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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2600149..2602162- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001028-T1 ID=KJC3_001028-T1|Name=KJC3_001028-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2014bp|location=Sequence derived from alignment at ch1:2600149..2602162- (Aspergillus niger KJC3)
GCCATCCCTGGCATCAGACTATCAGACTATCAGACCTGCTCATCCTTCCT
CTCATTGGAGTGAAAATGCAGCCACGGAGCAGCCACTCGTGCCCTAGTCA
GACTCTATCTCCCGCATGACCGATATAAGGGTGTCCGGGTCCCCCAGCCG
GGGTTGACCCTCTCCAACCCTGGCAATTCTGGCAGGCAACATGTCCATGG
AGAATATTAGCTCGACGCCCGCAGGCGGGCCTGATCCTAAGGGAGCTTCC
ACTGCTGTGGAGGATCACAAGCCGCCGCAGGATGTGTCCCATGTCGAGCG
GGCGCTGTCACCCTCCGACAAACTGAAGGCCCCGATCGATGCGAACCGCG
TCGACAATGAGGTGCTGGAGTATGCCGCGCGCGGCCAGATTGAGGTCGAT
GAAGCCGAAAGTCGGCGTCTTCGTCGCATGATTGATCGTCGTGTGCTGGT
CATCATGATCGTGACATACTTTCTGCAGGCCCTGGACAAGGGTACCATGT
CGTTTGCTTCCATTATGGGTATTCGCGACGATGCCCATCTTGTGGGACAA
CAGGTGAGTCTGAACATATATCCGCTTATGGTCAAGCACTAATTAAGTAG
TACTCCTGGCTCACAACCTGTATCTACATTGCCGTACTCATTGTCGAATA
TCCCACCAACTGGATCATCCAACGCGTCCGCATCGCCAAATACCTCGGCT
TCAACATCATCTGCTGGGGTACCATCCTAGCCCTACACTCAGCATGCCAC
AACTTTGCCGGTCTAGTGACCGTGCGCACTCTGCTTGGTATCTTCGAAGC
CGCATGCCAACCCTCCTTCGTTGTCCTTTCCGGAATGTGGTATAAGCGTG
AAGAACAAGCTGCTACCGTCACCTTCTGGTACAGTCCAGTCTCTACACCC
TTGATCTACGTATACTAACAAGACATAGGTATATGATGAACGGCGGCCAA
CAAATTGTCGGCGGCCTCCTAGCCTACTGTTTCAGTCTAATTGGGTCTGA
TCGCGCGCTTAAATCCTGGCAAGCACTTTTCCTCACGTACGGCTGCATTT
CCGTGCTCTGGGGGCTGTTTGTGGTCTGGTGGATGCCCGATTCCCCGATG
CGTGCCAAATGCTTCACCGAAGAGGACAAGCACAAGATGGTTGAGCGTGT
GCGTGCCAACCAGACTGGACTCCAGAATAAGAAGTTCCGCGCGTATCAGA
TGTGGGAAGCGTTCCGGGATCCGCAGATGTACTGCTACTGCGCGATTCAG
ATCTTTACCACGCTGCCCACGAGTGGACTGGGGGCGTTTGCGAATATCAT
CATTAGTGGGTTCAACTTTACGGAGTTGCAGACGCAGTTGTTGGCGATGG
TACTGGGCTTTTACATCATTATTGTATTGTTGACGAGTGCGTGGCTGGTC
AAGAAGTTTGAGCAGAACTTGCTGGTGATGTTGGGATTTATTATTCCGTG
