATCGTTCGAGACACTGTTTCTACACT
TCTTAGGAAACGTGGCTGTTGTGCTAATTCACCAGCCAGCATTGACATTT
GACCCGAAACACCCCCAATTCATGAAGAGCTTGTCAAGATGCGTTCGTGC
AGCACTCAATATACTCGGCCTTTTGGAAAGCAGTCATGATGGCCAACGAC
TTCATTGTCTTTTTCCGAACAAGTCATCAATAGTCTTCCAGTCGACGCTA
TTGTGCTTCTACCATCAATGGATGTGCATATCATTTTCGTTAACACCAAG
TCACAATCTCAACCCACTGATGGGTAGGATAGTAGATACTGCCCTCAAGC
TGCTCGATAAGCACAAGGCGGAACTGGTTGCTCCTGATACCGGGCCAAAC
ACATGTATTGACATCGAAACTATCTCAGCTGCTGAAGACCTAGTTCGATT
GTTTTCCAGACGCTTGGATAATGCAAGACATGCGTCTGTGTCAATTGAAG
GGACTCCTTCTATGGCCCAAAATTCTCTTCCAACATCAACATTCCCGCCG
CAAGCTGATCTGGGTGGCCATGAACCGGCGAATTTCGAAAGTGAGTCACC
AATGGCGACGATTCCTCTTGACTTTGGAATATGGGATCACGATATCCTCG
ATTTTGACTGGCCTTGA
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Coding sequence (CDS) from alignment at ch1:2237374..2239290+

>KJC3_000891-T1 ID=KJC3_000891-T1|Name=KJC3_000891-T1|organism=Aspergillus niger KJC3|type=CDS|length=2838bp|location=Sequence derived from alignment at ch1:2237374..2239290+ (Aspergillus niger KJC3)
ATGGAGAAACAGTTTCTTTCTGCCTTCCACAGGGTTTTCGATCTTGTTGA
GACCCACGACCCTAACCTGTCACCTTCTGACTATGTTATCCTGAGACAAA
TATTTCTTGTCCTCTCTATTACAGCGTGGCAGAATCGCTCACCCACGGAG
TGCAATTCATACTACCTCAATGCCTTGGAATGTTCCCGGTTAACAACCGC
ATCCGAAAACGAGGGCCTTGCAGGACTTCAGTCCCTGCTTTTGACTTGTC
TATATCTTCAGCTCACACGGAAACATGAGGAATGGATTCAGACAGCTGGT
CAGGCTGTTCGTCTCGCGCAATCTCTAGGACTCCATCGGCATTCTAGGCG
TTTCCGCTTTTGCGCTGGGGAAATGGAATTAAGAAAACGGATGTGGTGGT
GCGTTTACGCAGTGGACGTCGCGTGCAGCGTAGTACATGGCTTGCCGAAG
CTGATCCAAGACGATGACGTGGATACCGACCTGCCTATTGACACGGATCT
CGACGATGTGACTGCCTCTGACATACCGCTCCCGCTACCGGGAGAGACAA
CAAGCATGGCTACCTTTATCCTTTACGTCAAGCTGCTCAGACTTTTCTCT
AGCTGCCTCAAGTCGCTATATACCACTACTAAGCGGCGAAATGGTGTCGC
CAAAATTACCGCATTGGACCACGAGCTCTCGGTGTGGCACCATAGCGTAG
TCCGATTCCAAGGCAGTGGGATGAAAGAGAACGACGATGCTCTACCGGAC
ACCCTTCACATCAATTCATCAGGTCAATCGTTCGAGACACTGTTTCTACA
CTTCTTAGGAAACGTGGCTGTTGTGCTAATTCACCAGCCAGCATTGACAT
TTGACCCGAAACACCCCCAATTCATGAAGAGCTTGTCAAGATGCGTTCGT
GCAGCACTCAATATACTCGGCCTTTTGGAAAGCAGTCATGATGGCCAACG
ACTTCATTGTCTTTTTCCGAACAAGTCATCAATAGTCTTCCAGTCGACGC
TATTGTGCTTCTACCATCAATGGATGTGCATATCATTTTCGTTAACACCA
AGTCACAATCTCAACCCACTGATGGGTAGGATAGTAGATACTGCCCTCAA
GCTGCTCGATAAGCACAAGGCGGAACTGGTTGCTCCTGATACCGGGCCAA
ACACATGTATTGACATCGAAACTATCTCAGCTGCTGAAGACCTAGTTCGA
