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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2603627..2606486- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001030-T1 ID=KJC3_001030-T1|Name=KJC3_001030-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2860bp|location=Sequence derived from alignment at ch1:2603627..2606486- (Aspergillus niger KJC3)
ATGGACTCACCACACCAAATATTCCTCATCCCCGAGGTACTGGAACCAGT
CCTCCTAAACCTAGACACAACCACCCTCCTCTTCTCACAACGCGTCTGCC
ACGTCTGGAACTCACTCATCAAAACATCCCCATCCCTCCAAACGGCCTTA
TTCTTCCGCCCTCAAAAAGAGTCATCGACATCGACACCGGCCCTGAAACC
TAAGCGCACTGTAAACCCCCTCATGAACAAGCTCCTGAAACACTTTGTCA
GCAACCATGGATCAAGTTTCCACAGAGATATTAGCTCTTATCTCTCCCGA
TTCGGACCACAAAAGAGCAGTGATCCCTCCACCACAGAGTTAGAACGTCA
ACACCCCTACCTCCGCCCCGAAGCCAGCTGGCGAGAAATGCTCCTCCACC
AGCCTCCAGCTCCGACTCTGGCGGTCAGTGACGATCTCATACCCCTGAGT
ATCGGTGGGGTAGCATCCAACGAGTCAAACGCAGTCCTGAGACTGAAGCA
TCTAGAGAGGCTTGTTCAGGTGTGTTTCTTGTTCCCAGTGGGAAAAGTTC
TCATCTTCTATCCTATGCATAATCCACCTTGGGGTCGCGCGCCGGTGTCA
TTTCTACGGAGAGTTTTGGATACTTGTGACACTTATATAGTCCCGAGGTA
TTTTGTGCTGACGGGATTGTCCACGGCAGGAGATGCCCCCGTGGAATGTG
GCTGGCCTGCGGGTCTCCCCTGGCTGACTGATGTTGGGAGGTGGCTTAAA
GAGTGGGAGGCTATACGGGAGAGCTGGAGATTGGAGTATCTTACCTCTTT
TATGTAACCATATTTTTATGGAAGTTGAAGGGTTTATGGGAGGTTGAATG
GTATGAAGTACTAGAATGGGTGGGGATAGGTGGTGAAGTGTGGATGTTTG
CATCGGCGCTATATCATGGAAAGTGTGCGTAGAACAACACCTGTTGGTGA
TATTAAGAATTTTCATATGTCCAGTGTATTAGACTGATGGTCAGCAATGA
CTGGAACGGTAGTTAAGATTTTGCTTGTCGAATGACAACTTTGCTGATCT
ATGTGCTCTATTACTATGCAACATCATTTAAGGATACTCACATGGTAGAA
TATACAGATCATTGCATTCGTAAAGAAGACCACAAACCGGGGCACTGCAC
TATGCTGAAGGGTGTATGAGAGCTGGAAAGAAGTAGCTCCATTCTAGGAT
AGTATTAAACGAAGATGCAGCCAAGTACGTACATACGAATCAAACAAATA
GGCGCACACTCTGCAGGCACACACCATTTCTGCCTGCACAGCATATAGAT
ACTGTCCACCGTGACCGCTCCTGCGACCGCCCAATGCGGCAGAAACTAGT
CGACCTCGACCAAAAAACCTCGGATTTAAGCGGATTTAAGAACATACAGT
CCCCCAAAAGTCAACTGGGGATTCTGTGTGTTTTTTGACCGCCTTTTGAA
TTCTGCCGTCTGACATGCCAGCGCCTTGGGAAGTACATGTTCGACACGTA
TTGTGCAATGTTTTAGACACTCCCATGCTATCTGAAAGAGGCCTGCCATA
TGTCTGTATGCTAGATTCAAATTCGAGGCTCTTTGTCGCATTTCAAGCAA
CATTCGACAGGATATGCCATGTTTTTGCGACCTCGACCAACATCCCGCGA
GCGGCAGCTTTAATAGGGCCGTTTTCCTTACATTTGATGATGGAGTCTAA
TAGCTCCTGCGGTCGCTACATACAAAGGGCACTGAGATATCGATGGGGCT
TAGCTCAGAACTGCTCGAAAGTGAAGCCGCTACCTTGAAATATATGAAAC
TGAACAAGTGACATTCTAGTGCCAGCGGTTCACCTTTACAGACCAGTCGT
