|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2752130..2754096+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001084-T1 ID=KJC3_001084-T1|Name=KJC3_001084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1967bp|location=Sequence derived from alignment at ch1:2752130..2754096+ (Aspergillus niger KJC3)
AACAGTTTGGCGGTCCCCGACGGAACATCGCAACAAACACCCCTCGACAT
CAATCGGCAGTTCCTCTGCCTTCAGAGAGGTCGGTGCCAGCAGTGCTTGC
AGGCAAGCCATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAA
TAATGTCTTGTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATT
TCGCCAATCCTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGG
ATTATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGATGTATGGAGCAG
CAAGGCCCAGGGGAAAAGTTGCACTGGCTAACAGCGACAACAGCGTGAAG
CCGAACACCGAGAGAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAA
GAATCGCAGAAAACAGCAGAGTTGGTACGATAGGCATCGAATGTATACTT
TGCGACCACAATGAAGGCTAACGACTTTTCTGTAGGAGAAAGTCAAGACG
AAGGCATCCGAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCG
AGCATTGAAGGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGA
AGGAACAAGTGCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAA
TGCGCAAATGACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATC
GCACTTGGCTGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCA
CTATCAATATCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCG
GCCGGTGGTGAGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAAC
GAACGACTTCCTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATA
CGCTGATATCATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAG
GGTCTATCACAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAG
TGTCGGTGCTGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCT
CTTGTGACGAGCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGA
ACACTGCTCACGAACCCATCGTTCGTACCTCTAGAGGAAGTAGAAATGCG
GGACGAAGAAATTAAACGACTTCGCGAAGGCTGGGAGAAAATGGAAAGCC
GGTGGAGCCAGGCCGTTACGATGATGGATGGCTGGCATAAACGGATCGCA
GATGGAGGCCATTCGATTCAGGCGGAAGAGCTCCGACAAGGCCTAGACCT
ACGCCTGGACATTACGCAAGCACTATCTCAAGACGGGGGGCGAGACACGA
CCATCCAGTCACCCATCTTCGAAGACCAAGAAGCAGAAGAGGAGGAAGAA
AAAAAAACCGCTGCGAAAATTACCACCGAGCCTAGTCGGCCTGCAGAGTC
CCCCAGGAGAACTCGTCAGTCAACGCGAGAAACGAGATCTAGGAGAGCCA
GTAAAGCCTTGAAAGAAAGGAGTGATAACATCATGACTGGACGCTCGCCC
CGGAAGGTCTCATTTACTGCGGGTCTACAAGACTCACCTTGCGAACCGAG
CGCGGACGATGAAACGCTACAAGTAAAAGCACACCGCTCAGAAGCGGTAA
CTCGTAGACCATCAAGGAGGAAGGCTGAATCAAAAGGGCTCTCTCGTCAG
GGAAGCAGCGCTCAAAGTCCCCAGCCCAAAGAGTCACGCCGGGCAACTGC
TATCCAAGCATCAAGCAGCCAAGCTCGCCTGAGCGTGCCCCAAAAGCTAG
CAGCTGCCGAAAGCGAGGCCCGGGAGGCAGAACAGGCTCGCAAAGAAAGC
GAAAGTCGTAAGCGTGGGCGGGCTCTCAAAGGATCCAGCAAAGGACATCG
GGACCGACGCCGGAGCACACTAACTAGCGACGAGCTGGGAGAGCTGATGG
GGATGCCTGCTAAGTGA back to topCoding sequence (CDS) from alignment at ch1:2752130..2754096+ >KJC3_001084-T1 ID=KJC3_001084-T1|Name=KJC3_001084-T1|organism=Aspergillus niger KJC3|type=CDS|length=5229bp|location=Sequence derived from alignment at ch1:2752130..2754096+ (Aspergillus niger KJC3)
ATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAATAATGTCTT
GTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATTTCGCCAATC
CTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGGATTATCAAC
TTGGTCAATGATCTGGTTTTGCGCAGAGATCGTGAAGCCGAACACCGAGA
GAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAAGAATCGCAGAAAA
CAGCAGAGTTGGAGAAAGTCAAGACGAAGGCATCCGAGCTGACCCGTTCG
CTGGCTCTCGCAGAAGCGCAAGAGCGAGCATTGAAGGCGAACGCTTCTAG
TGCCGATTCGACTATTCGAGGACTGAAGGAACAAGTGCAACGTATGAAGA
CGACCATTCAGCAAGTTCGAGCTCAATGCGCAAATGACATCCGCAAACGC
GACCTGGAAATGCAGAAACTGAAATCGCACTTGGCTGAACGCCAGCGCGG
AAAGCGGGAAGGGCTGTCGATGACCACTATCAATATCAACCCAGCAGCCA
GCCAATCATCTCGGTCGAGACTGGCGGCCGGTGGTGAGGGCATCAACGAT
CCTGGATACAGTCTCAAACAGGAAACGAACGACTTCCTTACTGAACTATG
TCAAAACCTCAGCGATGAGAATGATACGCTGATATCATTGGCACGAAACA
CAGTTGAGACTTTGAAGGATCTCCAGGGTCTATCACAAGCCGAAGACGAA
GATAAGTCCGCGACCGGGATGGCAAGTGTCGGTGCTGGACGGTCCCTGCA
AGGCTCGGTAACGGCACTACCGACCTCTTGTGACGAGCTATCAGCACAAA
TGGACCATGTCCTCGAGCATCTACGAACACTGCTCACGAACCCATCGTTC
GTACCTCTAGAGGAAGTAGAAATGCGGGACGAAGAAATTAAACGACTTCG
CGAAGGCTGGGAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGA
TGGATGGCTGGCATAAACGGATCGCAGATGGAGGCCATTCGATTCAGGCG
GAAGAGCTCCGACAAGGCCTAGACCTACGCCTGGACATTACGCAAGCACT
ATCTCAAGACGGGGGGCGAGACACGACCATCCAGTCACCCATCTTCGAAG
ACCAAGAAGCAGAAGAGGAGGAAGAAAAAAAAACCGCTGCGAAAATTACC
ACCGAGCCTAGTCGGCCTGCAGAGTCCCCCAGGAGAACTCGTCAGTCAAC
GCGAGAAACGAGATCTAGGAGAGCCAGTAAAGCCTTGAAAGAAAGGAGTG
ATAACATCATGACTGGACGCTCGCCCCGGAAGGTCTCATTTACTGCGGGT
CTACAAGACTCACCTTGCGAACCGAGCGCGGACGATGAAACGCTACAAGT
AAAAGCACACCGCTCAGAAGCGGTAACTCGTAGACCATCAAGGAGGAAGG
CTGAATCAAAAGGGCTCTCTCGTCAGGGAAGCAGCGCTCAAAGTCCCCAG
CCCAAAGAGTCACGCCGGGCAACTGCTATCCAAGCATCAAGCAGCCAAGC
TCGCCTGAGCGTGCCCCAAAAGCTAGCAGCTGCCGAAAGCGAGGCCCGGG
AGGCAGAACAGGCTCGCAAAGAAAGCGAAAGTCGTAAGCGTGGGCGGGCT
CTCAAAGGATCCAGCAAAGGACATCGGGACCGACGCCGGAGCACACTAAC
TAGCGACGAGCTGGGAGAGCTGATGGGGATGCCTGCTAAGTGAATGGAGC
CACAGAATCTGCAGGCAGCATCTACTTACATCAATAATGTCTTGTTGGCC
AGGGGGCTGCTGAAGAGCGGCCAACCTATTGATTTCGCCAATCCTGAAGA
TGAGGAGGGAGGCACGGCGGCCACAATGGGGAGGATTATCAACTTGGTCA
ATGATCTGGTTTTGCGCAGAGATCGTGAAGCCGAACACCGAGAGAACCTA
GCAACCACAATCCGCACCCTGCGCGCGGAAGAATCGCAGAAAACAGCAGA
GTTGGAGAAAGTCAAGACGAAGGCATCCGAGCTGACCCGTTCGCTGGCTC
TCGCAGAAGCGCAAGAGCGAGCATTGAAGGCGAACGCTTCTAGTGCCGAT
TCGACTATTCGAGGACTGAAGGAACAAGTGCAACGTATGAAGACGACCAT
TCAGCAAGTTCGAGCTCAATGCGCAAATGACATCCGCAAACGCGACCTGG
AAATGCAGAAACTGAAATCGCACTTGGCTGAACGCCAGCGCGGAAAGCGG
GAAGGGCTGTCGATGACCACTATCAATATCAACCCAGCAGCCAGCCAATC
ATCTCGGTCGAGACTGGCGGCCGGTGGTGAGGGCATCAACGATCCTGGAT
ACAGTCTCAAACAGGAAACGAACGACTTCCTTACTGAACTATGTCAAAAC
CTCAGCGATGAGAATGATACGCTGATATCATTGGCACGAAACACAGTTGA
GACTTTGAAGGATCTCCAGGGTCTATCACAAGCCGAAGACGAAGATAAGT
CCGCGACCGGGATGGCAAGTGTCGGTGCTGGACGGTCCCTGCAAGGCTCG
GTAACGGCACTACCGACCTCTTGTGACGAGCTATCAGCACAAATGGACCA
TGTCCTCGAGCATCTACGAACACTGCTCACGAACCCATCGTTCGTACCTC
TAGAGGAAGTAGAAATGCGGGACGAAGAAATTAAACGACTTCGCGAAGGC
TGGGAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGATGGATGG
CTGGCATAAACGGATCGCAGATGGAGGCCATTCGATTCAGGCGGAAGAGC
TCCGACAAGGCCTAGACCTACGCCTGGACATTACGCAAGCACTATCTCAA
GACGGGGGGCGAGACACGACCATCCAGTCACCCATCTTCGAAGACCAAGA
AGCAGAAGAGGAGGAAGAAAAAAAAACCGCTGCGAAAATTACCACCGAGC
CTAGTCGGCCTGCAGAGTCCCCCAGGAGAACTCGTCAGTCAACGCGAGAA
ACGAGATCTAGGAGAGCCAGTAAAGCCTTGAAAGAAAGGAGTGATAACAT
CATGACTGGACGCTCGCCCCGGAAGGTCTCATTTACTGCGGGTCTACAAG
ACTCACCTTGCGAACCGAGCGCGGACGATGAAACGCTACAAGTAAAAGCA
CACCGCTCAGAAGCGGTAACTCGTAGACCATCAAGGAGGAAGGCTGAATC
AAAAGGGCTCTCTCGTCAGGGAAGCAGCGCTCAAAGTCCCCAGCCCAAAG
AGTCACGCCGGGCAACTGCTATCCAAGCATCAAGCAGCCAAGCTCGCCTG
AGCGTGCCCCAAAAGCTAGCAGCTGCCGAAAGCGAGGCCCGGGAGGCAGA
ACAGGCTCGCAAAGAAAGCGAAAGTCGTAAGCGTGGGCGGGCTCTCAAAG
GATCCAGCAAAGGACATCGGGACCGACGCCGGAGCACACTAACTAGCGAC
GAGCTGGGAGAGCTGATGGGGATGCCTGCTAAGTGAATGGAGCCACAGAA
TCTGCAGGCAGCATCTACTTACATCAATAATGTCTTGTTGGCCAGGGGGC
TGCTGAAGAGCGGCCAACCTATTGATTTCGCCAATCCTGAAGATGAGGAG
GGAGGCACGGCGGCCACAATGGGGAGGATTATCAACTTGGTCAATGATCT
GGTTTTGCGCAGAGATCGTGAAGCCGAACACCGAGAGAACCTAGCAACCA
CAATCCGCACCCTGCGCGCGGAAGAATCGCAGAAAACAGCAGAGTTGGAG
AAAGTCAAGACGAAGGCATCCGAGCTGACCCGTTCGCTGGCTCTCGCAGA
AGCGCAAGAGCGAGCATTGAAGGCGAACGCTTCTAGTGCCGATTCGACTA
TTCGAGGACTGAAGGAACAAGTGCAACGTATGAAGACGACCATTCAGCAA
GTTCGAGCTCAATGCGCAAATGACATCCGCAAACGCGACCTGGAAATGCA
GAAACTGAAATCGCACTTGGCTGAACGCCAGCGCGGAAAGCGGGAAGGGC
TGTCGATGACCACTATCAATATCAACCCAGCAGCCAGCCAATCATCTCGG
TCGAGACTGGCGGCCGGTGGTGAGGGCATCAACGATCCTGGATACAGTCT
CAAACAGGAAACGAACGACTTCCTTACTGAACTATGTCAAAACCTCAGCG
ATGAGAATGATACGCTGATATCATTGGCACGAAACACAGTTGAGACTTTG
AAGGATCTCCAGGGTCTATCACAAGCCGAAGACGAAGATAAGTCCGCGAC
CGGGATGGCAAGTGTCGGTGCTGGACGGTCCCTGCAAGGCTCGGTAACGG
CACTACCGACCTCTTGTGACGAGCTATCAGCACAAATGGACCATGTCCTC
GAGCATCTACGAACACTGCTCACGAACCCATCGTTCGTACCTCTAGAGGA
AGTAGAAATGCGGGACGAAGAAATTAAACGACTTCGCGAAGGCTGGGAGA
AAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGATGGATGGCTGGCAT
AAACGGATCGCAGATGGAGGCCATTCGATTCAGGCGGAAGAGCTCCGACA
AGGCCTAGACCTACGCCTGGACATTACGCAAGCACTATCTCAAGACGGGG
GGCGAGACACGACCATCCAGTCACCCATCTTCGAAGACCAAGAAGCAGAA
GAGGAGGAAGAAAAAAAAACCGCTGCGAAAATTACCACCGAGCCTAGTCG
GCCTGCAGAGTCCCCCAGGAGAACTCGTCAGTCAACGCGAGAAACGAGAT
CTAGGAGAGCCAGTAAAGCCTTGAAAGAAAGGAGTGATAACATCATGACT
GGACGCTCGCCCCGGAAGGTCTCATTTACTGCGGGTCTACAAGACTCACC
TTGCGAACCGAGCGCGGACGATGAAACGCTACAAGTAAAAGCACACCGCT
CAGAAGCGGTAACTCGTAGACCATCAAGGAGGAAGGCTGAATCAAAAGGG
CTCTCTCGTCAGGGAAGCAGCGCTCAAAGTCCCCAGCCCAAAGAGTCACG
CCGGGCAACTGCTATCCAAGCATCAAGCAGCCAAGCTCGCCTGAGCGTGC
CCCAAAAGCTAGCAGCTGCCGAAAGCGAGGCCCGGGAGGCAGAACAGGCT
CGCAAAGAAAGCGAAAGTCGTAAGCGTGGGCGGGCTCTCAAAGGATCCAG
CAAAGGACATCGGGACCGACGCCGGAGCACACTAACTAGCGACGAGCTGG
GAGAGCTGATGGGGATGCCTGCTAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001084-T1.utr5p1 | KJC3_001084-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021622 |
| DBxref | PFAM:PF11559 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2752130..2754096 + |
|
