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KJC3_001183-T1, KJC3_001183-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001183-T1
Unique NameKJC3_001183-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3021550..3022708+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001183-T1 ID=KJC3_001183-T1|Name=KJC3_001183-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1159bp|location=Sequence derived from alignment at ch1:3021550..3022708+ (Aspergillus niger KJC3)
ATGGCCTCGCAACAGGTGACGAAGACGCCCTTCCAGAAGATCCTGGACCC
GACCAAGATCGGGACGTGGAACATTGTGCGCCGCCCACCCGTCGAGAATC
ACAGCATCATCCAGGGCAAACCGCGCGAGCAGAACTCCAATGCGTTCAAG
ACGCATCAGGCCAAGGAGGGAACTCGGTTACGAAAGGCCTTGAAGGCACT
TACCCATGGCAAGAACATCTTTGCCTACCACAATATCCGCACGAATCAAG
TCGTGTACTCTCTGACTCGGTATTTGGAGGTGAGTCTCTCTTCCACTAGC
TTACCAGGTCGAAGTGGACCCATCAATCTATCGATCCCATATCAAGCAGA
CGAAGAAAACACACCACTAACTCAACATAAAACAGAACAACACAACTCTC
AAACAACTCCTCTACCACGGCAAAAAGACCGTTCCCGCCCGCCTCCGCAA
AGACATGTGGGTCCCCTATTTCAGCGTGCACTTCAACGACAGCAAGATCG
GGCTACGAGCATACCACCTCCTCCGGGAATTCTCCATGCAGCGCCAACTC
TCCCCGCCCAAAGAAATGATCACCATCACGGACGCCTGGATCGACCAGAA
ACGTCCCCGCGACCCGAAGGGCGCCGAAGACTTCCTCGAGAAATACAAGG
ACAAGATCGGCCGGATCATGCCCAAGCACCACCGCAAGCGCGCCGTCATG
GATCAAAAGGCCACCAGTGTGGCAGATATCGCGGCCGTGCTGAAGATCCA
GGAAGAGGAGGTGCAGAATGGCTTTGCGAATGGAAAGAGGGGCTATCTGA
CCCCTACCGCGCGGAAGAGGAGACGTGCTGCTAGGGCTAAGGAGGAGCAG
GTTGCTGCGGAGCAGGCTGCGAGGGTGGCTGGATTGGAGCAGGCGCTGAG
CAGTGAGGTCGTCGAGTATAAGGTCCAGGAGACCGCGGATACCACTGGTG
CGTTGGAGGATCAGGGAGTTAAGATCCTTTGGAGGGATCTGCATGATGCG
CGGTTTGCGGAGGCTTGGCCTGAGCGTGTGAGACATGGTGAGTTGGAGTT
GTCTCGCGATCATGTCATGCCCGGTCAGAAGGGTGTGAGATCCGAGGTGT
TGGCCGAGGGTGAGTTCCGCGAGAGGACGGAGCAGCAGCAGCAGGGTGAG
AAGAACTAA
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Coding sequence (CDS) from alignment at ch1:3021550..3022708+

>KJC3_001183-T1 ID=KJC3_001183-T1|Name=KJC3_001183-T1|organism=Aspergillus niger KJC3|type=CDS|length=2106bp|location=Sequence derived from alignment at ch1:3021550..3022708+ (Aspergillus niger KJC3)
ATGGCCTCGCAACAGGTGACGAAGACGCCCTTCCAGAAGATCCTGGACCC
GACCAAGATCGGGACGTGGAACATTGTGCGCCGCCCACCCGTCGAGAATC
ACAGCATCATCCAGGGCAAACCGCGCGAGCAGAACTCCAATGCGTTCAAG
ACGCATCAGGCCAAGGAGGGAACTCGGTTACGAAAGGCCTTGAAGGCACT
TACCCATGGCAAGAACATCTTTGCCTACCACAATATCCGCACGAATCAAG
TCGTGTACTCTCTGACTCGGTATTTGGAGAACAACACAACTCTCAAACAA
CTCCTCTACCACGGCAAAAAGACCGTTCCCGCCCGCCTCCGCAAAGACAT
