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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3033355..3035996- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001188-T1 ID=KJC3_001188-T1|Name=KJC3_001188-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2642bp|location=Sequence derived from alignment at ch1:3033355..3035996- (Aspergillus niger KJC3)
CTCCCTTATCGATAAGAGCCCAGCCACACGTGATGCCCGAGCCAAGAGCA
AAGAAGCAAGCAAGCACAAGCTGACCCCAATCCACATCACCTTTGGCGAC
CTTGTCGGGGCTCCTTCCGGTCCGTGGCGTGTTCTATTCCCGGCTCTTTG
GATAGCGGTGGTACTCGTGCACACTGCCGATCATGGCGGCTGAATTTATC
GGCTACGATGTGCTTGTGACGCTGCGAGCGCCACCAAATGCAACTGTGCA
GGGAGAAGTGGCTAATGTCATCGGCCAACGTCTCATGCTCCGAAATGGTA
GGTATAACCCTTCTCCCCTCAGCCCTATGCTTAGCATCGTTATCCCCCTT
CTGAAAGGATCTCATACCAACGTTTTCATCCAGTGAAACTCTCCTGGATC
GGACACCCGCTCCCTTCGTATTCAATTGAAGCGCCTGATATCGCGGATCT
TTCTTTGGGACCTTCGACTCCGCGCATCACACAGCGTCCGCCGCCGCCTC
AGGGATCTCAAAACATAGCCCCCGCACCTCCGCCCCCAACTTCGTCACAA
AGCTTCGTGGACCCGGCGATTCTAAGTTTTTCGAAGCCACCTTCTGCGCC
ATCTGGCCAGGGTGCAGAGTCGGGTCCTGCACAGCTTCCAGCCCCTTCCA
TTAGCCGGTCCACTTCGCAAAACTTTCAATTTCCGCAAGTGGCTCATCGT
GATCAAGCTGCTGTGCTCAACGAACCGTTCAGCAACCTGGAACTTGATGT
TGGAAAGACCGCAAATGAGAGTCGCAGCGCTGTGCCAAGTGGCCCTGTCC
CCACTGGAAGGGAGAATTTGGTTTCATCGCAATCAACTCCGCAGTCCGCC
GCGAAAGCCAATCGTCGCACTGGCCAACCGAGGACCCAAAAGGCAGTCAA
CGAACACGATGGGGCGACGAATACGGACCCAAGAAGCAAAGGCTGGCGCC
AGACTGCTTTCGTCGAGCCGTCTTATCCGCAGATGAACAAGTCGCTCAAT
AAACAACGCCGGAGGAAGAAAAACAACAGGTCGAACTATGCAGAGGATCC
TAATGGCTGGGCTACAGAGGATGCGACGGATATCCAGGAGATGGGCGAGT
TCGACTTCCAGAGCAACCTTTCCAAATTCGACAAGAGAAAGGTGTTCGAA
GAAATTCGTAACGATGACACTACTGCTGATGAAGATCGGCTGGTTAGCTT
CAACAGGAAAGTACCAAAGCCTGGAACAAATGGTGGGAAGAACCTGCATT
GGACAGAAAACGTCCTTGACAGCCCTGAGGAGACCGAGAGCGAGGATACC
GACCAGATACCCAGCGATGCAAAACTAAGCAGCGGCACCTATTCTGGCCG
GGAACGGTCGAGGACGTCTCGTGCACCGAGCTCTCGCAAAGGAAGCGCCA
TTTTGGGTCAGCCGCTGGTGCCACCGCAGATCAATTCCCTCGGACGCAGT
CAGCTAAGCACGTCTCGCACAACCAGCCCCCGACCGAACAAGACTTCCGT
TTCAGCATCCCCAATAAGTGCCCCTGGTGTACCCGGAGGCTCATTGCGGC
TCACTACAACCAATCGAAGCTGCCCAACTGTCAGTCCATTGCAAACCATT
GAGGTTGAGCAGATTGCAGTTGCCGAACTCGGACTGACCGAGGACATGAT
