|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2408867..2410563+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000956-T1 ID=KJC3_000956-T1|Name=KJC3_000956-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1697bp|location=Sequence derived from alignment at ch1:2408867..2410563+ (Aspergillus niger KJC3)
CCCGAGTTGGTCTAGCTTACCGGCTAAAATCTCACATACTATCAACTGAT
AACGATAGCAAAGGCAGGATTGTGATGGCCCCGACGGACTCCGGGATATG
ACAAACACCTGCTGACAGGCCATTTGTCCCAACCCCTCTGGGGTTGATAT
TTGGCAGCTTCCCCAGTTTTTCTGCTCCTATTGACGAAGGCCCTTGTTAC
ATTCATCATCATGGTCCGCCGAATTGCTTCAGCTACACCTATGGTGCAAT
CGCCCATGTCGCCATTGGGCACAACATACTGCGTCCGTCCTAATTCTGTT
TCAATGAATCTTCAAAGAAGACCTCTCGTGATCGCATCAACAGACGAGGC
CAAGGTCACTATAATATATGCCGGACTATTAATCCCTGGCGACGGAGAAC
CTCTGCGCAATGCTGCCCTAGTCATCAGCGATAAGATCATCGCGTTCGTT
GGATCCGAAGCCGACATCCCTAAGAAATACCTCCGGTCCACGCAGTCTAC
TCATCGTGTCCCCGTGCTCATGCCTGGCTTGTGGGATTGCCACATGCATT
TTGGCGGGGATGACGATTATTACAACGATTATACATCTGGTCTGGCCACT
CATCCAGCATCATCAGGTGCTCGACTAGCCCGTGGTTGCTGGGAAGCATT
GCAGAATGGGTATACATCCTACCGCGACCTAGCCGGATACGGGTGCGAGG
TCGCAAAGGCGATCAATGATGGCACTATCGTTGGTCCAAACGTGTACTCG
TCTGGCGCTGCACTCAGTCAGACAGCTGGACATGGCGATATCTTCGCTCT
TCCGGCAGGCGAAGTACTGGGGAGTTATGGAGTAATGAACCCACGCCCTG
GGTACTGGGGGGCAGGGCCGCTATGTATCGCCGATGGCGTAGAGGAGGTC
CGACGAGCAGTGAGGTTGCAGATCCGTCGCGGTGCAAAGGTTATCAAAGT
GATGGCCTCTGGGGGTGTCATGTCGCGAGACGATAATCCCAACTTTGCAC
AGTTCTCTCCAGAAGAACTGAAGGTGATAGTGGAAGAGGCGGCTCGACAG
AACCGGATCGTTTCTGCACATGTGCATGGCAAGGCGGGGATTATGGCTGC
TATCAAAGCAGGCTGCAAGAGTCTGGAGCATGTGTCTTATGCTGACGAGG
AGGTCTGGGAGCTCATGAAAGAGAAGGGAATTTTGTATGTGGCCACGCGC
TCGGTTATTGAAATATTTCTGGCTAGTAATGGAGAGGGGTTGGTGAAAGA
GTCGTGGGCCAAGTTGCAGGCCCTTGCCGATTCGCATTTGAAAGCCTATC
AGGGAGCTATTAAGGCGGGTGTTACCATTGCGTTGGGAACGGATACCGCC
CCCGGTGGTCCTACCGCACTTGAGTTGCAGTTTGCCGTCGAGAGAGGAGG
TATGACGCCGTTGGAGGCCATCAAAGCCGCAACTGCGAACGCTCCCCTGT
CGGTTGGTCCACAAGCACCGTTGACGGGTCAGCTTCGCGAGGGGTATGAG
GCAGATGTGATTGCGTTGGAGGAGAATCCATTGGAGGACATCAAAGTCTT
TCAAGAGCCGAAGGCGGTTACCCACGTCTGGAAGGGAGGGAAACTGTTCA
AAGGTCCAGGTATTGGTCCGTGGGGAGAAGATGCACGTAATCCTTTTCTG
