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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3060869..3064861+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001195-T1 ID=KJC3_001195-T1|Name=KJC3_001195-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3993bp|location=Sequence derived from alignment at ch1:3060869..3064861+ (Aspergillus niger KJC3)
TACTAAGACTGAACATCCAATGAGATCCGCGCAACCTGCAGGATGGGCCC
AGCTGAGGCCTGGAGCACCTGCAGGTATTCGCCATGAGTCATGGCTGGTC
CGGCCTATCATCAACGCGGGCAGCCGTTCTCAACACGACTAGCAAGGAAG
ATGACGATATCCTTCGCCTGGGCTCCTAAAGGAGGGGGAGAAAAGTACCG
TTTCATGGGTGGTGATAATGGTGGCGGTGGTGATCCTGCTGCTGCTGCTG
CTGGTGGCGGTCATCCAAGACGACAGAGCGGAATAGAACATTTCCACCAT
CGCATGCAGCACGATCAGCATAACAGGAAAAGAGCCCATGACATGCAGCA
TTTGCGGGAGACTTCTATACGTTTCTGTATGTAGGGAAGTGGATTGATCC
ACTCTACTTCAATGACAGTGACGGGCAAGCAGAACATGTCTCTTTGAACC
AGACGGACAGACGGCGGCAAAGGGGGGTTTGGCTGCAGAACCGGCGCATC
TTTGCGGCCAATCAGGCTTGTGGGAAGTAGAATTTCATTGTTGGGCAACA
GCGCTGAATGGCGGTTAGGCTGCAGCGATGTTCGTCCTGGACTGTGAAAG
CCTGGGCCTGAACACAGTAGCAAACCCGCTAGTCGGTCGGCCACATGCAG
GTAGTGTGCACCATGACGGCGGCCTTGCTTGTTCTTTTCTCTTCATCTTC
CATCTGATGGTCTTGCTCATCCGTCATCGCCCATCCAACATCAGATCAGA
CTTTTGCTGCCGCCTTGTTACTCCGGGCTGTAGTTGCTGGTCGCCCTGGG
AAGATGTTGGGTTTTCTTACTTGCTGCTGCATCGCCCCATACCATTGCGG
CTGAGGAAGGCTGCCTGCGATACGAAGCCCGGGCAAACACGCGGCCAGAG
AGGCAGTCGCGGGCTCGCGACTACCGATTATCATTCATCGAGAAGAGGGG
GGTGGATATAAAAAGATGCAGGTCAAAGGGGCGAATGATAAGGCGCCAAA
ATTGCCAGGGCAATTCCCCTTGGCCATGCCCGGGCGATGTCGCGCCCTGC
TAATTCCGTCTTGCGCAGCGATGGAGGGACCTGCGCGCTTTTCCCCTGGT
CCTTTCATTTCGACGGCGCGTCGTGATTGAATGATTCTCATGGTCACAAG
CAAAGACTCCAGTAGCTCCGCGACCATGATATCCCGAATCTTTTGGGGTT
GGATGGTTGCTTCTGCTGGGTATGCAGCTTGCCAAACCTAATGGCAAGGC
AGAAAGCACCAGGGATCTTCATCTCCTGAAACAATCTTACACCATGATTA
TTGCCGGAAGTCCGTCGACATTAAAAGAGGCCAGTTGACCCCTCCATGGC
CCTTCCCTGGCGCGTTCGGAGATATAAGGAGGCTATACTTGCTCGCTCTT
TGCTCTTGACCCCGCTTCCCCCATTTTCCGTTTTATCCGATTCCCATCCC
ATCTCCTAGGGTTTCTGCTTCTGCTCGGGCTCTTCTTCTCCTTCTTGTTG
CTTATCTTAACAGCTCCCTGCTCCCTGCCTGAGGATTGACATACTTACGA
GTCCCCGTGGCCGCATCCTCTCGGTCCCCAACAGGAGCGGAGTCTTACAG
TATGGCCGTCATCAACCAAAACAACAACAACAACAACCACAACCAGGTGC
CTCCTGCACCTCCAACCCACCATCCCCCTATGCGCCCGAATGAGGGCGTT
CGTGTGGCGCAAGCGGGCTCGCCACGTCCCATGAACTCGGAGTATTTGGT
CCATCAGATGCATCGGCTTAATGTTCAGCCGGAGAAGCCCCAGGCTGTCA
ACAATGCGAAGCCCAAGGAGACCACTGTCGTTGAGGAGATTGATGCTCGT
GCTCCCTTCTACTACCTGGGGTACACCTTCTTCAAGGCCGATGCCGTGCC
CGGGCACAAGTCCACCTGGAACCATGTGGAGCGGACCAAGATGAACCTCA
