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KJC3_001142-T1, KJC3_001142-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001142-T1
Unique NameKJC3_001142-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2907353..2908545+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001142-T1 ID=KJC3_001142-T1|Name=KJC3_001142-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1193bp|location=Sequence derived from alignment at ch1:2907353..2908545+ (Aspergillus niger KJC3)
CTTCGTCTCCCATCGCGACTCTTGGTACCCCCCTCCACTCTACCCCAGGT
ATTTCCCATCCTCAATCCCGACGAATCGGCCCTCTCGCTGCTGGAGAGTT
GCTTTTTGGCGATCAATTGACTCTAATACGCGCGCACACCCTTAGCACAC
AATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGC
CCACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGC
CTGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGAC
CCGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTG
AGAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATG
CAGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGA
GAAGAAGGCCGGTATGCTGTTCTTTCTTGCCCCTTTCCGCTATCTTCCCC
GCGTCCAGCAGAATTTTGCTAACATGGGCCATTTTTTCTTCTTCCCCACG
ATTTAGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCC
CCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCT
CGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGC
CCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAG
GTATGTGAAATCAACAATCTGCATCAGTTGCTCGCCAATTGGCGTTGGCT
GCACATTGGAACGGTCGCTGATGAGTATTATCACAACAGCAAGAGAAGAT
CAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCTTCG
TCCAGAGCCCCCCTGCTGAGAAGCAATAGAGTGCCACCGCTCCCCGGGAG
GAACAGGTATAACAACGGGGTGTGCAGTGGATGGGTAGTATTGGGCTACA
GGAATGAACTGCTGCCTCCCACCGCACGACCTTTGATGACGCCGGTTCTG
TGCCCATCAATCCTGGACACGATCCTTCGCCTCTGTTCTACTTGTTTGTC
AATGTTAGCCCAAAAAGACCTCTGTATCTCGTACTGTGCAATAATCAATC
ATCTCCTTTGTAGCCATAGAAAGATCAGACTGCAGGTTCTTTC
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Coding sequence (CDS) from alignment at ch1:2907353..2908545+

>KJC3_001142-T1 ID=KJC3_001142-T1|Name=KJC3_001142-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch1:2907353..2908545+ (Aspergillus niger KJC3)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGT
GCCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCA
CCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCC
CAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGC
TAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACG
AGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTC
CTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCAC
GGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACG
CTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCC
GCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCG
CTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGA
GGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAG
GCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCC
CAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCG
TCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCC
AAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCA
AGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCA
AGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTCCTTCGT
TCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCT
GCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTC
CTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCC
GAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGA
GGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACC
GCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGCC
TACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGG
CGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCT
TTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCCAAGACC
ATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCAAGAGAA
GATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCT
TCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX5KJC3_001142Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001142-T1KJC3_001142-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001142-T1.utr5p1KJC3_001142-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001142-T1.exon1KJC3_001142-T1.exon1Aspergillus niger KJC3exon
KJC3_001142-T1.exon2KJC3_001142-T1.exon2Aspergillus niger KJC3exon
KJC3_001142-T1.exon3KJC3_001142-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001142-T1.cdsKJC3_001142-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001142-T1.utr3p1KJC3_001142-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036639
DBxrefInterPro:IPR004203
DBxrefPFAM:PF02936
ProductCytochrome c oxidase subunit 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2907353..2908545 +
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