TTGTTTTCCAGACGCTTGGATAATGCAAGACATGCGTCTGTGTCAATTGA
AGGGACTCCTTCTATGGCCCAAAATTCTCTTCCAACATCAACATTCCCGC
CGCAAGCTGATCTGGGTGGCCATGAACCGGCGAATTTCGAAAGTGAGTCA
CCAATGGCGACGATTCCTCTTGACTTTGGAATATGGGATCACGATATCCT
CGATTTTGACTGGCCTTGAATGGAGAAACAGTTTCTTTCTGCCTTCCACA
GGGTTTTCGATCTTGTTGAGACCCACGACCCTAACCTGTCACCTTCTGAC
TATGTTATCCTGAGACAAATATTTCTTGTCCTCTCTATTACAGCGTGGCA
GAATCGCTCACCCACGGAGTGCAATTCATACTACCTCAATGCCTTGGAAT
GTTCCCGGTTAACAACCGCATCCGAAAACGAGGGCCTTGCAGGACTTCAG
TCCCTGCTTTTGACTTGTCTATATCTTCAGCTCACACGGAAACATGAGGA
ATGGATTCAGACAGCTGGTCAGGCTGTTCGTCTCGCGCAATCTCTAGGAC
TCCATCGGCATTCTAGGCGTTTCCGCTTTTGCGCTGGGGAAATGGAATTA
AGAAAACGGATGTGGTGGTGCGTTTACGCAGTGGACGTCGCGTGCAGCGT
AGTACATGGCTTGCCGAAGCTGATCCAAGACGATGACGTGGATACCGACC
TGCCTATTGACACGGATCTCGACGATGTGACTGCCTCTGACATACCGCTC
CCGCTACCGGGAGAGACAACAAGCATGGCTACCTTTATCCTTTACGTCAA
GCTGCTCAGACTTTTCTCTAGCTGCCTCAAGTCGCTATATACCACTACTA
AGCGGCGAAATGGTGTCGCCAAAATTACCGCATTGGACCACGAGCTCTCG
GTGTGGCACCATAGCGTAGTCCGATTCCAAGGCAGTGGGATGAAAGAGAA
CGACGATGCTCTACCGGACACCCTTCACATCAATTCATCAGGTCAATCGT
TCGAGACACTGTTTCTACACTTCTTAGGAAACGTGGCTGTTGTGCTAATT
CACCAGCCAGCATTGACATTTGACCCGAAACACCCCCAATTCATGAAGAG
CTTGTCAAGATGCGTTCGTGCAGCACTCAATATACTCGGCCTTTTGGAAA
GCAGTCATGATGGCCAACGACTTCATTGTCTTTTTCCGAACAAGTCATCA
ATAGTCTTCCAGTCGACGCTATTGTGCTTCTACCATCAATGGATGTGCAT
ATCATTTTCGTTAACACCAAGTCACAATCTCAACCCACTGATGGGTAGGA
TAGTAGATACTGCCCTCAAGCTGCTCGATAAGCACAAGGCGGAACTGGTT
GCTCCTGATACCGGGCCAAACACATGTATTGACATCGAAACTATCTCAGC
TGCTGAAGACCTAGTTCGATTGTTTTCCAGACGCTTGGATAATGCAAGAC
ATGCGTCTGTGTCAATTGAAGGGACTCCTTCTATGGCCCAAAATTCTCTT
CCAACATCAACATTCCCGCCGCAAGCTGATCTGGGTGGCCATGAACCGGC
GAATTTCGAAAGTGAGTCACCAATGGCGACGATTCCTCTTGACTTTGGAA
TATGGGATCACGATATCCTCGATTTTGACTGGCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000891KJC3_000891Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000891-T1.utr5p1KJC3_000891-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000891-T1.exon1KJC3_000891-T1.exon1Aspergillus niger KJC3exon
KJC3_000891-T1.exon2KJC3_000891-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000891-T1.cdsKJC3_000891-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000891-T1KJC3_000891-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2237374..2239290 +
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