|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2773430..2774898+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001093-T1 ID=KJC3_001093-T1|Name=KJC3_001093-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1469bp|location=Sequence derived from alignment at ch1:2773430..2774898+ (Aspergillus niger KJC3)
CCACATCAGTGTCTGGCGTCGCGTCTTGTCTTGTCACTGTCGACAAATAA
GCCGGCTCCGAGTGGGCACACAATGTCAAATTGGAACATAGCCTCGGCTT
TCTGCATACGGTTAATATATGCTGCTTCCCTAGCCAGGCCAGGATCACAT
CCTTGTCAGTGTCTGAACTGTGATCCAAACTGTGTTGCACTCATACCCCT
TTAATTATGCATCGGCCCCTGACAGACAGCACTTTCTACCGCATCAACGC
GGATATCCTAATCCCTGGAAGGGGAGCACCAATTGCCCGTGGAGCTGTGG
TTTGGAAATCGAAAACAATCCTCTATTCTGGACCGCAGCATGAAGTACCA
GTCGAGTATCAGGATGCTGTTACCACACATGTTCCTGTTGCCATGCCAGG
CATGTGGGATTGCCACATTCACTTCTTAGGCGCAACAGCGGCGACCATGG
ATTCGATTGTAAATACCCCGCAAGCATTAGCAGGGGCACGAAGTGTCCCT
GACTTATATGCAACCATCATGGCGGGATTCACATCAGTTCGCGAAGTTGG
AGGATATGGTTGTGAGCTGGCCAAAGTTATTGACGAGGGCCGCATTCCAG
GACCGACCATCTACGGTGCGCACAGCGCCATCAGCATGACGGCAGGCCAC
GGCGACGTACACGGTGTGAATCTCGAGGGTTTGCGCGACCTATGTACGCA
TGGCCTGCCTTTGACTATCGCAGATGGTGTGCCCGAGTGTCTGCAAGCCG
TACGAAAGCAACTGCGGCACGGAGCACGCATCATCAAGGTCTGCGCCAGT
GGTGGTGTAGTGAGCGCTATCGACGACCCGCAACATCAAGAATTCTCGTT
CGAAGAGCTGAAAGCTATTGTTGACGAGGCAGCGCGAGCAAGGCGCGTTG
TGGCCGCTCATTGTCACGGCAAGGCAGGCATCATGAATGCTCTCCGTGCA
GGTTGTCGCACAATTGAGCACGGCAGCTATCTGGATGAGGAGGCTATCGA
CTTGATGCTCGAGAAGGGCGCGATGTTAGTGGCAACACGCAGCGTTATCG
AGAGTGGACTGGCAATGCGTGATCTCTTTACGCCCGGTTCATACCAGAAG
TTGCTCGAAGTAGCCGATACGCATAAGAGGGCGTATGAGCTAGCAGTCAG
ACGTGGCGTGCCTATCGCTTTGGGTACAGACCAATTCATCAGCTCGGATA
ATCCCGCATTGGGATATGGACGCAATGGCAAGGAGCTGGTATACGCGGTT
GCAGCAGGTATGACACCTCTAGCTGCAATTGAAGCTGCCACGGCCAACGG
GCCGTTAACGCTCGGAGATCAGGCACCAAAGAGTGGCCAATTGAGGGAGG
GATTTGACGCAGACATCATCGCACTGACGGCAAACCCACTGGAAAACATA
ATTGTGGTCTCTGATCCAAAGAATGTCACGCATGTATGGCGATATGGCAA
GCTTGTCAAATCAAACTAA back to topCoding sequence (CDS) from alignment at ch1:2773430..2774898+ >KJC3_001093-T1 ID=KJC3_001093-T1|Name=KJC3_001093-T1|organism=Aspergillus niger KJC3|type=CDS|length=1263bp|location=Sequence derived from alignment at ch1:2773430..2774898+ (Aspergillus niger KJC3)
ATGCATCGGCCCCTGACAGACAGCACTTTCTACCGCATCAACGCGGATAT
CCTAATCCCTGGAAGGGGAGCACCAATTGCCCGTGGAGCTGTGGTTTGGA
AATCGAAAACAATCCTCTATTCTGGACCGCAGCATGAAGTACCAGTCGAG
TATCAGGATGCTGTTACCACACATGTTCCTGTTGCCATGCCAGGCATGTG
GGATTGCCACATTCACTTCTTAGGCGCAACAGCGGCGACCATGGATTCGA
TTGTAAATACCCCGCAAGCATTAGCAGGGGCACGAAGTGTCCCTGACTTA
TATGCAACCATCATGGCGGGATTCACATCAGTTCGCGAAGTTGGAGGATA
TGGTTGTGAGCTGGCCAAAGTTATTGACGAGGGCCGCATTCCAGGACCGA
CCATCTACGGTGCGCACAGCGCCATCAGCATGACGGCAGGCCACGGCGAC
GTACACGGTGTGAATCTCGAGGGTTTGCGCGACCTATGTACGCATGGCCT
GCCTTTGACTATCGCAGATGGTGTGCCCGAGTGTCTGCAAGCCGTACGAA
AGCAACTGCGGCACGGAGCACGCATCATCAAGGTCTGCGCCAGTGGTGGT
GTAGTGAGCGCTATCGACGACCCGCAACATCAAGAATTCTCGTTCGAAGA
GCTGAAAGCTATTGTTGACGAGGCAGCGCGAGCAAGGCGCGTTGTGGCCG
CTCATTGTCACGGCAAGGCAGGCATCATGAATGCTCTCCGTGCAGGTTGT
CGCACAATTGAGCACGGCAGCTATCTGGATGAGGAGGCTATCGACTTGAT
GCTCGAGAAGGGCGCGATGTTAGTGGCAACACGCAGCGTTATCGAGAGTG
GACTGGCAATGCGTGATCTCTTTACGCCCGGTTCATACCAGAAGTTGCTC
GAAGTAGCCGATACGCATAAGAGGGCGTATGAGCTAGCAGTCAGACGTGG
CGTGCCTATCGCTTTGGGTACAGACCAATTCATCAGCTCGGATAATCCCG
CATTGGGATATGGACGCAATGGCAAGGAGCTGGTATACGCGGTTGCAGCA
GGTATGACACCTCTAGCTGCAATTGAAGCTGCCACGGCCAACGGGCCGTT
AACGCTCGGAGATCAGGCACCAAAGAGTGGCCAATTGAGGGAGGGATTTG
ACGCAGACATCATCGCACTGACGGCAAACCCACTGGAAAACATAATTGTG
GTCTCTGATCCAAAGAATGTCACGCATGTATGGCGATATGGCAAGCTTGT
CAAATCAAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001093-T1.utr5p1 | KJC3_001093-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0005900 |
| DBxref | InterPro:IPR032466 |
| DBxref | InterPro:IPR011059 |
| DBxref | InterPro:IPR006680 |
| DBxref | PFAM:PF01979 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2773430..2774898 + |
|
