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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2431863..2433111- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000963-T1 ID=KJC3_000963-T1|Name=KJC3_000963-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1249bp|location=Sequence derived from alignment at ch1:2431863..2433111- (Aspergillus niger KJC3)
GCCAGTGCAGTCCAGTCCACTCTTTCATTCTCACCCCTTCTTTACTATCT
TACAATAATTTCTATTCAATAAGTCTGCAGTGCAGCACCCACACACATTC
ATTCTCTGAGAGATAAAAAATAACAAAATGGCCCCCCTCAAATCCCTCCT
CCTCGGCGCCTCCCTGGCCACCCTCGCCCTTTCCACCCCACTGGCAACCG
ACGCCGAAAACCTCTACGCACGTCAATTCGGCACGGGCTCTACAGCCAAC
GAACTCGAGCAGGGAAGCTGCAAGGATGTGACTCTCATCTTTGCGAGGGG
GTCAACTGAGCTTGGGAATATGGTATGCTTGTTGCCTGCCTTTACCCGTA
CTATACTATCCCAGAACATACCAAGCACAACATCACAAAACATGTGGAGC
CAGGAGCTAATCAGTGGTGGTGATGATATGATGTAGGGCACCGTAATCGG
CCCCCCTCTCTGCGACAACCTGAAATCCAAACTCGGATCCGACAAAGTCG
CCTGCCAGGGTGTCGGCGGCCAATACAGCGCCGGACTCGTGCAGAATGCC
CTGCCCCAGAACACCGATCCGGGGAGTATCTCCGCCGCGAAGCAGATGTT
CGAGGAGGCGAATTCGAAGTGTCCCAATACTAAGATTGTTGCGGGTGGTT
ATAGGTATATATCCCTTTCCCCTTTACCTTCCCCCATATCAATGCTAGAG
GCAAAGGAATATCATGCTAATGTAGATGTTGGGGAAACAGTCAAGGAAGC
GCTGTGATTGACAACGCCGTGCAAGAACTCAGCACCACCGTGAAAGACCA
AGTGAAGGGTGTCGTGCTCTTCGGGTTCACGAGAAACGTGCAGGATCACG
GGCAGATCCCTAATTACCCTAAGGATGACGTGAAGGTTTATTGTGCCGTG
GGCGATCTGGTCTGTGATGATACGTTGGTTGTTACGGCGATGCATCTGAC
GTATGGGATGGATGCGGGTGATGCGGCGAGCTTTTTGGCCGAGAAGGTGC
AGTCTTCCAGTAGTTCGACTACTAGCTCCAGCTCGGATGCCGCGAGTAGT
TCATCTGCTGCGGGGACGTCGTCGTCGGGGTTGTCGGGACTGTCTTCTTT
TTTTGGAGGTCTCTAAATAGAATTAGATGAGATGAGTGGTCCGGGTGGGG
GTTTAGGGGATTGTTGTTCGTTTCTCTTGGATGATTTAGTTTCCGTTATT
TACTTAGCTGGGATAAGATATATGGTACATAGTATAGATGTGTTGTGAT back to topCoding sequence (CDS) from alignment at ch1:2431863..2433111- >KJC3_000963-T1 ID=KJC3_000963-T1|Name=KJC3_000963-T1|organism=Aspergillus niger KJC3|type=CDS|length=2367bp|location=Sequence derived from alignment at ch1:2431863..2433111- (Aspergillus niger KJC3)
TCAAGGAAGCGCTGTGATTGACAACGCCGTGCAAGAACTCAGCACCACCG
TGAAAGACCAAGTGAAGGGTGTCGTGCTCTTCGGGTTCACGAGAAACGTG
CAGGATCACGGGCAGATCCCTAATTACCCTAAGGATGACGTGAAGGTTTA
TTGTGCCGTGGGCGATCTGGTCTGTGATGATACGTTGGTTGTTACGGCGA
TGCATCTGACGTATGGGATGGATGCGGGTGATGCGGCGAGCTTTTTGGCC
GAGAAGGTGCAGTCTTCCAGTAGTTCGACTACTAGCTCCAGCTCGGATGC
CGCGAGTAGTTCATCTGCTGCGGGGACGTCGTCGTCGGGGTTGTCGGGAC
TGTCTTCTTTTTTTGGAGGTCTCTAAGGCACCGTAATCGGCCCCCCTCTC
TGCGACAACCTGAAATCCAAACTCGGATCCGACAAAGTCGCCTGCCAGGG
TGTCGGCGGCCAATACAGCGCCGGACTCGTGCAGAATGCCCTGCCCCAGA