TAGTTTAAAATATGATTCAATGGCTATTTCACGTTTTCAGACTCTGG back to topCoding sequence (CDS) from alignment at ch1:2408867..2410563+ >KJC3_000956-T1 ID=KJC3_000956-T1|Name=KJC3_000956-T1|organism=Aspergillus niger KJC3|type=CDS|length=1443bp|location=Sequence derived from alignment at ch1:2408867..2410563+ (Aspergillus niger KJC3)
ATGGTCCGCCGAATTGCTTCAGCTACACCTATGGTGCAATCGCCCATGTC
GCCATTGGGCACAACATACTGCGTCCGTCCTAATTCTGTTTCAATGAATC
TTCAAAGAAGACCTCTCGTGATCGCATCAACAGACGAGGCCAAGGTCACT
ATAATATATGCCGGACTATTAATCCCTGGCGACGGAGAACCTCTGCGCAA
TGCTGCCCTAGTCATCAGCGATAAGATCATCGCGTTCGTTGGATCCGAAG
CCGACATCCCTAAGAAATACCTCCGGTCCACGCAGTCTACTCATCGTGTC
CCCGTGCTCATGCCTGGCTTGTGGGATTGCCACATGCATTTTGGCGGGGA
TGACGATTATTACAACGATTATACATCTGGTCTGGCCACTCATCCAGCAT
CATCAGGTGCTCGACTAGCCCGTGGTTGCTGGGAAGCATTGCAGAATGGG
TATACATCCTACCGCGACCTAGCCGGATACGGGTGCGAGGTCGCAAAGGC
GATCAATGATGGCACTATCGTTGGTCCAAACGTGTACTCGTCTGGCGCTG
CACTCAGTCAGACAGCTGGACATGGCGATATCTTCGCTCTTCCGGCAGGC
GAAGTACTGGGGAGTTATGGAGTAATGAACCCACGCCCTGGGTACTGGGG
GGCAGGGCCGCTATGTATCGCCGATGGCGTAGAGGAGGTCCGACGAGCAG
TGAGGTTGCAGATCCGTCGCGGTGCAAAGGTTATCAAAGTGATGGCCTCT
GGGGGTGTCATGTCGCGAGACGATAATCCCAACTTTGCACAGTTCTCTCC
AGAAGAACTGAAGGTGATAGTGGAAGAGGCGGCTCGACAGAACCGGATCG
TTTCTGCACATGTGCATGGCAAGGCGGGGATTATGGCTGCTATCAAAGCA
GGCTGCAAGAGTCTGGAGCATGTGTCTTATGCTGACGAGGAGGTCTGGGA
GCTCATGAAAGAGAAGGGAATTTTGTATGTGGCCACGCGCTCGGTTATTG
AAATATTTCTGGCTAGTAATGGAGAGGGGTTGGTGAAAGAGTCGTGGGCC
AAGTTGCAGGCCCTTGCCGATTCGCATTTGAAAGCCTATCAGGGAGCTAT
TAAGGCGGGTGTTACCATTGCGTTGGGAACGGATACCGCCCCCGGTGGTC
CTACCGCACTTGAGTTGCAGTTTGCCGTCGAGAGAGGAGGTATGACGCCG
TTGGAGGCCATCAAAGCCGCAACTGCGAACGCTCCCCTGTCGGTTGGTCC
ACAAGCACCGTTGACGGGTCAGCTTCGCGAGGGGTATGAGGCAGATGTGA
TTGCGTTGGAGGAGAATCCATTGGAGGACATCAAAGTCTTTCAAGAGCCG
AAGGCGGTTACCCACGTCTGGAAGGGAGGGAAACTGTTCAAAGGTCCAGG
TATTGGTCCGTGGGGAGAAGATGCACGTAATCCTTTTCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000956-T1.utr5p1 | KJC3_000956-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000956-T1.utr3p1 | KJC3_000956-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.12 |
| Note | MEROPS:MER0005900 |
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR011059 |
| DBxref | InterPro:IPR006680 |
| DBxref | PFAM:PF01979 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2408867..2410563 + |
|
