You are here

Home

KJC3_001125-T1, KJC3_001125-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001125-T1
Unique NameKJC3_001125-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2862555..2863731+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001125-T1 ID=KJC3_001125-T1|Name=KJC3_001125-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1177bp|location=Sequence derived from alignment at ch1:2862555..2863731+ (Aspergillus niger KJC3)
GTGCGCCGGAGGAGCTTTGCTGCGTGAACGCGCCAGTGGACTGGCTGCCT
GGCCTGCGATGTCAGAGCTGCTAATACTGGTGCTGGTTGCTGCTACGTCG
GTACCTCTACTGACTGACTACTTACTATCTTCCGACTTTCCAACCTCCAT
CTCACGAACCACACTCATCTAACCTTCCAATCTACCCAACCATCTCTTAA
TCTCATCCACGACACTATACACATACCACCTTACAAATAAAATCCTCACC
ACAACCGTCACAATGGTCCGTCCATCCCCATGCATTCCATCCACCCACAT
CTCCAACTCCCAACCGTCGTTTATACAGAATGAATGATTAACGAAGAATA
GTCCCTCCGTATCGCCCCCCCCTCCAGCAACCCAACCCAAACAACCAACA
CCACAACCCGCGCCGTTATCGATCTCCCTCACCCCTCCAAGGGCGCCCCC
TCCGCCCCCGGTCTCCCCGACACCCTCCGCGACAACATCACCCTCCCAGC
ACCCCGGGGCCCTCCCTCCACAGCGACCGCCACCCCATCCTCGACGCACC
CGCTCGAAGCCCGCCTCCTCGCGTGGCGCGCCACCCAGGATGCATTGAAG
ATGGAGTCGCTGCGTCGGGCGTACGGCATCGCGGAGCCCGTGCGCCGCGG
CATGGAGTTGAAGATCGTGCGTGATGGGACGTTCAGGCCTGCTGCGTTGG
GTGGTCTCGGCATGGGAAACCTCCATGAGGATATTTTGGTTCTGGGTGGT
AGGGATGCGGAGGTGGGATGGGAGGATGTGTTTAAGGGTGAGTGTTCATA
CCCAGTTTTCCATTTCTTTTCCTATTTTGGTAGAGGAGGGGGGAAATTAT
CGTGCTTTTGCTAACGGGTGGGAATTTAGGTGATGAGTTCCGTGAACCGC
CTGCTTTCCATGATGAGATGGAGAAGAGATTGCGTATGGATCACTGAGTG
GTGATGGGGTTGGCAGTTCTTCTGATCTGGACATGACATGGCATGGCATG
GCTTTACTTATTGGTTGGCTGTTGAATGGGTTGTTATGAATCGGATTTTA
GTTTGTTTTTTCTCATTCTTGATACAGGCGCTGTCTGCGGTAAATTATAC
ATTACAATAAATGGTGGTTTCATCTACCTGGTCCTCTCGTACAAGCCGAC
GTTTGGTATGGTGGTTAGGGAAAAGGC
back to top

Coding sequence (CDS) from alignment at ch1:2862555..2863731+

>KJC3_001125-T1 ID=KJC3_001125-T1|Name=KJC3_001125-T1|organism=Aspergillus niger KJC3|type=CDS|length=1521bp|location=Sequence derived from alignment at ch1:2862555..2863731+ (Aspergillus niger KJC3)
ATGTCCCTCCGTATCGCCCCCCCCTCCAGCAACCCAACCCAAACAACCAA
CACCACAACCCGCGCCGTTATCGATCTCCCTCACCCCTCCAAGGGCGCCC
CCTCCGCCCCCGGTCTCCCCGACACCCTCCGCGACAACATCACCCTCCCA
GCACCCCGGGGCCCTCCCTCCACAGCGACCGCCACCCCATCCTCGACGCA
CCCGCTCGAAGCCCGCCTCCTCGCGTGGCGCGCCACCCAGGATGCATTGA
AGATGGAGTCGCTGCGTCGGGCGTACGGCATCGCGGAGCCCGTGCGCCGC
GGCATGGAGTTGAAGATCGTGCGTGATGGGACGTTCAGGCCTGCTGCGTT
GGGTGGTCTCGGCATGGGAAACCTCCATGAGGATATTTTGGTTCTGGGTG
GTAGGGATGCGGAGGTGGGATGGGAGGATGTGTTTAAGGGTGATGAGTTC
CGTGAACCGCCTGCTTTCCATGATGAGATGGAGAAGAGATTGCGTATGGA
TCACTGAATGTCCCTCCGTATCGCCCCCCCCTCCAGCAACCCAACCCAAA
CAACCAACACCACAACCCGCGCCGTTATCGATCTCCCTCACCCCTCCAAG
GGCGCCCCCTCCGCCCCCGGTCTCCCCGACACCCTCCGCGACAACATCAC
CCTCCCAGCACCCCGGGGCCCTCCCTCCACAGCGACCGCCACCCCATCCT
CGACGCACCCGCTCGAAGCCCGCCTCCTCGCGTGGCGCGCCACCCAGGAT
GCATTGAAGATGGAGTCGCTGCGTCGGGCGTACGGCATCGCGGAGCCCGT
GCGCCGCGGCATGGAGTTGAAGATCGTGCGTGATGGGACGTTCAGGCCTG
CTGCGTTGGGTGGTCTCGGCATGGGAAACCTCCATGAGGATATTTTGGTT
CTGGGTGGTAGGGATGCGGAGGTGGGATGGGAGGATGTGTTTAAGGGTGA
TGAGTTCCGTGAACCGCCTGCTTTCCATGATGAGATGGAGAAGAGATTGC
GTATGGATCACTGAATGTCCCTCCGTATCGCCCCCCCCTCCAGCAACCCA
ACCCAAACAACCAACACCACAACCCGCGCCGTTATCGATCTCCCTCACCC
CTCCAAGGGCGCCCCCTCCGCCCCCGGTCTCCCCGACACCCTCCGCGACA
ACATCACCCTCCCAGCACCCCGGGGCCCTCCCTCCACAGCGACCGCCACC
CCATCCTCGACGCACCCGCTCGAAGCCCGCCTCCTCGCGTGGCGCGCCAC
CCAGGATGCATTGAAGATGGAGTCGCTGCGTCGGGCGTACGGCATCGCGG
AGCCCGTGCGCCGCGGCATGGAGTTGAAGATCGTGCGTGATGGGACGTTC
AGGCCTGCTGCGTTGGGTGGTCTCGGCATGGGAAACCTCCATGAGGATAT
TTTGGTTCTGGGTGGTAGGGATGCGGAGGTGGGATGGGAGGATGTGTTTA
AGGGTGATGAGTTCCGTGAACCGCCTGCTTTCCATGATGAGATGGAGAAG
AGATTGCGTATGGATCACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043248proteasome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001125KJC3_001125Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001125-T1KJC3_001125-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001125-T1.utr5p1KJC3_001125-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001125-T1.exon1KJC3_001125-T1.exon1Aspergillus niger KJC3exon
KJC3_001125-T1.exon2KJC3_001125-T1.exon2Aspergillus niger KJC3exon
KJC3_001125-T1.exon3KJC3_001125-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001125-T1.cdsKJC3_001125-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001125-T1.utr3p1KJC3_001125-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092654XA
DBxrefInterPro:IPR008012
DBxrefPFAM:PF05348
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2862555..2863731 +
Powered by Drupal