ATGCCCATCCTATTTACTCGACGCCGACTTGAACGCCCCACCACCGAACA
TGAGATTGGTATACCGCTTATCTTGATGAGCAAGACACCCAGCTGGCCTC
TCGCAAAAGCTTGGAAAACAACAGGGTCTGGCGAACCAAAATTGGCTGTA
TCGCTGAAAGCTAAAGGGCTATATGAGCTAGAAACAATGACTTACAAGCT
GTCTCAATTACGGTTTAATCAGATGGGCTCATTGTTTGAACGAGGCGGCA
TTTTCCTCAACTGTCCCAGAAGCCCTGATGATAGCTTCCCCAGGCTTGTC
ACAGTCGCGCTACGAGTTGGATGAGAACCTCGTTCAAGCCTTCCAAAATG
GATTCGCAGCTGCCGCTGCCGAAGACACGCGTATGAAAAGACAGTAACCA
ATAAAATTGCCCTTGAGATCCTACAACAGAGCAGATGCTTATGGCTGTTG
ACACGTTTACTTAATTTTGACTCAGCTGATGACTACAATCTGTTATTTGC
CGTGTGGGAACATGTATACGGCCAAGGAAAGGATGCCAGGTCTTATTTCA
CCGAGAAGCGATCGTCGTCAAGCTTCATAGAGCTTGACAATGACATCAGA
TTAGAGGACCAGCCGATTCAGAAGATCAAAAAGGCAGAGCGGGACTACTT
TCGGGTTAATACATTCCAGGAGGCTATTGCAAGAAGACTAACACTAGTCT
CGCGGTGGGGTTGCCAATACACGCCACCCCATCAGCAGCATCTCCGAAAA
GCGGGGGAATTTTTTGTCACCGACTACAAGTTGTGGAAGTGGATCATGCT
TTTCTAAGAAGAGTGGGATTGCATTTACTCGCTCGAATAAGCTGAGGGTC
TCTAACTGGTACAGCATTTTCACGGCCCACAATTGGACTGATCAAAGAGT
ACAAGGGATCACACAAGCATGATTATGTGCAAGGATGGAATGACGAGCAT
TTGATCTCTATGAGGTTACCACATCAGTCATGTCCTAATCAGAAAAGTGC
TTCTGTTGCT back to topCoding sequence (CDS) from alignment at ch1:2603627..2606486- >KJC3_001030-T1 ID=KJC3_001030-T1|Name=KJC3_001030-T1|organism=Aspergillus niger KJC3|type=CDS|length=2961bp|location=Sequence derived from alignment at ch1:2603627..2606486- (Aspergillus niger KJC3)
CTGATGACTACAATCTGTTATTTGCCGTGTGGGAACATGTATACGGCCAA
GGAAAGGATGCCAGGTCTTATTTCACCGAGAAGCGATCGTCGTCAAGCTT
CATAGAGCTTGACAATGACATCAGATTAGAGGACCAGCCGATTCAGAAGA
TCAAAAAGGCAGAGCGGGACTACTTTCGGGTTAATACATTCCAGGAGGCT
ATTGCAAGAAGACTAACACTAGTCTCGCGGTGGGGTTGCCAATACACGCC
ACCCCATCAGCAGCATCTCCGAAAAGCGGGGGAATTTTTTGTCACCGACT
ACAAGTTGTGGAAGTGGATCATGCTTTTCTAAGCGGCATTTTCCTCAACT
GTCCCAGAAGCCCTGATGATAGCTTCCCCAGGCTTGTCACAGTCGCGCTA
CGAGTTGGATGAGAACCTCGTTCAAGCCTTCCAAAATGGATTCGCAGCTG
CCGCTGCCGAAGACACGCATGGACTCACCACACCAAATATTCCTCATCCC
CGAGGTACTGGAACCAGTCCTCCTAAACCTAGACACAACCACCCTCCTCT
TCTCACAACGCGTCTGCCACGTCTGGAACTCACTCATCAAAACATCCCCA
TCCCTCCAAACGGCCTTATTCTTCCGCCCTCAAAAAGAGTCATCGACATC
GACACCGGCCCTGAAACCTAAGCGCACTGTAAACCCCCTCATGAACAAGC
TCCTGAAACACTTTGTCAGCAACCATGGATCAAGTTTCCACAGAGATATT
AGCTCTTATCTCTCCCGATTCGGACCACAAAAGAGCAGTGATCCCTCCAC
CACAGAGTTAGAACGTCAACACCCCTACCTCCGCCCCGAAGCCAGCTGGC
GAGAAATGCTCCTCCACCAGCCTCCAGCTCCGACTCTGGCGGTCAGTGAC
GATCTCATACCCCTGAGTATCGGTGGGGTAGCATCCAACGAGTCAAACGC