TACGGAAAATACGGGACGTGGTATCGCGGAAGCTGCTGTTGGACTTCTTA
CTAGCGATGCCGCGGCGCCCACGATGTTGGTGCTGACAGGCAATCACCGA
ACCGGAGCCCGTGCCGTATCGGCGGCTCGTCATCTTCGCAATAGGGGCCA
CCGCGTGACTGTCTGTATGCTAGGCATCGAGCACGAGAATGAGTTGCTAG
AAAGTTGTCGGAAGCAGCTCGAGGTATTTAAGAAAATTGGCGGCCGAGTA
CACCGGTGGGAAGACCTATCGACCCGGCTCTCGACATCCGAATTCGCGCC
TGACTTGGTCGTCGACGCCTTGTTCGGGATTCACATAGCATTTGATGACC
TTCGCACGGATGACCAAGCCACTGCCTTTGAGATGATATCTTGGGCCAAC
CGAAGCAACTTGGAAATTCTATCCGTGGACGTGCCTTCGGGGCTGTCTGC
TATGAGTGGTCAGTATGCCGGATATTGTACCCTGTTTGACGTCGGTGCTA
ACGCGTTTTATAGGCGAGGTTACTACAGTGGAAGGCGGCCGGCTATGCGT
CAATTCGAAATCCGTGGTTTGTCTCGGGGCCCCTAAAACTGGGGTTGTCA
CTGCGCTACTCTCCGGGGAGGGACTATCATGGAATCTCTCTGTGGCCGAC
ATTGGCATTCCTCAGATAGTCTGGAGAAAATATGGCAGTCGGCGGCGGCA
TGGGATCGACTTTGGGAACCGGTGGGTGGTGCCATTACGCTACCAGCCCC
CTCCCGTTTGAGCCGCTAAACGAGATGGGCATGCTTAATGATGATTCAAT
GACCATGAAGGTAAACAAAATGAGCCATACATTGGGGCGTTACTGGAAGA
CAGGAGAATCCCACTAGCAATGCGTGGTTTAGTGGTGGAAAAGGCATGAT
TTATTGTGACGATGGCGCCTCTGGAGCGCTGATTACATTATGTATGTATG
ATAGTGTGTAGTGTAGTTTAGCAATTGATATGACCTCATGCC back to topCoding sequence (CDS) from alignment at ch1:3033355..3035996- >KJC3_001188-T1 ID=KJC3_001188-T1|Name=KJC3_001188-T1|organism=Aspergillus niger KJC3|type=CDS|length=6264bp|location=Sequence derived from alignment at ch1:3033355..3035996- (Aspergillus niger KJC3)
GCGAGGTTACTACAGTGGAAGGCGGCCGGCTATGCGTCAATTCGAAATCC
GTGGTTTGTCTCGGGGCCCCTAAAACTGGGGTTGTCACTGCGCTACTCTC
CGGGGAGGGACTATCATGGAATCTCTCTGTGGCCGACATTGGCATTCCTC
AGATAGTCTGGAGAAAATATGGCAGTCGGCGGCGGCATGGGATCGACTTT
GGGAACCGGTGGGTGGTGCCATTACGCTACCAGCCCCCTCCCGTTTGATG
AAACTCTCCTGGATCGGACACCCGCTCCCTTCGTATTCAATTGAAGCGCC
TGATATCGCGGATCTTTCTTTGGGACCTTCGACTCCGCGCATCACACAGC
GTCCGCCGCCGCCTCAGGGATCTCAAAACATAGCCCCCGCACCTCCGCCC
CCAACTTCGTCACAAAGCTTCGTGGACCCGGCGATTCTAAGTTTTTCGAA
GCCACCTTCTGCGCCATCTGGCCAGGGTGCAGAGTCGGGTCCTGCACAGC
TTCCAGCCCCTTCCATTAGCCGGTCCACTTCGCAAAACTTTCAATTTCCG
CAAGTGGCTCATCGTGATCAAGCTGCTGTGCTCAACGAACCGTTCAGCAA
CCTGGAACTTGATGTTGGAAAGACCGCAAATGAGAGTCGCAGCGCTGTGC
CAAGTGGCCCTGTCCCCACTGGAAGGGAGAATTTGGTTTCATCGCAATCA
ACTCCGCAGTCCGCCGCGAAAGCCAATCGTCGCACTGGCCAACCGAGGAC