GTGGGTCCCCTATTTCAGCGTGCACTTCAACGACAGCAAGATCGGGCTAC
GAGCATACCACCTCCTCCGGGAATTCTCCATGCAGCGCCAACTCTCCCCG
CCCAAAGAAATGATCACCATCACGGACGCCTGGATCGACCAGAAACGTCC
CCGCGACCCGAAGGGCGCCGAAGACTTCCTCGAGAAATACAAGGACAAGA
TCGGCCGGATCATGCCCAAGCACCACCGCAAGCGCGCCGTCATGGATCAA
AAGGCCACCAGTGTGGCAGATATCGCGGCCGTGCTGAAGATCCAGGAAGA
GGAGGTGCAGAATGGCTTTGCGAATGGAAAGAGGGGCTATCTGACCCCTA
CCGCGCGGAAGAGGAGACGTGCTGCTAGGGCTAAGGAGGAGCAGGTTGCT
GCGGAGCAGGCTGCGAGGGTGGCTGGATTGGAGCAGGCGCTGAGCAGTGA
GGTCGTCGAGTATAAGGTCCAGGAGACCGCGGATACCACTGGTGCGTTGG
AGGATCAGGGAGTTAAGATCCTTTGGAGGGATCTGCATGATGCGCGGTTT
GCGGAGGCTTGGCCTGAGCGTGTGAGACATGGTGAGTTGGAGTTGTCTCG
CGATCATGTCATGCCCGGTCAGAAGGGTGTGAGATCCGAGGTGTTGGCCG
AGGGTGAGTTCCGCGAGAGGACGGAGCAGCAGCAGCAGGGTGAGAAGAAC
TAAATGGCCTCGCAACAGGTGACGAAGACGCCCTTCCAGAAGATCCTGGA
CCCGACCAAGATCGGGACGTGGAACATTGTGCGCCGCCCACCCGTCGAGA
ATCACAGCATCATCCAGGGCAAACCGCGCGAGCAGAACTCCAATGCGTTC
AAGACGCATCAGGCCAAGGAGGGAACTCGGTTACGAAAGGCCTTGAAGGC
ACTTACCCATGGCAAGAACATCTTTGCCTACCACAATATCCGCACGAATC
AAGTCGTGTACTCTCTGACTCGGTATTTGGAGAACAACACAACTCTCAAA
CAACTCCTCTACCACGGCAAAAAGACCGTTCCCGCCCGCCTCCGCAAAGA
CATGTGGGTCCCCTATTTCAGCGTGCACTTCAACGACAGCAAGATCGGGC
TACGAGCATACCACCTCCTCCGGGAATTCTCCATGCAGCGCCAACTCTCC
CCGCCCAAAGAAATGATCACCATCACGGACGCCTGGATCGACCAGAAACG
TCCCCGCGACCCGAAGGGCGCCGAAGACTTCCTCGAGAAATACAAGGACA
AGATCGGCCGGATCATGCCCAAGCACCACCGCAAGCGCGCCGTCATGGAT
CAAAAGGCCACCAGTGTGGCAGATATCGCGGCCGTGCTGAAGATCCAGGA
AGAGGAGGTGCAGAATGGCTTTGCGAATGGAAAGAGGGGCTATCTGACCC
CTACCGCGCGGAAGAGGAGACGTGCTGCTAGGGCTAAGGAGGAGCAGGTT
GCTGCGGAGCAGGCTGCGAGGGTGGCTGGATTGGAGCAGGCGCTGAGCAG
TGAGGTCGTCGAGTATAAGGTCCAGGAGACCGCGGATACCACTGGTGCGT
TGGAGGATCAGGGAGTTAAGATCCTTTGGAGGGATCTGCATGATGCGCGG
TTTGCGGAGGCTTGGCCTGAGCGTGTGAGACATGGTGAGTTGGAGTTGTC
TCGCGATCATGTCATGCCCGGTCAGAAGGGTGTGAGATCCGAGGTGTTGG
CCGAGGGTGAGTTCCGCGAGAGGACGGAGCAGCAGCAGCAGGGTGAGAAG
AACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001183KJC3_001183Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001183-T1.exon1KJC3_001183-T1.exon1Aspergillus niger KJC3exon
KJC3_001183-T1.exon2KJC3_001183-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001183-T1.cdsKJC3_001183-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001183-T1KJC3_001183-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR024629
DBxrefPFAM:PF12829
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3021550..3022708 +
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