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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2670141..2671658+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001050-T1 ID=KJC3_001050-T1|Name=KJC3_001050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1518bp|location=Sequence derived from alignment at ch1:2670141..2671658+ (Aspergillus niger KJC3)
GAGTATCGGCGCCATGGTTTTTATTGTTGTGTCAGTCCACTCCTCATCGC
ATAATGATACCTCTCTCATTGTCGATGGGATTCCAAGACCGACATTATCA
TCATGTCACGAACATACGCAACTCCCGCTGCAATCATTACGATCTCTATC
CTCTTCCCTGTCTTGGGTACTTTAACAGTGATCCTTCGCTTCTATACCAG
AAGAAAGACAAAATCTGTGTTGTGGATTGACGACTGGTTGACGCTGCCCG
CACTGGTAAATAACATCGGCCCAAGCATTTGAAAGCCAACAATACGAACT
CATTCAGGGACTGGAATATGTTCTCGCCGCCCTGCTGCTCTGGGGAACAA
CAACAGGATCCTTAGGGGGCCTTCTTCCCCAACCCGATGACCCACGCCCA
GATGCTTACATTTTCTCAAACTCTGATCAACAGATCAGACTCTTACAAGT
TCAAATCGCTCTGCTTAATACAGATTCAAATACTAATCCATTATAGATCC
AATATGTCGCTGACATAGTGACTATCTGGGCATTTGGTTTTACGAAACTC
AGCATTCTCTACTTCTACCGCAGCATTTTCTGCAGTAGACGGACCATTCG
GACTGCCTTCCACTCTGTGACCATGTACATGATTGTGCTAGTCTCGGTTT
GGACTGTAGTCTTTGGAGTTGGTACAATCTTTATCTGCGGTGGCCATCCC
GCGAACGCCTGGGGGACTATTGCAGTTGTTACAACCGAATGCAGTCTACA
GGTCCCGATCGTCGAGGGATATGCAATTTCTGATTTTATCATGGACGTGA
TTATATGGCTGCTACCACTGCCGCGGGTAAGTAAATCATGCCAGGGACCA
CAGGCTATCGAGCTCACCCCGCCTCAGATATGGTTGTTGAACATCTCCGT
TCGCCAAAAGATGGCACTTGGGCTAGTCTTTCTTGTTGGTCTCTTGTTAG
TACACTTCCTGCAGAGCCATAGTGTATGCCTGACACGCACAAAGGGCAAT
CGCAGCTTCTGCAACACGGATGGCTATCTACATCGCTCATCTTATCAACC
CCTTTGCTCAATCAGATGGAGAAAGTACGAAACCAGGCACAATACAATGA
CCAAAGCTAACAGAACAGCACTCGTCACATACCTCTTGTTCTGGACCATG
ATCGAATGCGGCCTCGGTGTCATCGTTATCTGCCTCCCTTCTCTGCGGCC
AATGTATAAAAAACGCGAGTTGAATTCTATAATCAACAGTTTCAAAAGAT
ACCTATACCGAAATCCCACGTCGACAACATCGAGCGCTTTACGAAACAAC
AGCCTAAACGGCTTGACAAATTCAAACTCGTCTAATGTGAACCTTGTTAG
ACCATGGCACCCCGGGCCAACAACATCTCCTGCTGTTGGGCACAATGCTT
CGATGGCCCAACATCCGTCAAACACAGAGCAAAGAATTCAAGTCACGAGG
GAGATAGAACTAATAAGACTAGACTCGAGCTAATGTACGGTGACTTGGCT
AGGAGGTAGAAGGTAGCA back to topCoding sequence (CDS) from alignment at ch1:2670141..2671658+ >KJC3_001050-T1 ID=KJC3_001050-T1|Name=KJC3_001050-T1|organism=Aspergillus niger KJC3|type=CDS|length=6822bp|location=Sequence derived from alignment at ch1:2670141..2671658+ (Aspergillus niger KJC3)
ATGTCACGAACATACGCAACTCCCGCTGCAATCATTACGATCTCTATCCT
CTTCCCTGTCTTGGGTACTTTAACAGTGATCCTTCGCTTCTATACCAGAA
GAAAGACAAAATCTGTGTTGTGGATTGACGACTGGTTGACGCTGCCCGCA