CGTCCCCCCTTCTTCTCGTATCTTATTCTGAGGTGAGAGGCTAACAAGAT
GTAGATCATTTGTCGGAACCATCGTCCTCATGACAGTGCAGAATCACTCC
CTCAGCACCAAAGTGGGTCTTCTTATCAGCTACTACATCACGCTGTCGTT
CTGGTCTGCCCAGAACTTGGGCTTGTCCATGGTGACGAGGAACATTGCCG
GCGCTACTAAGAAGTCCACTGTTGTGGCTGCGACGTTTGTGTCTTGGGCT
GTTGGAAACGCCATCGGTAGGACCCTACATTAAATGTTTGTCTTTCTCAG
AGTCATACTAATGAAGTAGGCCCCCAAGTGTTCCTCGACCGCGACGCCCC
GCGGTACTTCATCGCCTTTGGTGTGCACCTCGGCTGCTACTCAGCCATGA
CACTGGCGGTGATCTTCCTCCGCTTCTACCTGATCCGGGAGAACAAGAAG
AAGGACAAAGCGATGGCAGAGATGGGGATTGCACTGGATGGAGAGGACCA
CCTAGCGAGGGCATTCGAGGACCGAACAGACCGCGAGAATATCCACTTTA
GGTATATTTACTAG back to topCoding sequence (CDS) from alignment at ch1:2600149..2602162- >KJC3_001028-T1 ID=KJC3_001028-T1|Name=KJC3_001028-T1|organism=Aspergillus niger KJC3|type=CDS|length=8085bp|location=Sequence derived from alignment at ch1:2600149..2602162- (Aspergillus niger KJC3)
GCCCCCAAGTGTTCCTCGACCGCGACGCCCCGCGGTACTTCATCGCCTTT
GGTGTGCACCTCGGCTGCTACTCAGCCATGACACTGGCGGTGATCTTCCT
CCGCTTCTACCTGATCCGGGAGAACAAGAAGAAGGACAAAGCGATGGCAG
AGATGGGGATTGCACTGGATGGAGAGGACCACCTAGCGAGGGCATTCGAG
GACCGAACAGACCGCGAGAATATCCACTTTAGGTATATTTACTAGATCAT
TTGTCGGAACCATCGTCCTCATGACAGTGCAGAATCACTCCCTCAGCACC
AAAGTGGGTCTTCTTATCAGCTACTACATCACGCTGTCGTTCTGGTCTGC
CCAGAACTTGGGCTTGTCCATGGTGACGAGGAACATTGCCGGCGCTACTA
AGAAGTCCACTGTTGTGGCTGCGACGTTTGTGTCTTGGGCTGTTGGAAAC
GCCATCGGTATATGATGAACGGCGGCCAACAAATTGTCGGCGGCCTCCTA
GCCTACTGTTTCAGTCTAATTGGGTCTGATCGCGCGCTTAAATCCTGGCA
AGCACTTTTCCTCACGTACGGCTGCATTTCCGTGCTCTGGGGGCTGTTTG
TGGTCTGGTGGATGCCCGATTCCCCGATGCGTGCCAAATGCTTCACCGAA
GAGGACAAGCACAAGATGGTTGAGCGTGTGCGTGCCAACCAGACTGGACT
CCAGAATAAGAAGTTCCGCGCGTATCAGATGTGGGAAGCGTTCCGGGATC
CGCAGATGTACTGCTACTGCGCGATTCAGATCTTTACCACGCTGCCCACG
AGTGGACTGGGGGCGTTTGCGAATATCATCATTAGTGGGTTCAACTTTAC
GGAGTTGCAGACGCAGTTGTTGGCGATGGTACTGGGCTTTTACATCATTA
TTGTATTGTTGACGAGTGCGTGGCTGGTCAAGAAGTTTGAGCAGAACTTG
CTGGTGATGTTGGGATTTATTATTCCTACTCCTGGCTCACAACCTGTATC
