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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2759982..2761622+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001087-T1 ID=KJC3_001087-T1|Name=KJC3_001087-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1641bp|location=Sequence derived from alignment at ch1:2759982..2761622+ (Aspergillus niger KJC3)
TATTGCTCGAATTCAGCAGTTGTATCACTCTGAGCTAACCTGAGGGCACC
GAAGATGCTTCAGCTTAAACCCAGACTCACCCCAGGCGTCTTCTGTCACT
CTAACATTCAGAATATACACCATCCAACAACATGGCCCCTTCTGTCCTTC
TGTCGAGCCCGGCTCCAACGTCTACCTCAAAAGCATCGCTGACGGAGCAG
GTCCAATTGTCGCCTCCGCTCCCCAATCCCTCTCTCCAGATTACAGCGGA
TCACAATCTCAAATTTGTCCCCGCCCCGGTGTATGCGCCACAGCGAGGTG
AGGTCCTGCTGCAAATCAAAGCCACTGGCGTCTGTGGGTATGCATGAACA
TAGGCTAGATTATCTGAGTACACTACTCGCTAACCCGACCAGGTCCGATA
TCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTGGTCTTCGAAGGGGAT
TGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCTGAAGTGTGGCGATGG
AGTGACCCATCTGCAGCCTGGTTAGTAACGCTGTGTGCCATGTCTGCAAT
GGATAGCTTATGGGGAGGCACAGGTGACAGAGTCGCCGTCGAGCCTGGGG
TTCCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGCTACAACCTTTGC
GAGGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGGTACCATCCAACG
TTACAAGGTGCACCCGGCCAAATGGTTACACAAGTGCGTGTGCCCATTGC
TTAGACTTATGGGATCAAGTCATGCTGAACGTGCTCTACAGGCTTCCGGA
CAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCGTCA
TGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTTGTC
TGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGGCATC
AGGGGCCCACCCCATTGTCATCACAGATATTGAGCCAAAACGACTCGCCT
TTGCCAAGGAATTTGCGCCTTGGTGCAATACATACCAGGTTAATCCGGCA
CTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTCCGGA
CGAGTACAACGCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAGAACA
GTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTGGTT
ATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCATTCATGCATATTTC
TCTGGCAGAAGTAGGCACGCACTTGTCCTGTTAAGCATGAAGAAGAGACG
ACTAACCAAGACAGATCGATTTGCGGTTTATCAACCGGTACCGTGATACA
TGGCCGCCTGCGATTGCGTGTCTCACTGGGGGCATACTGGACCTGAAGAA
GTTGGTGTCGCATGTTTTCCCACTAGAAAAGGCAGTGGATGCCTTGAATC
TGTGTGCGGATCCCAGAAACGGGAGCATCAAGGTGACCATTGTGGATGAG
GTTGAAGCAACGCTGTAAATACTTGCCGAATACAGTTTGGCCGGGGCGGA
GGCAGATAGAGAAGACTAAACGAGACACCTCCCCAGTAGCTATTTCCTCA
