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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2447803..2449354+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000970-T1 ID=KJC3_000970-T1|Name=KJC3_000970-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1552bp|location=Sequence derived from alignment at ch1:2447803..2449354+ (Aspergillus niger KJC3)
CACGTTAAGCTGCTTCAATCACCTGAACCTGAATGCCAACAACAACAACC
ACCACTACCATGGAATAACCTCATACTATTCTTCTCTCCTCCTCTCTCCT
CTCCTCCTATTCTTCCTCTCTCTCTCCTCAAAAACAAGAAAATTCATTCC
ACCATGTCCTCGCCCTTCCATCGCCGTCCTTTCCCCGACTACTTCCTCTC
ATCCCCTCTAGCAACTCTCATCTACCCTCTCCATCAACTCCTCAACCACC
TCCGCGGCCCTCCTCACCTCCCACCCCCGAACGCCCGTCCCATCCGCGTC
GTCTGCATCTCCGACACCCACACTCTCGAATACCCCGACGTTCCCGATGG
CGACCTCCTCATCCACGCCGGCGACCTCTGCAACGATGGCAGCGCCCGCG
AAATCCAAGCCGCCGTGAACTGGCTGCGCAGTCTCCCTCACCCACATAAA
GTCGTCATCTGCGGCAACCACGACAGCTACTTCGACACGCGATCGCGTCT
CCCCGAAGACCGCATCGATGCCTCCTCATCTCACAACAACACTTCGTCCA
CATATGCAACCATCTCTTCTTCAACCGCCTCCCTCCGCTCCCTAGACGAT
TACTTAACCGACGACCCTCACCCCCGCATCGACTGGGGCGACGACATCCA
CTACCTCCAACACTCCTCCATCACCCTGACCTTCCCACCCACCACCGCAT
CCTCCTCCTCATCAAGCATCACCAGCACCACCCCCCTCCGCCCCCGCACC
CTAACCATCTACGGCGCGCCCCAAATCCCCGCCATCGTGCCCTTCGGCCC
CGAACACGCCTTCACCTACCCCCCACACCACGACGCCTGGTCCAACACCA
TCCCCGCCTCCACCGACATCCTCGTCACCCATACACCCCCGCAATCCCGC
CTCGACCTCTCCCCTGTCTACTCAGCAGGCTGCCCATTCCTCCTCTCCGA
ACTATGGCGCGTGCGCCCGGCCCTGCACGTCTTCGGCCACGTCCACGCAG
CGTACGGCATCGAGCGCGTCTTCTACGATGAGGCCCAGCGCGCGTGGGAA
CGACTCTGCGCGTCGAGGAAATCCCGTGCCCGTCTGTCGAGGTTCAGCTC
CCTGTTTGGGTTCTTGCGAGATCTGTTTGATCTCTCCGGCTTGGTGGATT
CGGCGAGGGTCGTGCTGTATGGTGTTTTGGGGGTCGTTTGGGCCAGGGTC
TGGGGTGGGGAGAATAGGGATGCCGGGTGGGTGGTTAATGCCGCTTGTAT
GTATAGGGATTCGGGTGAGTTGAGGAATAAGCCCAGGGTTGTGGTTTTGT
AGGTTGATCACTAATCAAGTGATTTGGTTTGTGGGGGTTGGTAATGGATG
GTAGTTTTCCATGTCATTTTCCTTGTATATAAGGGAGAGCCTAGAAGGGG
AAAAGGTATGTGGTTGCAGGGTGTATTGTAAATAATTGCCGGGGTCAAGC
TCAGGAGACTAAGAGAATCATTCCCAAGCTGCTCGTTTCATAAATACTAA
TGTCCTACATAACTTCCATATCTAAATCAAAAATATACAGTCTTGTTTAT
CG back to topCoding sequence (CDS) from alignment at ch1:2447803..2449354+ >KJC3_000970-T1 ID=KJC3_000970-T1|Name=KJC3_000970-T1|organism=Aspergillus niger KJC3|type=CDS|length=1149bp|location=Sequence derived from alignment at ch1:2447803..2449354+ (Aspergillus niger KJC3)
ATGTCCTCGCCCTTCCATCGCCGTCCTTTCCCCGACTACTTCCTCTCATC
CCCTCTAGCAACTCTCATCTACCCTCTCCATCAACTCCTCAACCACCTCC
GCGGCCCTCCTCACCTCCCACCCCCGAACGCCCGTCCCATCCGCGTCGTC
TGCATCTCCGACACCCACACTCTCGAATACCCCGACGTTCCCGATGGCGA
CCTCCTCATCCACGCCGGCGACCTCTGCAACGATGGCAGCGCCCGCGAAA
TCCAAGCCGCCGTGAACTGGCTGCGCAGTCTCCCTCACCCACATAAAGTC
GTCATCTGCGGCAACCACGACAGCTACTTCGACACGCGATCGCGTCTCCC
CGAAGACCGCATCGATGCCTCCTCATCTCACAACAACACTTCGTCCACAT
ATGCAACCATCTCTTCTTCAACCGCCTCCCTCCGCTCCCTAGACGATTAC
TTAACCGACGACCCTCACCCCCGCATCGACTGGGGCGACGACATCCACTA
CCTCCAACACTCCTCCATCACCCTGACCTTCCCACCCACCACCGCATCCT
CCTCCTCATCAAGCATCACCAGCACCACCCCCCTCCGCCCCCGCACCCTA
ACCATCTACGGCGCGCCCCAAATCCCCGCCATCGTGCCCTTCGGCCCCGA
ACACGCCTTCACCTACCCCCCACACCACGACGCCTGGTCCAACACCATCC
CCGCCTCCACCGACATCCTCGTCACCCATACACCCCCGCAATCCCGCCTC
GACCTCTCCCCTGTCTACTCAGCAGGCTGCCCATTCCTCCTCTCCGAACT
ATGGCGCGTGCGCCCGGCCCTGCACGTCTTCGGCCACGTCCACGCAGCGT
ACGGCATCGAGCGCGTCTTCTACGATGAGGCCCAGCGCGCGTGGGAACGA
CTCTGCGCGTCGAGGAAATCCCGTGCCCGTCTGTCGAGGTTCAGCTCCCT
GTTTGGGTTCTTGCGAGATCTGTTTGATCTCTCCGGCTTGGTGGATTCGG
CGAGGGTCGTGCTGTATGGTGTTTTGGGGGTCGTTTGGGCCAGGGTCTGG
GGTGGGGAGAATAGGGATGCCGGGTGGGTGGTTAATGCCGCTTGTATGTA
TAGGGATTCGGGTGAGTTGAGGAATAAGCCCAGGGTTGTGGTTTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000970-T1.utr5p1 | KJC3_000970-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000970-T1.utr3p1 | KJC3_000970-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029052 |
| DBxref | InterPro:IPR004843 |
| DBxref | PFAM:PF00149 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2447803..2449354 + |
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