CCAAAAGGCAGTCAACGAACACGATGGGGCGACGAATACGGACCCAAGAA
GCAAAGGCTGGCGCCAGACTGCTTTCGTCGAGCCGTCTTATCCGCAGATG
AACAAGTCGCTCAATAAACAACGCCGGAGGAAGAAAAACAACAGGTCGAA
CTATGCAGAGGATCCTAATGGCTGGGCTACAGAGGATGCGACGGATATCC
AGGAGATGGGCGAGTTCGACTTCCAGAGCAACCTTTCCAAATTCGACAAG
AGAAAGGTGTTCGAAGAAATTCGTAACGATGACACTACTGCTGATGAAGA
TCGGCTGGTTAGCTTCAACAGGAAAGTACCAAAGCCTGGAACAAATGGTG
GGAAGAACCTGCATTGGACAGAAAACGTCCTTGACAGCCCTGAGGAGACC
GAGAGCGAGGATACCGACCAGATACCCAGCGATGCAAAACTAAGCAGCGG
CACCTATTCTGGCCGGGAACGGTCGAGGACGTCTCGTGCACCGAGCTCTC
GCAAAGGAAGCGCCATTTTGGGTCAGCCGCTGGTGCCACCGCAGATCAAT
TCCCTCGGACGCAGTCAGCTAAGCACGTCTCGCACAACCAGCCCCCGACC
GAACAAGACTTCCGTTTCAGCATCCCCAATAAGTGCCCCTGGTGTACCCG
GAGGCTCATTGCGGCTCACTACAACCAATCGAAGCTGCCCAACTGTCAGT
CCATTGCAAACCATTGAGGTTGAGCAGATTGCAGTTGCCGAACTCGGACT
GACCGAGGACATGATTACGGAAAATACGGGACGTGGTATCGCGGAAGCTG
CTGTTGGACTTCTTACTAGCGATGCCGCGGCGCCCACGATGTTGGTGCTG
ACAGGCAATCACCGAACCGGAGCCCGTGCCGTATCGGCGGCTCGTCATCT
TCGCAATAGGGGCCACCGCGTGACTGTCTGTATGCTAGGCATCGAGCACG
AGAATGAGTTGCTAGAAAGTTGTCGGAAGCAGCTCGAGGTATTTAAGAAA
ATTGGCGGCCGAGTACACCGGTGGGAAGACCTATCGACCCGGCTCTCGAC
ATCCGAATTCGCGCCTGACTTGGTCGTCGACGCCTTGTTCGGGATTCACA
TAGCATTTGATGACCTTCGCACGGATGACCAAGCCACTGCCTTTGAGATG
ATATCTTGGGCCAACCGAAGCAACTTGGAAATTCTATCCGTGGACGTGCC
TTCGGGGCTGTCTGCTATGAGTGATGGCGGCTGAATTTATCGGCTACGAT
GTGCTTGTGACGCTGCGAGCGCCACCAAATGCAACTGTGCAGGGAGAAGT
GGCTAATGTCATCGGCCAACGTCTCATGCTCCGAAATGGCGAGGTTACTA
CAGTGGAAGGCGGCCGGCTATGCGTCAATTCGAAATCCGTGGTTTGTCTC
GGGGCCCCTAAAACTGGGGTTGTCACTGCGCTACTCTCCGGGGAGGGACT
ATCATGGAATCTCTCTGTGGCCGACATTGGCATTCCTCAGATAGTCTGGA
GAAAATATGGCAGTCGGCGGCGGCATGGGATCGACTTTGGGAACCGGTGG
GTGGTGCCATTACGCTACCAGCCCCCTCCCGTTTGATGAAACTCTCCTGG
ATCGGACACCCGCTCCCTTCGTATTCAATTGAAGCGCCTGATATCGCGGA
TCTTTCTTTGGGACCTTCGACTCCGCGCATCACACAGCGTCCGCCGCCGC
CTCAGGGATCTCAAAACATAGCCCCCGCACCTCCGCCCCCAACTTCGTCA
CAAAGCTTCGTGGACCCGGCGATTCTAAGTTTTTCGAAGCCACCTTCTGC
GCCATCTGGCCAGGGTGCAGAGTCGGGTCCTGCACAGCTTCCAGCCCCTT
CCATTAGCCGGTCCACTTCGCAAAACTTTCAATTTCCGCAAGTGGCTCAT
CGTGATCAAGCTGCTGTGCTCAACGAACCGTTCAGCAACCTGGAACTTGA
TGTTGGAAAGACCGCAAATGAGAGTCGCAGCGCTGTGCCAAGTGGCCCTG
TCCCCACTGGAAGGGAGAATTTGGTTTCATCGCAATCAACTCCGCAGTCC
