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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2896104..2897668- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001138-T1 ID=KJC3_001138-T1|Name=KJC3_001138-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1565bp|location=Sequence derived from alignment at ch1:2896104..2897668- (Aspergillus niger KJC3)
ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAA
CCTCACCCGAACAACCCGCCCAGTCCAACGACGACCGCTCCTGCCCGCCG
TTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG
CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAA
AGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGATGCAAGCCCAGTCATAG
CTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA
CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCA
GCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAGCGAGGCCAATGGAAAGG
GATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGGTCACAA
TTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAACATTTT
CGTGGCAGGACAGCGATTGAATGATCTTACGGGCTATTCGGCGATCGAAA
TGTTGAAGAAGGAGATTCACAGACAAGGTATGTGGCACCCATATTCCATA
ACTTAATCATTAGAACTATTGTTTCTAACCTTTGACATGGGTGAATAGAG
GAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCCTA
CGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGAGC
TTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACC
CACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCACA
GGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACAAT
TGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGAC
AAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTCAA
CGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCGCA
AGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAG
GAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATGGC
GCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGACCG
CTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCA
ATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAGGT
ATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGTCA
GCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCG
CGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTCTT
CAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGCTC
TGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATT
ATTCGGCAACGGTGA back to topCoding sequence (CDS) from alignment at ch1:2896104..2897668- >KJC3_001138-T1 ID=KJC3_001138-T1|Name=KJC3_001138-T1|organism=Aspergillus niger KJC3|type=CDS|length=2988bp|location=Sequence derived from alignment at ch1:2896104..2897668- (Aspergillus niger KJC3)
AGGAGCGACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCC
TACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGA
GCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCA
CCCACCTCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCA
CAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACA
ATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGG
ACAAGATCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTC
AACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCG
CAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGA
AGGAAAAGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATG
GCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGAC
CGCTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGC
CAATCGCTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAG
GTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGT
CAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCG
CGCGCGTCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTC
TTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGC
TCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGA
TTATTCGGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCC
TTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACG
ACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGA
ACTTCTCCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTAC
TCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGA
TGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCG
ATGCGGGGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAA
AGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAG
CGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAG
AGCAACGCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATGGACAAC
CTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCTTACGGG
CTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAGAGGAGC
GACTCCGCACCGCCCGCCTCCAAGTCCGCACAGCGAAAGATGCCTACGCA
GCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGAGCTTCT
CCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACCCACC
TCTACCGCAACGACCACACCAACGAAGTAGCCGAGCACGAAGCACAGGAG
GCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACAATTGAG
CAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGACAAGA
TCCGCCAAATGAGTACTTGGGGTACCTGGGGCCTGATGGGCGTCAACGTT
CTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCGCAAGAG
ACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAGGAAA
AGGCGCTTGATCGCATTCAGATCGTGACTGCTCAGAACCAGATGGCGCAG
GAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGACCGCTGA
GACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCAATCG
CTGATACCGATGCAATCGTCACGATTGAGAGCACCGAACCAGAGGTATTT
AGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGTCAGCAA
ACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCGCGCG
TCTCTCCCCTCTTAGAATCCTTGCGCCAATATCTCCACGATCTCTTCAGT
GACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGCTCTGCA
AAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATTATTC
GGCAACGGTGAATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAA
TCAACTCTCAACCTCACCCGAACAACCCGCCCAGTCCAACGACGACCGCT
CCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCT
CCATCTGCCTGCAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCT
GATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCGAAAGAAGATGCAAG
CCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGG
GGAGTCAGCAACAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACA
CAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAAGAGAAGAGCGAGGC
CAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAAC
GCAGGTCACAATTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAG
TCCAACATTTTCGTGGCAGGACAGCGATTGAATGATCTTACGGGCTATTC
GGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264LJU |
| DBxref | InterPro:IPR008839 |
| DBxref | PFAM:PF05546 |
| Product | sensitivity to high expression protein she9 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2896104..2897668 - |
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