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KJC3_001124-T1, KJC3_001124-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001124-T1
Unique NameKJC3_001124-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2861603..2862487-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001124-T1 ID=KJC3_001124-T1|Name=KJC3_001124-T1|organism=Aspergillus niger KJC3|type=mRNA|length=885bp|location=Sequence derived from alignment at ch1:2861603..2862487- (Aspergillus niger KJC3)
ATGTTTCCCATCCCGATACCAAGATACCCCCCAGGCCCTAAAGCACAGCA
CATCGTCGAGGAGACATATACCAAAATGGCCCCTCTCGTCTCCTCCCTGG
CCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGCCGCCATTAAATCC
ACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTCCCCGACGACCTTT
CCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCTGCTGCTGCTGCAC
GCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCTCCGGCAATTCTCC
ACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGCGGCGCGGATGCCG
TGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCGCTGATCGGCCGGT
CTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTACGAAGCCGAAGAAG
CCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAGTAGTGGGAA
GGTGGTTACGGCTTATATTCCTGGTGAAGGTGAGATCACTTTCCTCCATT
CGTTTTTTTGTGGTTCGGGTTGGGGATCGGGGGTGAGGAGAATGAGAATA
GATGGGGATAATGGAATTGAGCGAGAGAGGCTAATATCTCTGGTCTGTGT
GTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTGGTCG
TGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCTATGG
ATTTGGTAGGTTTACTTTCTGATATGGGTTTCCTGGGAATTCGGGGGTAG
GTTTGCTAACTTCTCTCAGGGTGGTGTTGCTTCTCGGTTGAACAGTCGGT
CCAAGTATGGTACGAAGAAGCCTAAGAAGGACTAG
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Coding sequence (CDS) from alignment at ch1:2861603..2862487-

>KJC3_001124-T1 ID=KJC3_001124-T1|Name=KJC3_001124-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch1:2861603..2862487- (Aspergillus niger KJC3)
GGTGGTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAA
GCCTAAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGT
CCGTGGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTC
GTGGTGCTATGGATTTGATGTTTCCCATCCCGATACCAAGATACCCCCCA
GGCCCTAAAGCACAGCACATCGTCGAGGAGACATATACCAAAATGGCCCC
TCTCGTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTC
CCGCCGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCC
GCTCCCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGC
TGCTGCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCA
TCCTCCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAA
GTGCGGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCC
GGCGCTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTA
TTACGAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTG
AGGTTGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTG
GTGTTGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCT
AAGAAGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGT
GGTGGTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGG
TGCTATGGATTTGATGTTTCCCATCCCGATACCAAGATACCCCCCAGGCC
CTAAAGCACAGCACATCGTCGAGGAGACATATACCAAAATGGCCCCTCTC
GTCTCCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGC
CGCCATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTC
CCCGACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCT
GCTGCTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCT
CCGGCAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGC
GGCGCGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCG
CTGATCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTAC
GAAGCCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGT
TGAGTAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAGGGTGGTGT
TGCTTCTCGGTTGAACAGTCGGTCCAAGTATGGTACGAAGAAGCCTAAGA
AGGACTAGGACACAATATCCAGCAGCACAGTGTCGTTATGGTCCGTGGTG
GTCGTGTGCCTGATTGTCCTGGTGTGAAGTACCATTTGGTTCGTGGTGCT
ATGGATTTGATGTTTCCCATCCCGATACCAAGATACCCCCCAGGCCCTAA
AGCACAGCACATCGTCGAGGAGACATATACCAAAATGGCCCCTCTCGTCT
CCTCCCTGGCCCTGCGCACGCTCCGGACCCTGGTCCAGCGTCCCGCCGCC
ATTAAATCCACCTCCTGCTCCATCACCACCCTCGCCGCCGCCGCTCCCCG
ACGACCTTTCCAGCCTGTTCTCCGCACGCCCACCGCAGTCGCTGCTGCTG
CTGCTGCACGCAAGACCTCCATCCCCTCTTCCTCCTCCTCCATCCTCCGG
CAATTCTCCACCTCCCCGTTCCGCCAGGCTACCTACAACCAAGTGCGGCG
CGGATGCCGTGTTGCGCAGCGCGCACGTCGCTCCCGGTCTCCGGCGCTGA
TCGGCCGGTCTCAGATGAAGGGAGTGTGTTTGAAGACGGGTATTACGAAG
CCGAAGAAGCCTAACTCCGGTGAGCGGAAGACGGCGAGAGTGAGGTTGAG
TAGTGGGAAGGTGGTTACGGCTTATATTCCTGGTGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001124KJC3_001124Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001124-T1KJC3_001124-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001124-T1.cdsKJC3_001124-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001124-T1.exon3KJC3_001124-T1.exon3Aspergillus niger KJC3exon
KJC3_001124-T1.exon2KJC3_001124-T1.exon2Aspergillus niger KJC3exon
KJC3_001124-T1.exon1KJC3_001124-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG092653KS
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR005679
DBxrefInterPro:IPR006032
DBxrefPFAM:PF00164
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2861603..2862487 -
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