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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2752130..2754096+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001084-T2 ID=KJC3_001084-T2|Name=KJC3_001084-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1967bp|location=Sequence derived from alignment at ch1:2752130..2754096+ (Aspergillus niger KJC3)
AACAGTTTGGCGGTCCCCGACGGAACATCGCAACAAACACCCCTCGACAT
CAATCGGCAGTTCCTCTGCCTTCAGAGAGGTCGGTGCCAGCAGTGCTTGC
AGGCAAGCCATGGAGCCACAGAATCTGCAGGCAGCATCTACTTACATCAA
TAATGTCTTGTTGGCCAGGGGGCTGCTGAAGAGCGGCCAACCTATTGATT
TCGCCAATCCTGAAGATGAGGAGGGAGGCACGGCGGCCACAATGGGGAGG
ATTATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGATGTATGGAGCAG
CAAGGCCCAGGGGAAAAGTTGCACTGGCTAACAGCGACAACAGCGTGAAG
CCGAACACCGAGAGAACCTAGCAACCACAATCCGCACCCTGCGCGCGGAA
GAATCGCAGAAAACAGCAGAGTTGGTACGATAGGCATCGAATGTATACTT
TGCGACCACAATGAAGGCTAACGACTTTTCTGTAGGAGAAAGTCAAGACG
AAGGCATCCGAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCG
AGCATTGAAGGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGA
AGGAACAAGTGCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAA
TGCGCAAATGACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATC
GCACTTGGCTGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCA
CTATCAATATCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCG
GCCGGTGGTGAGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAAC
GAACGACTTCCTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATA
CGCTGATATCATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAG
GGTCTATCACAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAG
TGTCGGTGCTGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCT
CTTGTGACGAGCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGA
ACACTGCTCACGAACCCATCGTTCGTACCTCTAGAGGAAGTAGAAATGCG
GGACGAAGAAATTAAACGACTTCGCGAAGGCTGGGAGAAAATGGAAAGCC
GGTGGAGCCAGGCCGTTACGATGATGGATGGCTGGCATAAACGGATCGCA
GATGGAGGCCATTCGATTCAGGCGGAAGAGCTCCGACAAGGCCTAGACCT
ACGCCTGGACATTACGCAAGCACTATCTCAAGACGGGGGGCGAGACACGA
CCATCCAGTCACCCATCTTCGAAGACCAAGAAGCAGAAGAGGAGGAAGAA
AAAAAAACCGCTGCGAAAATTACCACCGAGCCTAGTCGGCCTGCAGAGTC
CCCCAGGAGAACTCGTCAGTCAACGCGAGAAACGAGATCTAGGAGAGCCA
GTAAAGCCTTGAAAGAAAGGAGTGATAACATCATGACTGGACGCTCGCCC
CGGAAGGTCTCATTTACTGCGGGTCTACAAGACTCACCTTGCGAACCGAG
CGCGGACGATGAAACGCTACAAGTAAAAGCACACCGCTCAGAAGCGGTAA
CTCGTAGACCATCAAGGAGGAAGGCTGAATCAAAAGGGCTCTCTCGTCAG
GGAAGCAGCGCTCAAAGTCCCCAGCCCAAAGAGTCACGCCGGGCAACTGC
TATCCAAGCATCAAGCAGCCAAGCTCGCCTGAGCGTGCCCCAAAAGCTAG
CAGCTGCCGAAAGCGAGGCCCGGGAGGCAGAACAGGCTCGCAAAGAAAGC
GAAAGTCGTAAGCGTGGGCGGGCTCTCAAAGGATCCAGCAAAGGACATCG
GGACCGACGCCGGAGCACACTAACTAGCGACGAGCTGGGAGAGCTGATGG