CTGGGACTGGAATATGTTCTCGCCGCCCTGCTGCTCTGGGGAACAACAAC
AGGATCCTTAGGGGGCCTTCTTCCCCAACCCGATGACCCACGCCCAGATG
CTTACATTTTCTCAAACTCTGATCAACAGATCAGACTCTTACAAATCCAA
TATGTCGCTGACATAGTGACTATCTGGGCATTTGGTTTTACGAAACTCAG
CATTCTCTACTTCTACCGCAGCATTTTCTGCAGTAGACGGACCATTCGGA
CTGCCTTCCACTCTGTGACCATGTACATGATTGTGCTAGTCTCGGTTTGG
ACTGTAGTCTTTGGAGTTGGTACAATCTTTATCTGCGGTGGCCATCCCGC
GAACGCCTGGGGGACTATTGCAGTTGTTACAACCGAATGCAGTCTACAGG
TCCCGATCGTCGAGGGATATGCAATTTCTGATTTTATCATGGACGTGATT
ATATGGCTGCTACCACTGCCGCGGATATGGTTGTTGAACATCTCCGTTCG
CCAAAAGATGGCACTTGGGCTAGTCTTTCTTGTTGGTCTCTTGGCAATCG
CAGCTTCTGCAACACGGATGGCTATCTACATCGCTCATCTTATCAACCCC
TTTGCTCAATCAGATGGAGAAACACTCGTCACATACCTCTTGTTCTGGAC
CATGATCGAATGCGGCCTCGGTGTCATCGTTATCTGCCTCCCTTCTCTGC
GGCCAATGTATAAAAAACGCGAGTTGAATTCTATAATCAACAGTTTCAAA
AGATACCTATACCGAAATCCCACGTCGACAACATCGAGCGCTTTACGAAA
CAACAGCCTAAACGGCTTGACAAATTCAAACTCGTCTAATGTGAACCTTG
TTAGACCATGGCACCCCGGGCCAACAACATCTCCTGCTGTTGGGCACAAT
GCTTCGATGGCCCAACATCCGTCAAACACAGAGCAAAGAATTCAAGTCAC
GAGGGAGATAGAACTAATAAGACTAGACTCGAGCTAAATGTCACGAACAT
ACGCAACTCCCGCTGCAATCATTACGATCTCTATCCTCTTCCCTGTCTTG
GGTACTTTAACAGTGATCCTTCGCTTCTATACCAGAAGAAAGACAAAATC
TGTGTTGTGGATTGACGACTGGTTGACGCTGCCCGCACTGGGACTGGAAT
ATGTTCTCGCCGCCCTGCTGCTCTGGGGAACAACAACAGGATCCTTAGGG
GGCCTTCTTCCCCAACCCGATGACCCACGCCCAGATGCTTACATTTTCTC
AAACTCTGATCAACAGATCAGACTCTTACAAATCCAATATGTCGCTGACA
TAGTGACTATCTGGGCATTTGGTTTTACGAAACTCAGCATTCTCTACTTC
TACCGCAGCATTTTCTGCAGTAGACGGACCATTCGGACTGCCTTCCACTC
TGTGACCATGTACATGATTGTGCTAGTCTCGGTTTGGACTGTAGTCTTTG
GAGTTGGTACAATCTTTATCTGCGGTGGCCATCCCGCGAACGCCTGGGGG
ACTATTGCAGTTGTTACAACCGAATGCAGTCTACAGGTCCCGATCGTCGA
GGGATATGCAATTTCTGATTTTATCATGGACGTGATTATATGGCTGCTAC
CACTGCCGCGGATATGGTTGTTGAACATCTCCGTTCGCCAAAAGATGGCA
CTTGGGCTAGTCTTTCTTGTTGGTCTCTTGGCAATCGCAGCTTCTGCAAC
ACGGATGGCTATCTACATCGCTCATCTTATCAACCCCTTTGCTCAATCAG
ATGGAGAAACACTCGTCACATACCTCTTGTTCTGGACCATGATCGAATGC
GGCCTCGGTGTCATCGTTATCTGCCTCCCTTCTCTGCGGCCAATGTATAA
AAAACGCGAGTTGAATTCTATAATCAACAGTTTCAAAAGATACCTATACC
GAAATCCCACGTCGACAACATCGAGCGCTTTACGAAACAACAGCCTAAAC
GGCTTGACAAATTCAAACTCGTCTAATGTGAACCTTGTTAGACCATGGCA
CCCCGGGCCAACAACATCTCCTGCTGTTGGGCACAATGCTTCGATGGCCC
AACATCCGTCAAACACAGAGCAAAGAATTCAAGTCACGAGGGAGATAGAA
CTAATAAGACTAGACTCGAGCTAAATGTCACGAACATACGCAACTCCCGC
TGCAATCATTACGATCTCTATCCTCTTCCCTGTCTTGGGTACTTTAACAG
TGATCCTTCGCTTCTATACCAGAAGAAAGACAAAATCTGTGTTGTGGATT
GACGACTGGTTGACGCTGCCCGCACTGGGACTGGAATATGTTCTCGCCGC
CCTGCTGCTCTGGGGAACAACAACAGGATCCTTAGGGGGCCTTCTTCCCC