GCCAGTCCGATCTGATGAAGCTGGTGCACAAGCGAACCAAGAAGATTCCC
ATTGCGGAGCAATACCAGTCCCTGTCCAAGGTCAAGCGTGCGCATGTGGA
TCAGCTGATCAGCGAACTTAGGAAGAGTGATCCCCATTTTGAATGGACCT
GCGTCTATGTCAAGGAGGATGAGAAGCCATTCAAGGGTAAGAATTCCCGG
CGGGGTGACTATGAGACGCTCTCCGTGAACGTCGTCATTATGAGAAAGGC
TACAGATCTGGTGTTTCCCAAGATACCTGTCGACGACCATGTGGATGTGG
AGGCCCTTCCTAAGCCCCAGGACCGGGTGCCAACAACTCACGTGCACAAC
AATCCATCCGACTCGGGACCAAAGGGAATGCCTAGGAGCATGCAGCCCAG
TGAGCCACTGGTCGGGCCTACTATCCATCAGGGGCCAATGCCACCGGCCT
TGAATCATAACCAGCAGCCTCTGCCTACGAGGTTCCATCAATCACCTCCC
CATCAGTCACCTTCCCATCAGCCGCCTCCCCAGCTTCCTCAGGGATATCC
GGGACCAAGACCACATATGGCCCAAGGGCCTTGGCCGTGGGTGCACGGGA
TGCCAGCTGGTATGCAGCCCCATCACGCTCAACCAGGCATGCCTGTCTCT
ACGATGCCTGCGACTGCTATGCCCAATTCTGCAATGCCTGCTCCTGTCAT
GCCCGGTGCTGCGATGTCTGGCCAAGCCACAGTTCCGCACATGGTGGCTC
AACCGAATGGGCTGCGAGGCGTCCACATGGCGGCTGGGATGTTCCACCAA
CGGCAGGGATTTGATCCCCGCGCCCATTTCCCCGGCCAGCAAGAGACCCA
TCCTTCCGACAAAGCCCCTGCTCCTACCACTCCCCCGGCTCCTCCGGAGA
CTAAGCCCGAGAACGTCAGGCCCTCAACCCCAGCGGCAGATCCCGAGCTG
GAACTGGGACTAGAGTCGAGTAGTGTGGGGGACGATGAATCCGTGTTCGA
CTTTGACGACGACAGCTCCATCACCGATAGTTCCGATGAAGAGCCCGAAC
TGGAGGATAAACCCCAGCCGTGGCGCGGCAGTCTATATCGTCGACACTCT
GCTCCACGAGCTAAGCATGCGTACCGCACCCATTATCGGAAGCAGCCCCA
GAAGAACGGATCGGACAGCAAGGCCAGCCGGTCTGGGTATCCCAATGGCT
GCATTGACGTGGTGCCTGCGGACAGTAAGCATATCGACCCACGCAACGAG
GGTGCAGTCAGTGCTGGCGGTGGTGGTGGAAGTGGTCCCAGTCAAGAAGT
GAGCCGGCCGGCGCGGGACCGGCCCAAGATCATCCATGCGCCAGTTAGTA
CGGACGAGTTGGATTTGGAGCAACTTTTGGCCGAGAGGGCAGAGCGGTTC
CGAGGGGGGCGGGCCCGGAACGATATTCGGGCGCGAATACTGGATGATCG
TGAGGCCCGATTGGAGCATCGCGAGCGGATGGTGGAATACCGCGCCCGCG
TGCTTGAGGAACGGGAACGCTTGGACGATGCATGTTACCTCGGACGACGC
ATGTCCCTGCGCGAGCCGGGCACCTTCTATGGTCCTCGACGATATTACCT
CCCGGAGGGGCTTCAATGATGGTGCAGGGGTCCTTGGGGGTTAGCTACAT
AGTACTAGTCCGATTAGGGAGGAAAGAGGGGGGGAATGGAAGGGGAATCG
CTTCATTGTTTTTCCCTGGGAGAGTCAGTTTACCAGTGGATTTTCGGGTA
TTTGCATTTTGGGATCGGGTGAAGGAGGGATCGAAGTGGGTATCTCATAA
CGTCATGGGGGGGAAAGACAAAAGTTCCATCGGAAGCTGCAGTTCAACCG
CGCACACACACACAGACACACACTCCCTGAAGATTATTATCTCTCATCCT
TGTGCAATAGCAATGTTATATTATAGGGGGTTTGTCACGCGCCAAGTTAC
CCATTCCCAAAGGACACACCGAGTAGATGCTTCGTTATATAGACTAGTAG
AAGATGAGTAGAGAGATGGAGAGAATAAGAAAGAGAAAGAGGG back to topCoding sequence (CDS) from alignment at ch1:3060869..3064861+ >KJC3_001195-T1 ID=KJC3_001195-T1|Name=KJC3_001195-T1|organism=Aspergillus niger KJC3|type=CDS|length=1968bp|location=Sequence derived from alignment at ch1:3060869..3064861+ (Aspergillus niger KJC3)