GGATGCCTGCTAAGTGA back to topCoding sequence (CDS) from alignment at ch1:2752130..2754096+ >KJC3_001084-T2 ID=KJC3_001084-T2|Name=KJC3_001084-T2|organism=Aspergillus niger KJC3|type=CDS|length=4833bp|location=Sequence derived from alignment at ch1:2752130..2754096+ (Aspergillus niger KJC3)
ATGGGGAGGATTATCAACTTGGTCAATGATCTGGTTTTGCGCAGAGATCG
TGAAGCCGAACACCGAGAGAACCTAGCAACCACAATCCGCACCCTGCGCG
CGGAAGAATCGCAGAAAACAGCAGAGTTGGAGAAAGTCAAGACGAAGGCA
TCCGAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAAGAGCGAGCATT
GAAGGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGGACTGAAGGAAC
AAGTGCAACGTATGAAGACGACCATTCAGCAAGTTCGAGCTCAATGCGCA
AATGACATCCGCAAACGCGACCTGGAAATGCAGAAACTGAAATCGCACTT
GGCTGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGATGACCACTATCA
ATATCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGACTGGCGGCCGGT
GGTGAGGGCATCAACGATCCTGGATACAGTCTCAAACAGGAAACGAACGA
CTTCCTTACTGAACTATGTCAAAACCTCAGCGATGAGAATGATACGCTGA
TATCATTGGCACGAAACACAGTTGAGACTTTGAAGGATCTCCAGGGTCTA
TCACAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATGGCAAGTGTCGG
TGCTGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACCGACCTCTTGTG
ACGAGCTATCAGCACAAATGGACCATGTCCTCGAGCATCTACGAACACTG
CTCACGAACCCATCGTTCGTACCTCTAGAGGAAGTAGAAATGCGGGACGA
AGAAATTAAACGACTTCGCGAAGGCTGGGAGAAAATGGAAAGCCGGTGGA
GCCAGGCCGTTACGATGATGGATGGCTGGCATAAACGGATCGCAGATGGA
GGCCATTCGATTCAGGCGGAAGAGCTCCGACAAGGCCTAGACCTACGCCT
GGACATTACGCAAGCACTATCTCAAGACGGGGGGCGAGACACGACCATCC
AGTCACCCATCTTCGAAGACCAAGAAGCAGAAGAGGAGGAAGAAAAAAAA
ACCGCTGCGAAAATTACCACCGAGCCTAGTCGGCCTGCAGAGTCCCCCAG
GAGAACTCGTCAGTCAACGCGAGAAACGAGATCTAGGAGAGCCAGTAAAG
CCTTGAAAGAAAGGAGTGATAACATCATGACTGGACGCTCGCCCCGGAAG
GTCTCATTTACTGCGGGTCTACAAGACTCACCTTGCGAACCGAGCGCGGA
CGATGAAACGCTACAAGTAAAAGCACACCGCTCAGAAGCGGTAACTCGTA
GACCATCAAGGAGGAAGGCTGAATCAAAAGGGCTCTCTCGTCAGGGAAGC
AGCGCTCAAAGTCCCCAGCCCAAAGAGTCACGCCGGGCAACTGCTATCCA
AGCATCAAGCAGCCAAGCTCGCCTGAGCGTGCCCCAAAAGCTAGCAGCTG
CCGAAAGCGAGGCCCGGGAGGCAGAACAGGCTCGCAAAGAAAGCGAAAGT
CGTAAGCGTGGGCGGGCTCTCAAAGGATCCAGCAAAGGACATCGGGACCG
ACGCCGGAGCACACTAACTAGCGACGAGCTGGGAGAGCTGATGGGGATGC
CTGCTAAGTGAATGGGGAGGATTATCAACTTGGTCAATGATCTGGTTTTG
CGCAGAGATCGTGAAGCCGAACACCGAGAGAACCTAGCAACCACAATCCG
CACCCTGCGCGCGGAAGAATCGCAGAAAACAGCAGAGTTGGAGAAAGTCA
AGACGAAGGCATCCGAGCTGACCCGTTCGCTGGCTCTCGCAGAAGCGCAA
GAGCGAGCATTGAAGGCGAACGCTTCTAGTGCCGATTCGACTATTCGAGG
ACTGAAGGAACAAGTGCAACGTATGAAGACGACCATTCAGCAAGTTCGAG
CTCAATGCGCAAATGACATCCGCAAACGCGACCTGGAAATGCAGAAACTG
AAATCGCACTTGGCTGAACGCCAGCGCGGAAAGCGGGAAGGGCTGTCGAT
GACCACTATCAATATCAACCCAGCAGCCAGCCAATCATCTCGGTCGAGAC
TGGCGGCCGGTGGTGAGGGCATCAACGATCCTGGATACAGTCTCAAACAG
GAAACGAACGACTTCCTTACTGAACTATGTCAAAACCTCAGCGATGAGAA
TGATACGCTGATATCATTGGCACGAAACACAGTTGAGACTTTGAAGGATC
TCCAGGGTCTATCACAAGCCGAAGACGAAGATAAGTCCGCGACCGGGATG
GCAAGTGTCGGTGCTGGACGGTCCCTGCAAGGCTCGGTAACGGCACTACC
GACCTCTTGTGACGAGCTATCAGCACAAATGGACCATGTCCTCGAGCATC
TACGAACACTGCTCACGAACCCATCGTTCGTACCTCTAGAGGAAGTAGAA
