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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2267673..2270181- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000905-T2 ID=KJC3_000905-T2|Name=KJC3_000905-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2509bp|location=Sequence derived from alignment at ch1:2267673..2270181- (Aspergillus niger KJC3)
TCTATTTACATAAGTAGATCCCCTCGTGGCACATAGCGACCACGTACGCA
TCGAATTACTCGACAGCCATGGAGGGGGACATAAAAGAAGTTGCACAGCA
GTGCGTCAACCTTTTCACGCAGTGTTTGAAAATCCCGACACTCATGGAAA
ACGAATGGGCTGAAAACCGCCTTGCGGATATGAACTTATGGATATCAGGT
ACCGGAGCCTGCGCCCGAGGACGAGCTTCTTTGGACTGGAGACTAGCCTC
GAGGCCCGAAGCTCGTGATGTAATCGTCAATTTATTGCGCCTTCTCAGTA
CCGTGATTGAAGATTGCACAATTCGGAGTCGAAATCAAGGCTTTTCGCGC
AGTTATCACGATGAGGAAGACCTCGCCTCTTCTGAGCATGAAAAGCCGGG
GCGGTCGTTTTCCCCATGGTCCGATGATTCCAGCTCTGATAGCCAGTCGA
CGGACCGTCACGAGCTGCGAAAACCATCGGGAAATCTGTTGTATGAGTCA
ATGTATAACATCGAGTCGATGCTGGATCAACTTTCCCGGGTCGCGGTTGC
CATACGTCGCTCTGGAAGGCGCTCACGGTGGCAAAAGGCAGACCAACTGT
TCAACGCAACAGAGCACCAGGAGCTGGAGGGCCACCTTGTCGGAATGTTA
CTCTTTCAACTGAAGGGTCGTACTCAAGAAAGAGACCCATCAAAGTTGGA
TGAAGTACAATTGCGGCTGGTACACTGTAACCTAAAGCGTCGAAATCGCT
TTTTGTATTCTCAAAAACATGCCATGGGTCTGGATGTTGGCTGCGTACGA
CATACACCTGTATCGAAGCCAGCTGGATCAGCACAGAAGGAGACACCCGA
AAGGAAACCTAGCCCTAAATCCTCGGGTAATAGCCCAGTGCACGCCAATA
AAACAATAATTACGGGAACCAGTGCCTCCAGATTGTCCGATGGCTTTCAA
TTACCACATCTAGACCACGCTATATCCGTCACGTCTTCCGCAGTATCATC
TACAGCACTCAATATAGATTACCCGCGCCCGCCTCAACTCAAAGATGATG
CGCGGCTCTTTCGGTGTCCCTGTTGCTGCGAAGCACTCCCTGTAACAATG
ACAGAGAATATCAGGTGGAGGTGAGACTCTTGACGCAAATCCAATCACGG
CCACACTAACAAAAGATTAGGAAGCATATCGAAGATGATTTGAGCCCATA
CACCTGTGTTTTGGCTGGTTGTGATCAACCTTATGTTCTTTATAATACAA
AGGATAGTTGGCGACAGCACATGCTGAAGGATCACAGCAGTGTGACATAT
TGGACCTGCTTTGTATGTGGTGATGGGTCTCAATTTTCTGACAGGGACGC
CTTTGTACAACATACAGAGACCTTTCATGCTGCCACCATTCCACCAGCAC
ATATTGCAGTCCTGGTTGAGTTGTCAAAAAAGACAATGCCCTCAGCAATC
CGACGCTGTTCACTTTGCAATTGGCCAGATGACGACGGAGTCGAAGTGGA
AAAAGAGGCGCTGTTCAATCATATCGCCACGGAGGTCCACTCTTTTTCTC
TCCGAGCATTACCATGGGCGGATAGTAATGGACGAGGGAGTGATGAAATT
ATTTACAACAGCTCCGAAAAGGTCTACGACTGGCTAATCAAGAATGACAT
TCAAGTAAATCCCAGTATAGAACGACCTCCCTGCGAGAAGATGTTATGGT
ATGATGACTATTTCCAGCAAAATGCTTATTTTGATTGCAGCTCAGAAGTG
TCGTCTTCAAATGAGCTTGATCCCGATGGATCGAGGCAAAACGAACTGGA
TGGACTTAGAAAGGCGGATGAGATAGAGTCTCGAGGACAGAAGAGTGAAG
CAAATGCAGAGTCAGGTCTTTCTTCTTCGACGTCTAATACAGAGGAAGAT
GATGGAGAGCAGACCAAGAAGCTCGAGATACCCATGGAGTCTCGCAAGAT
TAAACTCATTGAGAAGAATTCTGACGCTCAGCAAGCATCTTCCAAAGCTT
CGGCCACCACCTCTCGGCAGAAACCGGTAAGAGGTTTCTCACAACTCGCA