ATGGCCGTCATCAACCAAAACAACAACAACAACAACCACAACCAGGTGCC
TCCTGCACCTCCAACCCACCATCCCCCTATGCGCCCGAATGAGGGCGTTC
GTGTGGCGCAAGCGGGCTCGCCACGTCCCATGAACTCGGAGTATTTGGTC
CATCAGATGCATCGGCTTAATGTTCAGCCGGAGAAGCCCCAGGCTGTCAA
CAATGCGAAGCCCAAGGAGACCACTGTCGTTGAGGAGATTGATGCTCGTG
CTCCCTTCTACTACCTGGGGTACACCTTCTTCAAGGCCGATGCCGTGCCC
GGGCACAAGTCCACCTGGAACCATGTGGAGCGGACCAAGATGAACCTCAG
CCAGTCCGATCTGATGAAGCTGGTGCACAAGCGAACCAAGAAGATTCCCA
TTGCGGAGCAATACCAGTCCCTGTCCAAGGTCAAGCGTGCGCATGTGGAT
CAGCTGATCAGCGAACTTAGGAAGAGTGATCCCCATTTTGAATGGACCTG
CGTCTATGTCAAGGAGGATGAGAAGCCATTCAAGGGTAAGAATTCCCGGC
GGGGTGACTATGAGACGCTCTCCGTGAACGTCGTCATTATGAGAAAGGCT
ACAGATCTGGTGTTTCCCAAGATACCTGTCGACGACCATGTGGATGTGGA
GGCCCTTCCTAAGCCCCAGGACCGGGTGCCAACAACTCACGTGCACAACA
ATCCATCCGACTCGGGACCAAAGGGAATGCCTAGGAGCATGCAGCCCAGT
GAGCCACTGGTCGGGCCTACTATCCATCAGGGGCCAATGCCACCGGCCTT
GAATCATAACCAGCAGCCTCTGCCTACGAGGTTCCATCAATCACCTCCCC
ATCAGTCACCTTCCCATCAGCCGCCTCCCCAGCTTCCTCAGGGATATCCG
GGACCAAGACCACATATGGCCCAAGGGCCTTGGCCGTGGGTGCACGGGAT
GCCAGCTGGTATGCAGCCCCATCACGCTCAACCAGGCATGCCTGTCTCTA
CGATGCCTGCGACTGCTATGCCCAATTCTGCAATGCCTGCTCCTGTCATG
CCCGGTGCTGCGATGTCTGGCCAAGCCACAGTTCCGCACATGGTGGCTCA
ACCGAATGGGCTGCGAGGCGTCCACATGGCGGCTGGGATGTTCCACCAAC
GGCAGGGATTTGATCCCCGCGCCCATTTCCCCGGCCAGCAAGAGACCCAT
CCTTCCGACAAAGCCCCTGCTCCTACCACTCCCCCGGCTCCTCCGGAGAC
TAAGCCCGAGAACGTCAGGCCCTCAACCCCAGCGGCAGATCCCGAGCTGG
AACTGGGACTAGAGTCGAGTAGTGTGGGGGACGATGAATCCGTGTTCGAC
TTTGACGACGACAGCTCCATCACCGATAGTTCCGATGAAGAGCCCGAACT
GGAGGATAAACCCCAGCCGTGGCGCGGCAGTCTATATCGTCGACACTCTG
CTCCACGAGCTAAGCATGCGTACCGCACCCATTATCGGAAGCAGCCCCAG
AAGAACGGATCGGACAGCAAGGCCAGCCGGTCTGGGTATCCCAATGGCTG
CATTGACGTGGTGCCTGCGGACAGTAAGCATATCGACCCACGCAACGAGG
GTGCAGTCAGTGCTGGCGGTGGTGGTGGAAGTGGTCCCAGTCAAGAAGTG
AGCCGGCCGGCGCGGGACCGGCCCAAGATCATCCATGCGCCAGTTAGTAC
GGACGAGTTGGATTTGGAGCAACTTTTGGCCGAGAGGGCAGAGCGGTTCC
GAGGGGGGCGGGCCCGGAACGATATTCGGGCGCGAATACTGGATGATCGT
GAGGCCCGATTGGAGCATCGCGAGCGGATGGTGGAATACCGCGCCCGCGT
GCTTGAGGAACGGGAACGCTTGGACGATGCATGTTACCTCGGACGACGCA
TGTCCCTGCGCGAGCCGGGCACCTTCTATGGTCCTCGACGATATTACCTC
CCGGAGGGGCTTCAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001195-T1.utr5p1 | KJC3_001195-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001195-T1.utr3p1 | KJC3_001195-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.14 |
| Note | antiSMASH:Cluster_1.13 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3060869..3064861 + |
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