AACCCGATGACCCACGCCCAGATGCTTACATTTTCTCAAACTCTGATCAA
CAGATCAGACTCTTACAAATCCAATATGTCGCTGACATAGTGACTATCTG
GGCATTTGGTTTTACGAAACTCAGCATTCTCTACTTCTACCGCAGCATTT
TCTGCAGTAGACGGACCATTCGGACTGCCTTCCACTCTGTGACCATGTAC
ATGATTGTGCTAGTCTCGGTTTGGACTGTAGTCTTTGGAGTTGGTACAAT
CTTTATCTGCGGTGGCCATCCCGCGAACGCCTGGGGGACTATTGCAGTTG
TTACAACCGAATGCAGTCTACAGGTCCCGATCGTCGAGGGATATGCAATT
TCTGATTTTATCATGGACGTGATTATATGGCTGCTACCACTGCCGCGGAT
ATGGTTGTTGAACATCTCCGTTCGCCAAAAGATGGCACTTGGGCTAGTCT
TTCTTGTTGGTCTCTTGGCAATCGCAGCTTCTGCAACACGGATGGCTATC
TACATCGCTCATCTTATCAACCCCTTTGCTCAATCAGATGGAGAAACACT
CGTCACATACCTCTTGTTCTGGACCATGATCGAATGCGGCCTCGGTGTCA
TCGTTATCTGCCTCCCTTCTCTGCGGCCAATGTATAAAAAACGCGAGTTG
AATTCTATAATCAACAGTTTCAAAAGATACCTATACCGAAATCCCACGTC
GACAACATCGAGCGCTTTACGAAACAACAGCCTAAACGGCTTGACAAATT
CAAACTCGTCTAATGTGAACCTTGTTAGACCATGGCACCCCGGGCCAACA
ACATCTCCTGCTGTTGGGCACAATGCTTCGATGGCCCAACATCCGTCAAA
CACAGAGCAAAGAATTCAAGTCACGAGGGAGATAGAACTAATAAGACTAG
ACTCGAGCTAAATGTCACGAACATACGCAACTCCCGCTGCAATCATTACG
ATCTCTATCCTCTTCCCTGTCTTGGGTACTTTAACAGTGATCCTTCGCTT
CTATACCAGAAGAAAGACAAAATCTGTGTTGTGGATTGACGACTGGTTGA
CGCTGCCCGCACTGGGACTGGAATATGTTCTCGCCGCCCTGCTGCTCTGG
GGAACAACAACAGGATCCTTAGGGGGCCTTCTTCCCCAACCCGATGACCC
ACGCCCAGATGCTTACATTTTCTCAAACTCTGATCAACAGATCAGACTCT
TACAAATCCAATATGTCGCTGACATAGTGACTATCTGGGCATTTGGTTTT
ACGAAACTCAGCATTCTCTACTTCTACCGCAGCATTTTCTGCAGTAGACG
GACCATTCGGACTGCCTTCCACTCTGTGACCATGTACATGATTGTGCTAG
TCTCGGTTTGGACTGTAGTCTTTGGAGTTGGTACAATCTTTATCTGCGGT
GGCCATCCCGCGAACGCCTGGGGGACTATTGCAGTTGTTACAACCGAATG
CAGTCTACAGGTCCCGATCGTCGAGGGATATGCAATTTCTGATTTTATCA
TGGACGTGATTATATGGCTGCTACCACTGCCGCGGATATGGTTGTTGAAC
ATCTCCGTTCGCCAAAAGATGGCACTTGGGCTAGTCTTTCTTGTTGGTCT
CTTGGCAATCGCAGCTTCTGCAACACGGATGGCTATCTACATCGCTCATC
TTATCAACCCCTTTGCTCAATCAGATGGAGAAACACTCGTCACATACCTC
TTGTTCTGGACCATGATCGAATGCGGCCTCGGTGTCATCGTTATCTGCCT
CCCTTCTCTGCGGCCAATGTATAAAAAACGCGAGTTGAATTCTATAATCA
ACAGTTTCAAAAGATACCTATACCGAAATCCCACGTCGACAACATCGAGC
GCTTTACGAAACAACAGCCTAAACGGCTTGACAAATTCAAACTCGTCTAA
TGTGAACCTTGTTAGACCATGGCACCCCGGGCCAACAACATCTCCTGCTG
TTGGGCACAATGCTTCGATGGCCCAACATCCGTCAAACACAGAGCAAAGA
ATTCAAGTCACGAGGGAGATAGAACTAATAAGACTAGACTCGAGCTAAAT
GTCACGAACATACGCAACTCCCGCTGCAATCATTACGATCTCTATCCTCT
TCCCTGTCTTGGGTACTTTAACAGTGATCCTTCGCTTCTATACCAGAAGA
AAGACAAAATCTGTGTTGTGGATTGACGACTGGTTGACGCTGCCCGCACT
GGGACTGGAATATGTTCTCGCCGCCCTGCTGCTCTGGGGAACAACAACAG
GATCCTTAGGGGGCCTTCTTCCCCAACCCGATGACCCACGCCCAGATGCT