ATCGAGAGTCGGCAAGCATCTCACTACTCAACAGCGTTGAC back to topCoding sequence (CDS) from alignment at ch1:2759982..2761622+ >KJC3_001087-T1 ID=KJC3_001087-T1|Name=KJC3_001087-T1|organism=Aspergillus niger KJC3|type=CDS|length=5835bp|location=Sequence derived from alignment at ch1:2759982..2761622+ (Aspergillus niger KJC3)
ATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGCTCCAACGTCTACCTCAAA
AGCATCGCTGACGGAGCAGGTCCAATTGTCGCCTCCGCTCCCCAATCCCT
CTCTCCAGATTACAGCGGATCACAATCTCAAATTTGTCCCCGCCCCGGTG
TATGCGCCACAGCGAGGTGAGGTCCTGCTGCAAATCAAAGCCACTGGCGT
CTGTGGGTCCGATATCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTGG
TCTTCGAAGGGGATTGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCTG
AAGTGTGGCGATGGAGTGACCCATCTGCAGCCTGGTGACAGAGTCGCCGT
CGAGCCTGGGGTTCCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGCT
ACAACCTTTGCGAGGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGGT
ACCATCCAACGTTACAAGGTGCACCCGGCCAAATGGTTACACAAGCTTCC
GGACAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCG
TCATGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTT
GTCTGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGGC
ATCAGGGGCCCACCCCATTGTCATCACAGATATTGAGCCAAAACGACTCG
CCTTTGCCAAGGAATTTGCGCCTTGGTGCAATACATACCAGGTTAATCCG
GCACTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTCC
GGACGAGTACAACGCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAGA
ACAGTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTG
GTTATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCATTCATGCATAT
TTCTCTGGCAGAAATCGATTTGCGGTTTATCAACCGGTACCGTGATACAT
GGCCGCCTGCGATTGCGTGTCTCACTGGGGGCATACTGGACCTGAAGAAG
TTGGTGTCGCATGTTTTCCCACTAGAAAAGGCAGTGGATGCCTTGAATCT
GTGTGCGGATCCCAGAAACGGGAGCATCAAGGTGACCATTGTGGATGAGG
TTGAAGCAACGCTGTAAATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGCT
CCAACGTCTACCTCAAAAGCATCGCTGACGGAGCAGGTCCAATTGTCGCC
TCCGCTCCCCAATCCCTCTCTCCAGATTACAGCGGATCACAATCTCAAAT
TTGTCCCCGCCCCGGTGTATGCGCCACAGCGAGGTGAGGTCCTGCTGCAA
ATCAAAGCCACTGGCGTCTGTGGGTCCGATATCCATTTCTGGAAAACTGG
TCGCATTGGGGAGCTGGTCTTCGAAGGGGATTGCATAATTGGCCATGAAG
CAGCGGGGGTGGTGCTGAAGTGTGGCGATGGAGTGACCCATCTGCAGCCT
GGTGACAGAGTCGCCGTCGAGCCTGGGGTTCCGTGCGAACATTGCTTCCT
CTGTGACGACGGTCGCTACAACCTTTGCGAGGACGTCCAGTTTGCGGGAG
TATATCCTTATGCGGGTACCATCCAACGTTACAAGGTGCACCCGGCCAAA
TGGTTACACAAGCTTCCGGACAATATCTCCTATCTTGAAGGAGCTCTCCT
CGAGCCACTTTCGGTCGTCATGCGCGGTATTCAGGTCGCCCGCCTTCATT
TAGGTCGCGCTGTTGTTGTCTGCGGCGCCGGGCCTATTGGACTGATCGCC
CTCGCAGCTGCTCGGGCATCAGGGGCCCACCCCATTGTCATCACAGATAT