TATTTTTTTGCCGAAGGCTCAGAGAAGATAAGCGCGCGTGTTGTCCTTGA
CACAACGTCTGAGGACAGTTTTATGTCTTACCGTATTGCGACTCAGTTAG
GGGTCCCATTTCAACTCGTTTTGCCCAAGGTCTTGGTCCCCTTTCGCAAT
GATGCGGTAAATCAAACGAGCTTCACGACACAATATCAAATTAAGGTGGA
CTGGCATTTTGGACAAAAGGCCAAGAGTTATACCACCAATTTCTTAGTCT
TGGATATGGACGAGTACGATGTAGTTATTGGGAGGAGGGCTATTTCTAGA
TTTGGTTTTATTCGTCGAAGGACGCACTTATCCCCCACCCCGCGTATAGA
ACGGGGGATGGAACAGGAGGCAGAACAGGGGGACTTGCCTGTAAAACCGG
ACAGCTCTCGGTCATTTGTCGAAAAAGTGAGATCGTGGTTTGAAGAGAAA
CCGGGCTGA back to topCoding sequence (CDS) from alignment at ch1:2267673..2270181- >KJC3_000905-T2 ID=KJC3_000905-T2|Name=KJC3_000905-T2|organism=Aspergillus niger KJC3|type=CDS|length=3918bp|location=Sequence derived from alignment at ch1:2267673..2270181- (Aspergillus niger KJC3)
GAAGCATATCGAAGATGATTTGAGCCCATACACCTGTGTTTTGGCTGGTT
GTGATCAACCTTATGTTCTTTATAATACAAAGGATAGTTGGCGACAGCAC
ATGCTGAAGGATCACAGCAGTGTGACATATTGGACCTGCTTTGTATGTGG
TGATGGGTCTCAATTTTCTGACAGGGACGCCTTTGTACAACATACAGAGA
CCTTTCATGCTGCCACCATTCCACCAGCACATATTGCAGTCCTGGTTGAG
TTGTCAAAAAAGACAATGCCCTCAGCAATCCGACGCTGTTCACTTTGCAA
TTGGCCAGATGACGACGGAGTCGAAGTGGAAAAAGAGGCGCTGTTCAATC
ATATCGCCACGGAGGTCCACTCTTTTTCTCTCCGAGCATTACCATGGGCG
GATAGTAATGGACGAGGGAGTGATGAAATTATTTACAACAGCTCCGAAAA
GGTCTACGACTGGCTAATCAAGAATGACATTCAAGTAAATCCCAGTATAG
AACGACCTCCCTGCGAGAAGATGTTATGGTATGATGACTATTTCCAGCAA
AATGCTTATTTTGATTGCAGCTCAGAAGTGTCGTCTTCAAATGAGCTTGA
TCCCGATGGATCGAGGCAAAACGAACTGGATGGACTTAGAAAGGCGGATG
AGATAGAGTCTCGAGGACAGAAGAGTGAAGCAAATGCAGAGTCAGGTCTT
TCTTCTTCGACGTCTAATACAGAGGAAGATGATGGAGAGCAGACCAAGAA
GCTCGAGATACCCATGGAGTCTCGCAAGATTAAACTCATTGAGAAGAATT
CTGACGCTCAGCAAGCATCTTCCAAAGCTTCGGCCACCACCTCTCGGCAG
AAACCGGTAAGAGGTTTCTCACAACTCGCATATTTTTTTGCCGAAGGCTC
AGAGAAGATAAGCGCGCGTGTTGTCCTTGACACAACGTCTGAGGACAGTT
TTATGTCTTACCGTATTGCGACTCAGTTAGGGGTCCCATTTCAACTCGTT
TTGCCCAAGGTCTTGGTCCCCTTTCGCAATGATGCGGTAAATCAAACGAG
CTTCACGACACAATATCAAATTAAGGTGGACTGGCATTTTGGACAAAAGG
CCAAGAGTTATACCACCAATTTCTTAGTCTTGGATATGGACGAGTACGAT
GTAGTTATTGGGAGGAGGGCTATTTCTAGATTTGGTTTTATTCGTCGAAG
GACGCACTTATCCCCCACCCCGCGTATAGAACGGGGGATGGAACAGGAGG
CAGAACAGGGGGACTTGCCTGTAAAACCGGACAGCTCTCGGTCATTTGTC
GAAAAAGTGAGATCGTGGTTTGAAGAGAAACCGGGCTGAATGTATAACAT
CGAGTCGATGCTGGATCAACTTTCCCGGGTCGCGGTTGCCATACGTCGCT
CTGGAAGGCGCTCACGGTGGCAAAAGGCAGACCAACTGTTCAACGCAACA
GAGCACCAGGAGCTGGAGGGCCACCTTGTCGGAATGTTACTCTTTCAACT
GAAGGGTCGTACTCAAGAAAGAGACCCATCAAAGTTGGATGAAGTACAAT
TGCGGCTGGTACACTGTAACCTAAAGCGTCGAAATCGCTTTTTGTATTCT
CAAAAACATGCCATGGGTCTGGATGTTGGCTGCGTACGACATACACCTGT
ATCGAAGCCAGCTGGATCAGCACAGAAGGAGACACCCGAAAGGAAACCTA