TACATTTTCTCAAACTCTGATCAACAGATCAGACTCTTACAAATCCAATA
TGTCGCTGACATAGTGACTATCTGGGCATTTGGTTTTACGAAACTCAGCA
TTCTCTACTTCTACCGCAGCATTTTCTGCAGTAGACGGACCATTCGGACT
GCCTTCCACTCTGTGACCATGTACATGATTGTGCTAGTCTCGGTTTGGAC
TGTAGTCTTTGGAGTTGGTACAATCTTTATCTGCGGTGGCCATCCCGCGA
ACGCCTGGGGGACTATTGCAGTTGTTACAACCGAATGCAGTCTACAGGTC
CCGATCGTCGAGGGATATGCAATTTCTGATTTTATCATGGACGTGATTAT
ATGGCTGCTACCACTGCCGCGGATATGGTTGTTGAACATCTCCGTTCGCC
AAAAGATGGCACTTGGGCTAGTCTTTCTTGTTGGTCTCTTGGCAATCGCA
GCTTCTGCAACACGGATGGCTATCTACATCGCTCATCTTATCAACCCCTT
TGCTCAATCAGATGGAGAAACACTCGTCACATACCTCTTGTTCTGGACCA
TGATCGAATGCGGCCTCGGTGTCATCGTTATCTGCCTCCCTTCTCTGCGG
CCAATGTATAAAAAACGCGAGTTGAATTCTATAATCAACAGTTTCAAAAG
ATACCTATACCGAAATCCCACGTCGACAACATCGAGCGCTTTACGAAACA
ACAGCCTAAACGGCTTGACAAATTCAAACTCGTCTAATGTGAACCTTGTT
AGACCATGGCACCCCGGGCCAACAACATCTCCTGCTGTTGGGCACAATGC
TTCGATGGCCCAACATCCGTCAAACACAGAGCAAAGAATTCAAGTCACGA
GGGAGATAGAACTAATAAGACTAGACTCGAGCTAAATGTCACGAACATAC
GCAACTCCCGCTGCAATCATTACGATCTCTATCCTCTTCCCTGTCTTGGG
TACTTTAACAGTGATCCTTCGCTTCTATACCAGAAGAAAGACAAAATCTG
TGTTGTGGATTGACGACTGGTTGACGCTGCCCGCACTGGGACTGGAATAT
GTTCTCGCCGCCCTGCTGCTCTGGGGAACAACAACAGGATCCTTAGGGGG
CCTTCTTCCCCAACCCGATGACCCACGCCCAGATGCTTACATTTTCTCAA
ACTCTGATCAACAGATCAGACTCTTACAAATCCAATATGTCGCTGACATA
GTGACTATCTGGGCATTTGGTTTTACGAAACTCAGCATTCTCTACTTCTA
CCGCAGCATTTTCTGCAGTAGACGGACCATTCGGACTGCCTTCCACTCTG
TGACCATGTACATGATTGTGCTAGTCTCGGTTTGGACTGTAGTCTTTGGA
GTTGGTACAATCTTTATCTGCGGTGGCCATCCCGCGAACGCCTGGGGGAC
TATTGCAGTTGTTACAACCGAATGCAGTCTACAGGTCCCGATCGTCGAGG
GATATGCAATTTCTGATTTTATCATGGACGTGATTATATGGCTGCTACCA
CTGCCGCGGATATGGTTGTTGAACATCTCCGTTCGCCAAAAGATGGCACT
TGGGCTAGTCTTTCTTGTTGGTCTCTTGGCAATCGCAGCTTCTGCAACAC
GGATGGCTATCTACATCGCTCATCTTATCAACCCCTTTGCTCAATCAGAT
GGAGAAACACTCGTCACATACCTCTTGTTCTGGACCATGATCGAATGCGG
CCTCGGTGTCATCGTTATCTGCCTCCCTTCTCTGCGGCCAATGTATAAAA
AACGCGAGTTGAATTCTATAATCAACAGTTTCAAAAGATACCTATACCGA
AATCCCACGTCGACAACATCGAGCGCTTTACGAAACAACAGCCTAAACGG
CTTGACAAATTCAAACTCGTCTAATGTGAACCTTGTTAGACCATGGCACC
CCGGGCCAACAACATCTCCTGCTGTTGGGCACAATGCTTCGATGGCCCAA
CATCCGTCAAACACAGAGCAAAGAATTCAAGTCACGAGGGAGATAGAACT
AATAAGACTAGACTCGAGCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001050-T1.utr5p1 | KJC3_001050-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001050-T1.utr3p1 | KJC3_001050-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch1 | supercontig | ch1:2670141..2671658 + |
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