ACACCGATCCGGGGAGTATCTCCGCCGCGAAGCAGATGTTCGAGGAGGCG
AATTCGAAGTGTCCCAATACTAAGATTGTTGCGGGTGGTTATAGATGGCC
CCCCTCAAATCCCTCCTCCTCGGCGCCTCCCTGGCCACCCTCGCCCTTTC
CACCCCACTGGCAACCGACGCCGAAAACCTCTACGCACGTCAATTCGGCA
CGGGCTCTACAGCCAACGAACTCGAGCAGGGAAGCTGCAAGGATGTGACT
CTCATCTTTGCGAGGGGGTCAACTGAGCTTGGGAATATGTCAAGGAAGCG
CTGTGATTGACAACGCCGTGCAAGAACTCAGCACCACCGTGAAAGACCAA
GTGAAGGGTGTCGTGCTCTTCGGGTTCACGAGAAACGTGCAGGATCACGG
GCAGATCCCTAATTACCCTAAGGATGACGTGAAGGTTTATTGTGCCGTGG
GCGATCTGGTCTGTGATGATACGTTGGTTGTTACGGCGATGCATCTGACG
TATGGGATGGATGCGGGTGATGCGGCGAGCTTTTTGGCCGAGAAGGTGCA
GTCTTCCAGTAGTTCGACTACTAGCTCCAGCTCGGATGCCGCGAGTAGTT
CATCTGCTGCGGGGACGTCGTCGTCGGGGTTGTCGGGACTGTCTTCTTTT
TTTGGAGGTCTCTAAGGCACCGTAATCGGCCCCCCTCTCTGCGACAACCT
GAAATCCAAACTCGGATCCGACAAAGTCGCCTGCCAGGGTGTCGGCGGCC
AATACAGCGCCGGACTCGTGCAGAATGCCCTGCCCCAGAACACCGATCCG
GGGAGTATCTCCGCCGCGAAGCAGATGTTCGAGGAGGCGAATTCGAAGTG
TCCCAATACTAAGATTGTTGCGGGTGGTTATAGATGGCCCCCCTCAAATC
CCTCCTCCTCGGCGCCTCCCTGGCCACCCTCGCCCTTTCCACCCCACTGG
CAACCGACGCCGAAAACCTCTACGCACGTCAATTCGGCACGGGCTCTACA
GCCAACGAACTCGAGCAGGGAAGCTGCAAGGATGTGACTCTCATCTTTGC
GAGGGGGTCAACTGAGCTTGGGAATATGTCAAGGAAGCGCTGTGATTGAC
AACGCCGTGCAAGAACTCAGCACCACCGTGAAAGACCAAGTGAAGGGTGT
CGTGCTCTTCGGGTTCACGAGAAACGTGCAGGATCACGGGCAGATCCCTA
ATTACCCTAAGGATGACGTGAAGGTTTATTGTGCCGTGGGCGATCTGGTC
TGTGATGATACGTTGGTTGTTACGGCGATGCATCTGACGTATGGGATGGA
TGCGGGTGATGCGGCGAGCTTTTTGGCCGAGAAGGTGCAGTCTTCCAGTA
GTTCGACTACTAGCTCCAGCTCGGATGCCGCGAGTAGTTCATCTGCTGCG
GGGACGTCGTCGTCGGGGTTGTCGGGACTGTCTTCTTTTTTTGGAGGTCT
CTAAGGCACCGTAATCGGCCCCCCTCTCTGCGACAACCTGAAATCCAAAC
TCGGATCCGACAAAGTCGCCTGCCAGGGTGTCGGCGGCCAATACAGCGCC
GGACTCGTGCAGAATGCCCTGCCCCAGAACACCGATCCGGGGAGTATCTC
CGCCGCGAAGCAGATGTTCGAGGAGGCGAATTCGAAGTGTCCCAATACTA
AGATTGTTGCGGGTGGTTATAGATGGCCCCCCTCAAATCCCTCCTCCTCG
GCGCCTCCCTGGCCACCCTCGCCCTTTCCACCCCACTGGCAACCGACGCC
GAAAACCTCTACGCACGTCAATTCGGCACGGGCTCTACAGCCAACGAACT
CGAGCAGGGAAGCTGCAAGGATGTGACTCTCATCTTTGCGAGGGGGTCAA
CTGAGCTTGGGAATATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
| GO:0050525 | cutinase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000963-T1.utr3p1 | KJC3_000963-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000963-T1.utr5p1 | KJC3_000963-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:CE5 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000675 |
| DBxref | InterPro:IPR011150 |
| DBxref | PFAM:PF01083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2431863..2433111 - |
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