GCCGCGAAAGCCAATCGTCGCACTGGCCAACCGAGGACCCAAAAGGCAGT
CAACGAACACGATGGGGCGACGAATACGGACCCAAGAAGCAAAGGCTGGC
GCCAGACTGCTTTCGTCGAGCCGTCTTATCCGCAGATGAACAAGTCGCTC
AATAAACAACGCCGGAGGAAGAAAAACAACAGGTCGAACTATGCAGAGGA
TCCTAATGGCTGGGCTACAGAGGATGCGACGGATATCCAGGAGATGGGCG
AGTTCGACTTCCAGAGCAACCTTTCCAAATTCGACAAGAGAAAGGTGTTC
GAAGAAATTCGTAACGATGACACTACTGCTGATGAAGATCGGCTGGTTAG
CTTCAACAGGAAAGTACCAAAGCCTGGAACAAATGGTGGGAAGAACCTGC
ATTGGACAGAAAACGTCCTTGACAGCCCTGAGGAGACCGAGAGCGAGGAT
ACCGACCAGATACCCAGCGATGCAAAACTAAGCAGCGGCACCTATTCTGG
CCGGGAACGGTCGAGGACGTCTCGTGCACCGAGCTCTCGCAAAGGAAGCG
CCATTTTGGGTCAGCCGCTGGTGCCACCGCAGATCAATTCCCTCGGACGC
AGTCAGCTAAGCACGTCTCGCACAACCAGCCCCCGACCGAACAAGACTTC
CGTTTCAGCATCCCCAATAAGTGCCCCTGGTGTACCCGGAGGCTCATTGC
GGCTCACTACAACCAATCGAAGCTGCCCAACTGTCAGTCCATTGCAAACC
ATTGAGGTTGAGCAGATTGCAGTTGCCGAACTCGGACTGACCGAGGACAT
GATTACGGAAAATACGGGACGTGGTATCGCGGAAGCTGCTGTTGGACTTC
TTACTAGCGATGCCGCGGCGCCCACGATGTTGGTGCTGACAGGCAATCAC
CGAACCGGAGCCCGTGCCGTATCGGCGGCTCGTCATCTTCGCAATAGGGG
CCACCGCGTGACTGTCTGTATGCTAGGCATCGAGCACGAGAATGAGTTGC
TAGAAAGTTGTCGGAAGCAGCTCGAGGTATTTAAGAAAATTGGCGGCCGA
GTACACCGGTGGGAAGACCTATCGACCCGGCTCTCGACATCCGAATTCGC
GCCTGACTTGGTCGTCGACGCCTTGTTCGGGATTCACATAGCATTTGATG
ACCTTCGCACGGATGACCAAGCCACTGCCTTTGAGATGATATCTTGGGCC
AACCGAAGCAACTTGGAAATTCTATCCGTGGACGTGCCTTCGGGGCTGTC
TGCTATGAGTGATGGCGGCTGAATTTATCGGCTACGATGTGCTTGTGACG
CTGCGAGCGCCACCAAATGCAACTGTGCAGGGAGAAGTGGCTAATGTCAT
CGGCCAACGTCTCATGCTCCGAAATGGCGAGGTTACTACAGTGGAAGGCG
GCCGGCTATGCGTCAATTCGAAATCCGTGGTTTGTCTCGGGGCCCCTAAA
ACTGGGGTTGTCACTGCGCTACTCTCCGGGGAGGGACTATCATGGAATCT
CTCTGTGGCCGACATTGGCATTCCTCAGATAGTCTGGAGAAAATATGGCA
GTCGGCGGCGGCATGGGATCGACTTTGGGAACCGGTGGGTGGTGCCATTA
CGCTACCAGCCCCCTCCCGTTTGATGAAACTCTCCTGGATCGGACACCCG
CTCCCTTCGTATTCAATTGAAGCGCCTGATATCGCGGATCTTTCTTTGGG
ACCTTCGACTCCGCGCATCACACAGCGTCCGCCGCCGCCTCAGGGATCTC
AAAACATAGCCCCCGCACCTCCGCCCCCAACTTCGTCACAAAGCTTCGTG
GACCCGGCGATTCTAAGTTTTTCGAAGCCACCTTCTGCGCCATCTGGCCA
GGGTGCAGAGTCGGGTCCTGCACAGCTTCCAGCCCCTTCCATTAGCCGGT
CCACTTCGCAAAACTTTCAATTTCCGCAAGTGGCTCATCGTGATCAAGCT
GCTGTGCTCAACGAACCGTTCAGCAACCTGGAACTTGATGTTGGAAAGAC