TGAGCCAAAACGACTCGCCTTTGCCAAGGAATTTGCGCCTTGGTGCAATA
CATACCAGGTTAATCCGGCACTAGATGCGGAAGGCAACGCTAAGGCAATC
CGAGCACTTTTTGGTCCGGACGAGTACAACGCCCCAGAAACTGTATTAGA
GTGTACTGGTGTTGAGAACAGTGTGTGTACCGCAGCATTCACCGCTCGTC
GAGGTGGTGCGGTGGTGGTTATCGGCGTTGGAAAAGCAGTGATGAATAAT
TTGCCATTCATGCATATTTCTCTGGCAGAAATCGATTTGCGGTTTATCAA
CCGGTACCGTGATACATGGCCGCCTGCGATTGCGTGTCTCACTGGGGGCA
TACTGGACCTGAAGAAGTTGGTGTCGCATGTTTTCCCACTAGAAAAGGCA
GTGGATGCCTTGAATCTGTGTGCGGATCCCAGAAACGGGAGCATCAAGGT
GACCATTGTGGATGAGGTTGAAGCAACGCTGTAAATGGCCCCTTCTGTCC
TTCTGTCGAGCCCGGCTCCAACGTCTACCTCAAAAGCATCGCTGACGGAG
CAGGTCCAATTGTCGCCTCCGCTCCCCAATCCCTCTCTCCAGATTACAGC
GGATCACAATCTCAAATTTGTCCCCGCCCCGGTGTATGCGCCACAGCGAG
GTGAGGTCCTGCTGCAAATCAAAGCCACTGGCGTCTGTGGGTCCGATATC
CATTTCTGGAAAACTGGTCGCATTGGGGAGCTGGTCTTCGAAGGGGATTG
CATAATTGGCCATGAAGCAGCGGGGGTGGTGCTGAAGTGTGGCGATGGAG
TGACCCATCTGCAGCCTGGTGACAGAGTCGCCGTCGAGCCTGGGGTTCCG
TGCGAACATTGCTTCCTCTGTGACGACGGTCGCTACAACCTTTGCGAGGA
CGTCCAGTTTGCGGGAGTATATCCTTATGCGGGTACCATCCAACGTTACA
AGGTGCACCCGGCCAAATGGTTACACAAGCTTCCGGACAATATCTCCTAT
CTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTCGTCATGCGCGGTATTCA
GGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGTTGTCTGCGGCGCCGGGC
CTATTGGACTGATCGCCCTCGCAGCTGCTCGGGCATCAGGGGCCCACCCC
ATTGTCATCACAGATATTGAGCCAAAACGACTCGCCTTTGCCAAGGAATT
TGCGCCTTGGTGCAATACATACCAGGTTAATCCGGCACTAGATGCGGAAG
GCAACGCTAAGGCAATCCGAGCACTTTTTGGTCCGGACGAGTACAACGCC
CCAGAAACTGTATTAGAGTGTACTGGTGTTGAGAACAGTGTGTGTACCGC
AGCATTCACCGCTCGTCGAGGTGGTGCGGTGGTGGTTATCGGCGTTGGAA
AAGCAGTGATGAATAATTTGCCATTCATGCATATTTCTCTGGCAGAAATC
GATTTGCGGTTTATCAACCGGTACCGTGATACATGGCCGCCTGCGATTGC
GTGTCTCACTGGGGGCATACTGGACCTGAAGAAGTTGGTGTCGCATGTTT
TCCCACTAGAAAAGGCAGTGGATGCCTTGAATCTGTGTGCGGATCCCAGA
AACGGGAGCATCAAGGTGACCATTGTGGATGAGGTTGAAGCAACGCTGTA
AATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGCTCCAACGTCTACCTCAA
AAGCATCGCTGACGGAGCAGGTCCAATTGTCGCCTCCGCTCCCCAATCCC
TCTCTCCAGATTACAGCGGATCACAATCTCAAATTTGTCCCCGCCCCGGT
GTATGCGCCACAGCGAGGTGAGGTCCTGCTGCAAATCAAAGCCACTGGCG
TCTGTGGGTCCGATATCCATTTCTGGAAAACTGGTCGCATTGGGGAGCTG
GTCTTCGAAGGGGATTGCATAATTGGCCATGAAGCAGCGGGGGTGGTGCT
GAAGTGTGGCGATGGAGTGACCCATCTGCAGCCTGGTGACAGAGTCGCCG
TCGAGCCTGGGGTTCCGTGCGAACATTGCTTCCTCTGTGACGACGGTCGC
TACAACCTTTGCGAGGACGTCCAGTTTGCGGGAGTATATCCTTATGCGGG
TACCATCCAACGTTACAAGGTGCACCCGGCCAAATGGTTACACAAGCTTC