TACATTGCCGTACTCATTGTCGAATATCCCACCAACTGGATCATCCAACG
CGTCCGCATCGCCAAATACCTCGGCTTCAACATCATCTGCTGGGGTACCA
TCCTAGCCCTACACTCAGCATGCCACAACTTTGCCGGTCTAGTGACCGTG
CGCACTCTGCTTGGTATCTTCGAAGCCGCATGCCAACCCTCCTTCGTTGT
CCTTTCCGGAATGTGGTATAAGCGTGAAGAACAAGCTGCTACCGTCACCT
TCTGATGTCCATGGAGAATATTAGCTCGACGCCCGCAGGCGGGCCTGATC
CTAAGGGAGCTTCCACTGCTGTGGAGGATCACAAGCCGCCGCAGGATGTG
TCCCATGTCGAGCGGGCGCTGTCACCCTCCGACAAACTGAAGGCCCCGAT
CGATGCGAACCGCGTCGACAATGAGGTGCTGGAGTATGCCGCGCGCGGCC
AGATTGAGGTCGATGAAGCCGAAAGTCGGCGTCTTCGTCGCATGATTGAT
CGTCGTGTGCTGGTCATCATGATCGTGACATACTTTCTGCAGGCCCTGGA
CAAGGGTACCATGTCGTTTGCTTCCATTATGGGTATTCGCGACGATGCCC
ATCTTGTGGGACAACAGGCCCCCAAGTGTTCCTCGACCGCGACGCCCCGC
GGTACTTCATCGCCTTTGGTGTGCACCTCGGCTGCTACTCAGCCATGACA
CTGGCGGTGATCTTCCTCCGCTTCTACCTGATCCGGGAGAACAAGAAGAA
GGACAAAGCGATGGCAGAGATGGGGATTGCACTGGATGGAGAGGACCACC
TAGCGAGGGCATTCGAGGACCGAACAGACCGCGAGAATATCCACTTTAGG
TATATTTACTAGATCATTTGTCGGAACCATCGTCCTCATGACAGTGCAGA
ATCACTCCCTCAGCACCAAAGTGGGTCTTCTTATCAGCTACTACATCACG
CTGTCGTTCTGGTCTGCCCAGAACTTGGGCTTGTCCATGGTGACGAGGAA
CATTGCCGGCGCTACTAAGAAGTCCACTGTTGTGGCTGCGACGTTTGTGT
CTTGGGCTGTTGGAAACGCCATCGGTATATGATGAACGGCGGCCAACAAA
TTGTCGGCGGCCTCCTAGCCTACTGTTTCAGTCTAATTGGGTCTGATCGC
GCGCTTAAATCCTGGCAAGCACTTTTCCTCACGTACGGCTGCATTTCCGT
GCTCTGGGGGCTGTTTGTGGTCTGGTGGATGCCCGATTCCCCGATGCGTG
CCAAATGCTTCACCGAAGAGGACAAGCACAAGATGGTTGAGCGTGTGCGT
GCCAACCAGACTGGACTCCAGAATAAGAAGTTCCGCGCGTATCAGATGTG
GGAAGCGTTCCGGGATCCGCAGATGTACTGCTACTGCGCGATTCAGATCT
TTACCACGCTGCCCACGAGTGGACTGGGGGCGTTTGCGAATATCATCATT
AGTGGGTTCAACTTTACGGAGTTGCAGACGCAGTTGTTGGCGATGGTACT
GGGCTTTTACATCATTATTGTATTGTTGACGAGTGCGTGGCTGGTCAAGA
AGTTTGAGCAGAACTTGCTGGTGATGTTGGGATTTATTATTCCTACTCCT
GGCTCACAACCTGTATCTACATTGCCGTACTCATTGTCGAATATCCCACC
AACTGGATCATCCAACGCGTCCGCATCGCCAAATACCTCGGCTTCAACAT
CATCTGCTGGGGTACCATCCTAGCCCTACACTCAGCATGCCACAACTTTG
CCGGTCTAGTGACCGTGCGCACTCTGCTTGGTATCTTCGAAGCCGCATGC