GCCCTAAATCCTCGGGTAATAGCCCAGTGCACGCCAATAAAACAATAATT
ACGGGAACCAGTGCCTCCAGATTGTCCGATGGCTTTCAATTACCACATCT
AGACCACGCTATATCCGTCACGTCTTCCGCAGTATCATCTACAGCACTCA
ATATAGATTACCCGCGCCCGCCTCAACTCAAAGATGATGCGCGGCTCTTT
CGGTGTCCCTGTTGCTGCGAAGCACTCCCTGTAACAATGACAGAGAATAT
CAGGTGGAGGAAGCATATCGAAGATGATTTGAGCCCATACACCTGTGTTT
TGGCTGGTTGTGATCAACCTTATGTTCTTTATAATACAAAGGATAGTTGG
CGACAGCACATGCTGAAGGATCACAGCAGTGTGACATATTGGACCTGCTT
TGTATGTGGTGATGGGTCTCAATTTTCTGACAGGGACGCCTTTGTACAAC
ATACAGAGACCTTTCATGCTGCCACCATTCCACCAGCACATATTGCAGTC
CTGGTTGAGTTGTCAAAAAAGACAATGCCCTCAGCAATCCGACGCTGTTC
ACTTTGCAATTGGCCAGATGACGACGGAGTCGAAGTGGAAAAAGAGGCGC
TGTTCAATCATATCGCCACGGAGGTCCACTCTTTTTCTCTCCGAGCATTA
CCATGGGCGGATAGTAATGGACGAGGGAGTGATGAAATTATTTACAACAG
CTCCGAAAAGGTCTACGACTGGCTAATCAAGAATGACATTCAAGTAAATC
CCAGTATAGAACGACCTCCCTGCGAGAAGATGTTATGGTATGATGACTAT
TTCCAGCAAAATGCTTATTTTGATTGCAGCTCAGAAGTGTCGTCTTCAAA
TGAGCTTGATCCCGATGGATCGAGGCAAAACGAACTGGATGGACTTAGAA
AGGCGGATGAGATAGAGTCTCGAGGACAGAAGAGTGAAGCAAATGCAGAG
TCAGGTCTTTCTTCTTCGACGTCTAATACAGAGGAAGATGATGGAGAGCA
GACCAAGAAGCTCGAGATACCCATGGAGTCTCGCAAGATTAAACTCATTG
AGAAGAATTCTGACGCTCAGCAAGCATCTTCCAAAGCTTCGGCCACCACC
TCTCGGCAGAAACCGGTAAGAGGTTTCTCACAACTCGCATATTTTTTTGC
CGAAGGCTCAGAGAAGATAAGCGCGCGTGTTGTCCTTGACACAACGTCTG
AGGACAGTTTTATGTCTTACCGTATTGCGACTCAGTTAGGGGTCCCATTT
CAACTCGTTTTGCCCAAGGTCTTGGTCCCCTTTCGCAATGATGCGGTAAA
TCAAACGAGCTTCACGACACAATATCAAATTAAGGTGGACTGGCATTTTG
GACAAAAGGCCAAGAGTTATACCACCAATTTCTTAGTCTTGGATATGGAC
GAGTACGATGTAGTTATTGGGAGGAGGGCTATTTCTAGATTTGGTTTTAT
TCGTCGAAGGACGCACTTATCCCCCACCCCGCGTATAGAACGGGGGATGG
AACAGGAGGCAGAACAGGGGGACTTGCCTGTAAAACCGGACAGCTCTCGG
TCATTTGTCGAAAAAGTGAGATCGTGGTTTGAAGAGAAACCGGGCTGAAT
GTATAACATCGAGTCGATGCTGGATCAACTTTCCCGGGTCGCGGTTGCCA
TACGTCGCTCTGGAAGGCGCTCACGGTGGCAAAAGGCAGACCAACTGTTC
AACGCAACAGAGCACCAGGAGCTGGAGGGCCACCTTGTCGGAATGTTACT
CTTTCAACTGAAGGGTCGTACTCAAGAAAGAGACCCATCAAAGTTGGATG
AAGTACAATTGCGGCTGGTACACTGTAACCTAAAGCGTCGAAATCGCTTT
TTGTATTCTCAAAAACATGCCATGGGTCTGGATGTTGGCTGCGTACGACA
TACACCTGTATCGAAGCCAGCTGGATCAGCACAGAAGGAGACACCCGAAA
GGAAACCTAGCCCTAAATCCTCGGGTAATAGCCCAGTGCACGCCAATAAA
ACAATAATTACGGGAACCAGTGCCTCCAGATTGTCCGATGGCTTTCAATT
ACCACATCTAGACCACGCTATATCCGTCACGTCTTCCGCAGTATCATCTA
CAGCACTCAATATAGATTACCCGCGCCCGCCTCAACTCAAAGATGATGCG
CGGCTCTTTCGGTGTCCCTGTTGCTGCGAAGCACTCCCTGTAACAATGAC
AGAGAATATCAGGTGGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021109 |
| DBxref | InterPro:IPR013087 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2267673..2270181 - |
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