AGTCCTGAGACTGAAGCATCTAGAGAGGCTTGTTCAGCTGATGACTACAA
TCTGTTATTTGCCGTGTGGGAACATGTATACGGCCAAGGAAAGGATGCCA
GGTCTTATTTCACCGAGAAGCGATCGTCGTCAAGCTTCATAGAGCTTGAC
AATGACATCAGATTAGAGGACCAGCCGATTCAGAAGATCAAAAAGGCAGA
GCGGGACTACTTTCGGGTTAATACATTCCAGGAGGCTATTGCAAGAAGAC
TAACACTAGTCTCGCGGTGGGGTTGCCAATACACGCCACCCCATCAGCAG
CATCTCCGAAAAGCGGGGGAATTTTTTGTCACCGACTACAAGTTGTGGAA
GTGGATCATGCTTTTCTAAGCGGCATTTTCCTCAACTGTCCCAGAAGCCC
TGATGATAGCTTCCCCAGGCTTGTCACAGTCGCGCTACGAGTTGGATGAG
AACCTCGTTCAAGCCTTCCAAAATGGATTCGCAGCTGCCGCTGCCGAAGA
CACGCATGGACTCACCACACCAAATATTCCTCATCCCCGAGGTACTGGAA
CCAGTCCTCCTAAACCTAGACACAACCACCCTCCTCTTCTCACAACGCGT
CTGCCACGTCTGGAACTCACTCATCAAAACATCCCCATCCCTCCAAACGG
CCTTATTCTTCCGCCCTCAAAAAGAGTCATCGACATCGACACCGGCCCTG
AAACCTAAGCGCACTGTAAACCCCCTCATGAACAAGCTCCTGAAACACTT
TGTCAGCAACCATGGATCAAGTTTCCACAGAGATATTAGCTCTTATCTCT
CCCGATTCGGACCACAAAAGAGCAGTGATCCCTCCACCACAGAGTTAGAA
CGTCAACACCCCTACCTCCGCCCCGAAGCCAGCTGGCGAGAAATGCTCCT
CCACCAGCCTCCAGCTCCGACTCTGGCGGTCAGTGACGATCTCATACCCC
TGAGTATCGGTGGGGTAGCATCCAACGAGTCAAACGCAGTCCTGAGACTG
AAGCATCTAGAGAGGCTTGTTCAGCTGATGACTACAATCTGTTATTTGCC
GTGTGGGAACATGTATACGGCCAAGGAAAGGATGCCAGGTCTTATTTCAC
CGAGAAGCGATCGTCGTCAAGCTTCATAGAGCTTGACAATGACATCAGAT
TAGAGGACCAGCCGATTCAGAAGATCAAAAAGGCAGAGCGGGACTACTTT
CGGGTTAATACATTCCAGGAGGCTATTGCAAGAAGACTAACACTAGTCTC
GCGGTGGGGTTGCCAATACACGCCACCCCATCAGCAGCATCTCCGAAAAG
CGGGGGAATTTTTTGTCACCGACTACAAGTTGTGGAAGTGGATCATGCTT
TTCTAAGCGGCATTTTCCTCAACTGTCCCAGAAGCCCTGATGATAGCTTC
CCCAGGCTTGTCACAGTCGCGCTACGAGTTGGATGAGAACCTCGTTCAAG
CCTTCCAAAATGGATTCGCAGCTGCCGCTGCCGAAGACACGCATGGACTC
ACCACACCAAATATTCCTCATCCCCGAGGTACTGGAACCAGTCCTCCTAA
ACCTAGACACAACCACCCTCCTCTTCTCACAACGCGTCTGCCACGTCTGG
AACTCACTCATCAAAACATCCCCATCCCTCCAAACGGCCTTATTCTTCCG
CCCTCAAAAAGAGTCATCGACATCGACACCGGCCCTGAAACCTAAGCGCA
CTGTAAACCCCCTCATGAACAAGCTCCTGAAACACTTTGTCAGCAACCAT
GGATCAAGTTTCCACAGAGATATTAGCTCTTATCTCTCCCGATTCGGACC
ACAAAAGAGCAGTGATCCCTCCACCACAGAGTTAGAACGTCAACACCCCT
ACCTCCGCCCCGAAGCCAGCTGGCGAGAAATGCTCCTCCACCAGCCTCCA
GCTCCGACTCTGGCGGTCAGTGACGATCTCATACCCCTGAGTATCGGTGG
GGTAGCATCCAACGAGTCAAACGCAGTCCTGAGACTGAAGCATCTAGAGA
GGCTTGTTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001030-T1.utr3p1 | KJC3_001030-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2603627..2606486 - |
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