ATGCGGGACGAAGAAATTAAACGACTTCGCGAAGGCTGGGAGAAAATGGA
AAGCCGGTGGAGCCAGGCCGTTACGATGATGGATGGCTGGCATAAACGGA
TCGCAGATGGAGGCCATTCGATTCAGGCGGAAGAGCTCCGACAAGGCCTA
GACCTACGCCTGGACATTACGCAAGCACTATCTCAAGACGGGGGGCGAGA
CACGACCATCCAGTCACCCATCTTCGAAGACCAAGAAGCAGAAGAGGAGG
AAGAAAAAAAAACCGCTGCGAAAATTACCACCGAGCCTAGTCGGCCTGCA
GAGTCCCCCAGGAGAACTCGTCAGTCAACGCGAGAAACGAGATCTAGGAG
AGCCAGTAAAGCCTTGAAAGAAAGGAGTGATAACATCATGACTGGACGCT
CGCCCCGGAAGGTCTCATTTACTGCGGGTCTACAAGACTCACCTTGCGAA
CCGAGCGCGGACGATGAAACGCTACAAGTAAAAGCACACCGCTCAGAAGC
GGTAACTCGTAGACCATCAAGGAGGAAGGCTGAATCAAAAGGGCTCTCTC
GTCAGGGAAGCAGCGCTCAAAGTCCCCAGCCCAAAGAGTCACGCCGGGCA
ACTGCTATCCAAGCATCAAGCAGCCAAGCTCGCCTGAGCGTGCCCCAAAA
GCTAGCAGCTGCCGAAAGCGAGGCCCGGGAGGCAGAACAGGCTCGCAAAG
AAAGCGAAAGTCGTAAGCGTGGGCGGGCTCTCAAAGGATCCAGCAAAGGA
CATCGGGACCGACGCCGGAGCACACTAACTAGCGACGAGCTGGGAGAGCT
GATGGGGATGCCTGCTAAGTGAATGGGGAGGATTATCAACTTGGTCAATG
ATCTGGTTTTGCGCAGAGATCGTGAAGCCGAACACCGAGAGAACCTAGCA
ACCACAATCCGCACCCTGCGCGCGGAAGAATCGCAGAAAACAGCAGAGTT
GGAGAAAGTCAAGACGAAGGCATCCGAGCTGACCCGTTCGCTGGCTCTCG
CAGAAGCGCAAGAGCGAGCATTGAAGGCGAACGCTTCTAGTGCCGATTCG
ACTATTCGAGGACTGAAGGAACAAGTGCAACGTATGAAGACGACCATTCA
GCAAGTTCGAGCTCAATGCGCAAATGACATCCGCAAACGCGACCTGGAAA
TGCAGAAACTGAAATCGCACTTGGCTGAACGCCAGCGCGGAAAGCGGGAA
GGGCTGTCGATGACCACTATCAATATCAACCCAGCAGCCAGCCAATCATC
TCGGTCGAGACTGGCGGCCGGTGGTGAGGGCATCAACGATCCTGGATACA
GTCTCAAACAGGAAACGAACGACTTCCTTACTGAACTATGTCAAAACCTC
AGCGATGAGAATGATACGCTGATATCATTGGCACGAAACACAGTTGAGAC
TTTGAAGGATCTCCAGGGTCTATCACAAGCCGAAGACGAAGATAAGTCCG
CGACCGGGATGGCAAGTGTCGGTGCTGGACGGTCCCTGCAAGGCTCGGTA
ACGGCACTACCGACCTCTTGTGACGAGCTATCAGCACAAATGGACCATGT
CCTCGAGCATCTACGAACACTGCTCACGAACCCATCGTTCGTACCTCTAG
AGGAAGTAGAAATGCGGGACGAAGAAATTAAACGACTTCGCGAAGGCTGG
GAGAAAATGGAAAGCCGGTGGAGCCAGGCCGTTACGATGATGGATGGCTG
GCATAAACGGATCGCAGATGGAGGCCATTCGATTCAGGCGGAAGAGCTCC
GACAAGGCCTAGACCTACGCCTGGACATTACGCAAGCACTATCTCAAGAC
GGGGGGCGAGACACGACCATCCAGTCACCCATCTTCGAAGACCAAGAAGC
AGAAGAGGAGGAAGAAAAAAAAACCGCTGCGAAAATTACCACCGAGCCTA
GTCGGCCTGCAGAGTCCCCCAGGAGAACTCGTCAGTCAACGCGAGAAACG
AGATCTAGGAGAGCCAGTAAAGCCTTGAAAGAAAGGAGTGATAACATCAT
GACTGGACGCTCGCCCCGGAAGGTCTCATTTACTGCGGGTCTACAAGACT
CACCTTGCGAACCGAGCGCGGACGATGAAACGCTACAAGTAAAAGCACAC
CGCTCAGAAGCGGTAACTCGTAGACCATCAAGGAGGAAGGCTGAATCAAA
AGGGCTCTCTCGTCAGGGAAGCAGCGCTCAAAGTCCCCAGCCCAAAGAGT
CACGCCGGGCAACTGCTATCCAAGCATCAAGCAGCCAAGCTCGCCTGAGC
GTGCCCCAAAAGCTAGCAGCTGCCGAAAGCGAGGCCCGGGAGGCAGAACA
GGCTCGCAAAGAAAGCGAAAGTCGTAAGCGTGGGCGGGCTCTCAAAGGAT
CCAGCAAAGGACATCGGGACCGACGCCGGAGCACACTAACTAGCGACGAG
CTGGGAGAGCTGATGGGGATGCCTGCTAAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021622 |
| DBxref | PFAM:PF11559 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2752130..2754096 + |
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