CGCAAATGAGAGTCGCAGCGCTGTGCCAAGTGGCCCTGTCCCCACTGGAA
GGGAGAATTTGGTTTCATCGCAATCAACTCCGCAGTCCGCCGCGAAAGCC
AATCGTCGCACTGGCCAACCGAGGACCCAAAAGGCAGTCAACGAACACGA
TGGGGCGACGAATACGGACCCAAGAAGCAAAGGCTGGCGCCAGACTGCTT
TCGTCGAGCCGTCTTATCCGCAGATGAACAAGTCGCTCAATAAACAACGC
CGGAGGAAGAAAAACAACAGGTCGAACTATGCAGAGGATCCTAATGGCTG
GGCTACAGAGGATGCGACGGATATCCAGGAGATGGGCGAGTTCGACTTCC
AGAGCAACCTTTCCAAATTCGACAAGAGAAAGGTGTTCGAAGAAATTCGT
AACGATGACACTACTGCTGATGAAGATCGGCTGGTTAGCTTCAACAGGAA
AGTACCAAAGCCTGGAACAAATGGTGGGAAGAACCTGCATTGGACAGAAA
ACGTCCTTGACAGCCCTGAGGAGACCGAGAGCGAGGATACCGACCAGATA
CCCAGCGATGCAAAACTAAGCAGCGGCACCTATTCTGGCCGGGAACGGTC
GAGGACGTCTCGTGCACCGAGCTCTCGCAAAGGAAGCGCCATTTTGGGTC
AGCCGCTGGTGCCACCGCAGATCAATTCCCTCGGACGCAGTCAGCTAAGC
ACGTCTCGCACAACCAGCCCCCGACCGAACAAGACTTCCGTTTCAGCATC
CCCAATAAGTGCCCCTGGTGTACCCGGAGGCTCATTGCGGCTCACTACAA
CCAATCGAAGCTGCCCAACTGTCAGTCCATTGCAAACCATTGAGGTTGAG
CAGATTGCAGTTGCCGAACTCGGACTGACCGAGGACATGATTACGGAAAA
TACGGGACGTGGTATCGCGGAAGCTGCTGTTGGACTTCTTACTAGCGATG
CCGCGGCGCCCACGATGTTGGTGCTGACAGGCAATCACCGAACCGGAGCC
CGTGCCGTATCGGCGGCTCGTCATCTTCGCAATAGGGGCCACCGCGTGAC
TGTCTGTATGCTAGGCATCGAGCACGAGAATGAGTTGCTAGAAAGTTGTC
GGAAGCAGCTCGAGGTATTTAAGAAAATTGGCGGCCGAGTACACCGGTGG
GAAGACCTATCGACCCGGCTCTCGACATCCGAATTCGCGCCTGACTTGGT
CGTCGACGCCTTGTTCGGGATTCACATAGCATTTGATGACCTTCGCACGG
ATGACCAAGCCACTGCCTTTGAGATGATATCTTGGGCCAACCGAAGCAAC
TTGGAAATTCTATCCGTGGACGTGCCTTCGGGGCTGTCTGCTATGAGTGA
TGGCGGCTGAATTTATCGGCTACGATGTGCTTGTGACGCTGCGAGCGCCA
CCAAATGCAACTGTGCAGGGAGAAGTGGCTAATGTCATCGGCCAACGTCT
CATGCTCCGAAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001188-T1.utr3p1 | KJC3_001188-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001188-T1.utr5p1 | KJC3_001188-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.14 |
| Note | antiSMASH:Cluster_1.13 |
| DBxref | InterPro:IPR025762 |
| DBxref | InterPro:IPR036652 |
| DBxref | InterPro:IPR004443 |
| DBxref | InterPro:IPR019050 |
| DBxref | PFAM:PF03853 |
| DBxref | PFAM:PF09532 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3033355..3035996 - |
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