CAACCCTCCTTCGTTGTCCTTTCCGGAATGTGGTATAAGCGTGAAGAACA
AGCTGCTACCGTCACCTTCTGATGTCCATGGAGAATATTAGCTCGACGCC
CGCAGGCGGGCCTGATCCTAAGGGAGCTTCCACTGCTGTGGAGGATCACA
AGCCGCCGCAGGATGTGTCCCATGTCGAGCGGGCGCTGTCACCCTCCGAC
AAACTGAAGGCCCCGATCGATGCGAACCGCGTCGACAATGAGGTGCTGGA
GTATGCCGCGCGCGGCCAGATTGAGGTCGATGAAGCCGAAAGTCGGCGTC
TTCGTCGCATGATTGATCGTCGTGTGCTGGTCATCATGATCGTGACATAC
TTTCTGCAGGCCCTGGACAAGGGTACCATGTCGTTTGCTTCCATTATGGG
TATTCGCGACGATGCCCATCTTGTGGGACAACAGGCCCCCAAGTGTTCCT
CGACCGCGACGCCCCGCGGTACTTCATCGCCTTTGGTGTGCACCTCGGCT
GCTACTCAGCCATGACACTGGCGGTGATCTTCCTCCGCTTCTACCTGATC
CGGGAGAACAAGAAGAAGGACAAAGCGATGGCAGAGATGGGGATTGCACT
GGATGGAGAGGACCACCTAGCGAGGGCATTCGAGGACCGAACAGACCGCG
AGAATATCCACTTTAGGTATATTTACTAGATCATTTGTCGGAACCATCGT
CCTCATGACAGTGCAGAATCACTCCCTCAGCACCAAAGTGGGTCTTCTTA
TCAGCTACTACATCACGCTGTCGTTCTGGTCTGCCCAGAACTTGGGCTTG
TCCATGGTGACGAGGAACATTGCCGGCGCTACTAAGAAGTCCACTGTTGT
GGCTGCGACGTTTGTGTCTTGGGCTGTTGGAAACGCCATCGGTATATGAT
GAACGGCGGCCAACAAATTGTCGGCGGCCTCCTAGCCTACTGTTTCAGTC
TAATTGGGTCTGATCGCGCGCTTAAATCCTGGCAAGCACTTTTCCTCACG
TACGGCTGCATTTCCGTGCTCTGGGGGCTGTTTGTGGTCTGGTGGATGCC
CGATTCCCCGATGCGTGCCAAATGCTTCACCGAAGAGGACAAGCACAAGA
TGGTTGAGCGTGTGCGTGCCAACCAGACTGGACTCCAGAATAAGAAGTTC
CGCGCGTATCAGATGTGGGAAGCGTTCCGGGATCCGCAGATGTACTGCTA
CTGCGCGATTCAGATCTTTACCACGCTGCCCACGAGTGGACTGGGGGCGT
TTGCGAATATCATCATTAGTGGGTTCAACTTTACGGAGTTGCAGACGCAG
TTGTTGGCGATGGTACTGGGCTTTTACATCATTATTGTATTGTTGACGAG
TGCGTGGCTGGTCAAGAAGTTTGAGCAGAACTTGCTGGTGATGTTGGGAT
TTATTATTCCTACTCCTGGCTCACAACCTGTATCTACATTGCCGTACTCA
TTGTCGAATATCCCACCAACTGGATCATCCAACGCGTCCGCATCGCCAAA
TACCTCGGCTTCAACATCATCTGCTGGGGTACCATCCTAGCCCTACACTC
AGCATGCCACAACTTTGCCGGTCTAGTGACCGTGCGCACTCTGCTTGGTA
TCTTCGAAGCCGCATGCCAACCCTCCTTCGTTGTCCTTTCCGGAATGTGG
TATAAGCGTGAAGAACAAGCTGCTACCGTCACCTTCTGATGTCCATGGAG
AATATTAGCTCGACGCCCGCAGGCGGGCCTGATCCTAAGGGAGCTTCCAC
TGCTGTGGAGGATCACAAGCCGCCGCAGGATGTGTCCCATGTCGAGCGGG
CGCTGTCACCCTCCGACAAACTGAAGGCCCCGATCGATGCGAACCGCGTC
