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KJC3_001057-T1, KJC3_001057-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001057-T1
Unique NameKJC3_001057-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2681612..2682946-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001057-T1 ID=KJC3_001057-T1|Name=KJC3_001057-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1335bp|location=Sequence derived from alignment at ch1:2681612..2682946- (Aspergillus niger KJC3)
GCACCTCCCAAGCCCGCCTTAGTAAACTCACCTCATCGTCGGCCTCCTTC
TCCCCCTCCTTTCCCACCAACTTTCTTCGAGACTCACCTCTACTATCTAC
TACCACCTTCCTCCCCCCAGCGCATTCTTTTCCTCTTTCTCCTGGTCGAT
TCCTAGTCCTCGCCCGGAGTCTTTTACCCCCCAGTTCCACTCTTCTTACG
GATTGCTCTGCTTATCCGTACCTCTTCCCCTTTCCCGACCGTCCCGTCAT
TTGTTTATCCGACCGTCACCATGGGTCAGCACTCCGCTATCTGGCAAGGT
ACGACAAGAACACATGCTCCTTTGACATTCCATTCTCTTCTATCTAGCAT
TTTCTTTTGGGTATTCCTAGGCTGACTCTTGCTGTTCTTCCTGCCTAGGA
TATGTCGATTCCAGGTACCGTATAACCTAACCATATTTACCCCGCTTCGG
CCACTGCCGCCCCTCCAAGTTGGTATCGGAATTCTGACGCGAAGCCATTC
AGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGAGCCACGA
CATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGTATGACACGCTC
TCCAGCAACCGCCGGCCTGATCGGCGTGACCTTACGGCCAAGCAAGCGCC
GACCAGCACGAATCCAGCGTTAACGACCACCATAGATCTCCCCCCAAGAA
CTTCAGGGCCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAA
CGGTATCACCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACC
GCAGTCTGTACGGCAAGAAGGTACTATCGCACCCACCCACCCCCTATTAC
CTACCAAAGTATTCCACATGTGCTGATATTGGGGAACAAACAGGGCAAGG
AGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCAC
GCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGT
TGACTACATCAACAACCCCCGGTGAATGGGTCTAAAAGCAGAATGAAATT
GTATTTTGTCTCGCCATGAGGAAGGGACACTCGGTAATACTGGTTATTTA
AATGTAAATCATCATGGTGGTCTCTTTTCTCGATTGTCTTTTGCTCTCCG
GTATTCTTTGCATCAATTGGCATTCATTACACCACGTAGATCCATACCTG
TACATTATATGCTTACAAGTAAAGCCATTGCAGCGAACTCTCTGGGATGG
GGAGTCCAGACCGACTGATTTCACATGCTCATGAAACAAAGTTTACAGCC
CAAAGCTATCTAGCGTCCATCTGTCCCGCATTCCG
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Coding sequence (CDS) from alignment at ch1:2681612..2682946-

>KJC3_001057-T1 ID=KJC3_001057-T1|Name=KJC3_001057-T1|organism=Aspergillus niger KJC3|type=CDS|length=1980bp|location=Sequence derived from alignment at ch1:2681612..2682946- (Aspergillus niger KJC3)
GGCAAGGAGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGC
CCACCACGCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGA
ACCTCGTTGACTACATCAACAACCCCCGGTGAATCTCCCCCCAAGAACTT
CAGGGCCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGG
TATCACCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCA
GTCTGTACGGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGG
TATCCTGAGCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCA
CGGATATGTCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCA
AGGAGGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCAC
CACGCGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCT
CGTTGACTACATCAACAACCCCCGGTGAATCTCCCCCCAAGAACTTCAGG
GCCTTGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATC
ACCGTTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCT
GTACGGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATC
CTGAGCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGA
TATGTCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAGGA
GGGTATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCACG
CGGAGAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGTT
GACTACATCAACAACCCCCGGTGAATCTCCCCCCAAGAACTTCAGGGCCT
TGCCGCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCG
TTGGCGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTAC
GGCAAGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGA
GCCACGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGATATG
TCGATTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAGGAGGGT
ATCGTTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCACGCGGA
GAACGTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGTTGACT
ACATCAACAACCCCCGGTGAATCTCCCCCCAAGAACTTCAGGGCCTTGCC
GCTGCCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCGTTGG
CGGAGAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTACGGCA
AGAAGCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGAGCCA
CGACATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGATATGTCGA
TTCCAGATGGGTCAGCACTCCGCTATCTGGCAAGGGCAAGGAGGGTATCG
TTGTCGTCAAGGCCGTCTCCTGCGTCATGGTCGCCCACCACGCGGAGAAC
GTCCAGACCCCGAATGCCGCTACCGTGGTCGAGAACCTCGTTGACTACAT
CAACAACCCCCGGTGAATCTCCCCCCAAGAACTTCAGGGCCTTGCCGCTG
CCTTCAAGGACCCCAACGCTGCCTGGGGTAACGGTATCACCGTTGGCGGA
GAGAAGTTCGTCACCATCAAGGCTGACGACCGCAGTCTGTACGGCAAGAA
GCTTGATGGGATCTGGCCAATTTGACAAGGCCGGTATCCTGAGCCACGAC
ATCTCCGGCGTTGAGGCCTCCTCTCCCGGCTTCACGGATATGTCGATTCC
AGATGGGTCAGCACTCCGCTATCTGGCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001057KJC3_001057Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001057-T1KJC3_001057-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001057-T1.cdsKJC3_001057-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001057-T1.utr3p1KJC3_001057-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001057-T1.exon5KJC3_001057-T1.exon5Aspergillus niger KJC3exon
KJC3_001057-T1.exon4KJC3_001057-T1.exon4Aspergillus niger KJC3exon
KJC3_001057-T1.exon3KJC3_001057-T1.exon3Aspergillus niger KJC3exon
KJC3_001057-T1.exon2KJC3_001057-T1.exon2Aspergillus niger KJC3exon
KJC3_001057-T1.exon1KJC3_001057-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001057-T1.utr5p1KJC3_001057-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036140
DBxrefInterPro:IPR005455
DBxrefPFAM:PF00235
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2681612..2682946 -
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