CGGACAATATCTCCTATCTTGAAGGAGCTCTCCTCGAGCCACTTTCGGTC
GTCATGCGCGGTATTCAGGTCGCCCGCCTTCATTTAGGTCGCGCTGTTGT
TGTCTGCGGCGCCGGGCCTATTGGACTGATCGCCCTCGCAGCTGCTCGGG
CATCAGGGGCCCACCCCATTGTCATCACAGATATTGAGCCAAAACGACTC
GCCTTTGCCAAGGAATTTGCGCCTTGGTGCAATACATACCAGGTTAATCC
GGCACTAGATGCGGAAGGCAACGCTAAGGCAATCCGAGCACTTTTTGGTC
CGGACGAGTACAACGCCCCAGAAACTGTATTAGAGTGTACTGGTGTTGAG
AACAGTGTGTGTACCGCAGCATTCACCGCTCGTCGAGGTGGTGCGGTGGT
GGTTATCGGCGTTGGAAAAGCAGTGATGAATAATTTGCCATTCATGCATA
TTTCTCTGGCAGAAATCGATTTGCGGTTTATCAACCGGTACCGTGATACA
TGGCCGCCTGCGATTGCGTGTCTCACTGGGGGCATACTGGACCTGAAGAA
GTTGGTGTCGCATGTTTTCCCACTAGAAAAGGCAGTGGATGCCTTGAATC
TGTGTGCGGATCCCAGAAACGGGAGCATCAAGGTGACCATTGTGGATGAG
GTTGAAGCAACGCTGTAAATGGCCCCTTCTGTCCTTCTGTCGAGCCCGGC
TCCAACGTCTACCTCAAAAGCATCGCTGACGGAGCAGGTCCAATTGTCGC
CTCCGCTCCCCAATCCCTCTCTCCAGATTACAGCGGATCACAATCTCAAA
TTTGTCCCCGCCCCGGTGTATGCGCCACAGCGAGGTGAGGTCCTGCTGCA
AATCAAAGCCACTGGCGTCTGTGGGTCCGATATCCATTTCTGGAAAACTG
GTCGCATTGGGGAGCTGGTCTTCGAAGGGGATTGCATAATTGGCCATGAA
GCAGCGGGGGTGGTGCTGAAGTGTGGCGATGGAGTGACCCATCTGCAGCC
TGGTGACAGAGTCGCCGTCGAGCCTGGGGTTCCGTGCGAACATTGCTTCC
TCTGTGACGACGGTCGCTACAACCTTTGCGAGGACGTCCAGTTTGCGGGA
GTATATCCTTATGCGGGTACCATCCAACGTTACAAGGTGCACCCGGCCAA
ATGGTTACACAAGCTTCCGGACAATATCTCCTATCTTGAAGGAGCTCTCC
TCGAGCCACTTTCGGTCGTCATGCGCGGTATTCAGGTCGCCCGCCTTCAT
TTAGGTCGCGCTGTTGTTGTCTGCGGCGCCGGGCCTATTGGACTGATCGC
CCTCGCAGCTGCTCGGGCATCAGGGGCCCACCCCATTGTCATCACAGATA
TTGAGCCAAAACGACTCGCCTTTGCCAAGGAATTTGCGCCTTGGTGCAAT
ACATACCAGGTTAATCCGGCACTAGATGCGGAAGGCAACGCTAAGGCAAT
CCGAGCACTTTTTGGTCCGGACGAGTACAACGCCCCAGAAACTGTATTAG
AGTGTACTGGTGTTGAGAACAGTGTGTGTACCGCAGCATTCACCGCTCGT
CGAGGTGGTGCGGTGGTGGTTATCGGCGTTGGAAAAGCAGTGATGAATAA
TTTGCCATTCATGCATATTTCTCTGGCAGAAATCGATTTGCGGTTTATCA
ACCGGTACCGTGATACATGGCCGCCTGCGATTGCGTGTCTCACTGGGGGC
ATACTGGACCTGAAGAAGTTGGTGTCGCATGTTTTCCCACTAGAAAAGGC
AGTGGATGCCTTGAATCTGTGTGCGGATCCCAGAAACGGGAGCATCAAGG
TGACCATTGTGGATGAGGTTGAAGCAACGCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001087-T1.utr5p1 | KJC3_001087-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001087-T1.utr3p1 | KJC3_001087-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR002328 |
| DBxref | InterPro:IPR013149 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR020843 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2759982..2761622 + |
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