GACAATGAGGTGCTGGAGTATGCCGCGCGCGGCCAGATTGAGGTCGATGA
AGCCGAAAGTCGGCGTCTTCGTCGCATGATTGATCGTCGTGTGCTGGTCA
TCATGATCGTGACATACTTTCTGCAGGCCCTGGACAAGGGTACCATGTCG
TTTGCTTCCATTATGGGTATTCGCGACGATGCCCATCTTGTGGGACAACA
GGCCCCCAAGTGTTCCTCGACCGCGACGCCCCGCGGTACTTCATCGCCTT
TGGTGTGCACCTCGGCTGCTACTCAGCCATGACACTGGCGGTGATCTTCC
TCCGCTTCTACCTGATCCGGGAGAACAAGAAGAAGGACAAAGCGATGGCA
GAGATGGGGATTGCACTGGATGGAGAGGACCACCTAGCGAGGGCATTCGA
GGACCGAACAGACCGCGAGAATATCCACTTTAGGTATATTTACTAGATCA
TTTGTCGGAACCATCGTCCTCATGACAGTGCAGAATCACTCCCTCAGCAC
CAAAGTGGGTCTTCTTATCAGCTACTACATCACGCTGTCGTTCTGGTCTG
CCCAGAACTTGGGCTTGTCCATGGTGACGAGGAACATTGCCGGCGCTACT
AAGAAGTCCACTGTTGTGGCTGCGACGTTTGTGTCTTGGGCTGTTGGAAA
CGCCATCGGTATATGATGAACGGCGGCCAACAAATTGTCGGCGGCCTCCT
AGCCTACTGTTTCAGTCTAATTGGGTCTGATCGCGCGCTTAAATCCTGGC
AAGCACTTTTCCTCACGTACGGCTGCATTTCCGTGCTCTGGGGGCTGTTT
GTGGTCTGGTGGATGCCCGATTCCCCGATGCGTGCCAAATGCTTCACCGA
AGAGGACAAGCACAAGATGGTTGAGCGTGTGCGTGCCAACCAGACTGGAC
TCCAGAATAAGAAGTTCCGCGCGTATCAGATGTGGGAAGCGTTCCGGGAT
CCGCAGATGTACTGCTACTGCGCGATTCAGATCTTTACCACGCTGCCCAC
GAGTGGACTGGGGGCGTTTGCGAATATCATCATTAGTGGGTTCAACTTTA
CGGAGTTGCAGACGCAGTTGTTGGCGATGGTACTGGGCTTTTACATCATT
ATTGTATTGTTGACGAGTGCGTGGCTGGTCAAGAAGTTTGAGCAGAACTT
GCTGGTGATGTTGGGATTTATTATTCCTACTCCTGGCTCACAACCTGTAT
CTACATTGCCGTACTCATTGTCGAATATCCCACCAACTGGATCATCCAAC
GCGTCCGCATCGCCAAATACCTCGGCTTCAACATCATCTGCTGGGGTACC
ATCCTAGCCCTACACTCAGCATGCCACAACTTTGCCGGTCTAGTGACCGT
GCGCACTCTGCTTGGTATCTTCGAAGCCGCATGCCAACCCTCCTTCGTTG
TCCTTTCCGGAATGTGGTATAAGCGTGAAGAACAAGCTGCTACCGTCACC
TTCTGATGTCCATGGAGAATATTAGCTCGACGCCCGCAGGCGGGCCTGAT
CCTAAGGGAGCTTCCACTGCTGTGGAGGATCACAAGCCGCCGCAGGATGT
GTCCCATGTCGAGCGGGCGCTGTCACCCTCCGACAAACTGAAGGCCCCGA
TCGATGCGAACCGCGTCGACAATGAGGTGCTGGAGTATGCCGCGCGCGGC
CAGATTGAGGTCGATGAAGCCGAAAGTCGGCGTCTTCGTCGCATGATTGA
TCGTCGTGTGCTGGTCATCATGATCGTGACATACTTTCTGCAGGCCCTGG
ACAAGGGTACCATGTCGTTTGCTTCCATTATGGGTATTCGCGACGATGCC
CATCTTGTGGGACAACAGGCCCCCAAGTGTTCCTCGACCGCGACGCCCCG
CGGTACTTCATCGCCTTTGGTGTGCACCTCGGCTGCTACTCAGCCATGAC
ACTGGCGGTGATCTTCCTCCGCTTCTACCTGATCCGGGAGAACAAGAAGA
AGGACAAAGCGATGGCAGAGATGGGGATTGCACTGGATGGAGAGGACCAC
CTAGCGAGGGCATTCGAGGACCGAACAGACCGCGAGAATATCCACTTTAG
GTATATTTACTAGATCATTTGTCGGAACCATCGTCCTCATGACAGTGCAG
AATCACTCCCTCAGCACCAAAGTGGGTCTTCTTATCAGCTACTACATCAC
GCTGTCGTTCTGGTCTGCCCAGAACTTGGGCTTGTCCATGGTGACGAGGA
ACATTGCCGGCGCTACTAAGAAGTCCACTGTTGTGGCTGCGACGTTTGTG
TCTTGGGCTGTTGGAAACGCCATCGGTATATGATGAACGGCGGCCAACAA
ATTGTCGGCGGCCTCCTAGCCTACTGTTTCAGTCTAATTGGGTCTGATCG
CGCGCTTAAATCCTGGCAAGCACTTTTCCTCACGTACGGCTGCATTTCCG
TGCTCTGGGGGCTGTTTGTGGTCTGGTGGATGCCCGATTCCCCGATGCGT
GCCAAATGCTTCACCGAAGAGGACAAGCACAAGATGGTTGAGCGTGTGCG
TGCCAACCAGACTGGACTCCAGAATAAGAAGTTCCGCGCGTATCAGATGT
GGGAAGCGTTCCGGGATCCGCAGATGTACTGCTACTGCGCGATTCAGATC
TTTACCACGCTGCCCACGAGTGGACTGGGGGCGTTTGCGAATATCATCAT
TAGTGGGTTCAACTTTACGGAGTTGCAGACGCAGTTGTTGGCGATGGTAC
TGGGCTTTTACATCATTATTGTATTGTTGACGAGTGCGTGGCTGGTCAAG
AAGTTTGAGCAGAACTTGCTGGTGATGTTGGGATTTATTATTCCTACTCC
TGGCTCACAACCTGTATCTACATTGCCGTACTCATTGTCGAATATCCCAC
CAACTGGATCATCCAACGCGTCCGCATCGCCAAATACCTCGGCTTCAACA
TCATCTGCTGGGGTACCATCCTAGCCCTACACTCAGCATGCCACAACTTT
GCCGGTCTAGTGACCGTGCGCACTCTGCTTGGTATCTTCGAAGCCGCATG
CCAACCCTCCTTCGTTGTCCTTTCCGGAATGTGGTATAAGCGTGAAGAAC
AAGCTGCTACCGTCACCTTCTGATGTCCATGGAGAATATTAGCTCGACGC
CCGCAGGCGGGCCTGATCCTAAGGGAGCTTCCACTGCTGTGGAGGATCAC
AAGCCGCCGCAGGATGTGTCCCATGTCGAGCGGGCGCTGTCACCCTCCGA
CAAACTGAAGGCCCCGATCGATGCGAACCGCGTCGACAATGAGGTGCTGG
AGTATGCCGCGCGCGGCCAGATTGAGGTCGATGAAGCCGAAAGTCGGCGT
CTTCGTCGCATGATTGATCGTCGTGTGCTGGTCATCATGATCGTGACATA
CTTTCTGCAGGCCCTGGACAAGGGTACCATGTCGTTTGCTTCCATTATGG
GTATTCGCGACGATGCCCATCTTGTGGGACAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001028-T1.utr5p1 | KJC3_001028-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2600149..2602162 - |
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