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KJC3_001210-T1, KJC3_001210-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001210-T1
Unique NameKJC3_001210-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3099306..3101281+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001210-T1 ID=KJC3_001210-T1|Name=KJC3_001210-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1976bp|location=Sequence derived from alignment at ch1:3099306..3101281+ (Aspergillus niger KJC3)
CTCGTCGCTACTTTCTGCACGATGATGCCACTCCTTATCTCGTACCATTT
CCCAAGAGTCTCATATGATATGGCTTTCGGGACAAGCGCACTAATTCTAG
AGAGCCCTTCAGCACCGCTGTCTCGCCCTATCGTTCCACCTCGACTAAGC
AACTAACCCAAGTTTGACAAAGCGGACGGGCTGTTGACCGCTAGACGCAA
ATTCTTTCACACTGTGTACAAAGACCACCTCATCTGTTTCTGTACTCTCC
TCCCTCAGTCAGATTGAATTGGAGGCAAAATGCGATTGAATTTCAGTCAA
CCCCCGACACCGGCGTTGAGTCGGCAGAACACCACCTTCCTCAACAATGC
GCATCACTATCGCGCAGGGACGCATCCGCATCTCCTGACGAGTCGCAGCA
AGCCTCGAAGGTAAACCGATATCATCACTCATCAAATTACACCCTACTAT
AGCACCATGCTAAATACGCGCCATGTTAGATGGCCTTTGGTGTTCCGATT
CATTAAAGGCGCTATCCATGCGGCCATTCTGCTGCCCGTCTTCCTGCACG
CCGCGTTCACAGCCTTTGTGGTCTATCTCGATGTCTATGTATTTGATACG
GTTGGACTACCGAGCAGTATTGTAGGTCTCGCTCACATGGCATGCCGTTG
TGCTTCCCAATCTGATTATGCAACCGTAGATCCCATCCTTATCTATAGTC
GTGGGTTTGATGCTCGTTTTCCGCAACCAGACCTCCTACAACCGATTCTG
GGATGGGCGGAATGGAATGAACACGATCTATACGTGCATTCGAAATTTAG
TCAGGACTATCGTCACCAATGGCTACAGCACCGCGGGTCCTCCCACTGCC
GCAGAGAAAGAGGACATCGAGAGGACGATACGTATCCTCATGTCAATTCC
CTTTGCAGTCAAGAATCATCTTCGCGCTGAATGGGGAGCAGCCTGGGCTC
TCGGAAATGATGTAGCTGAGAACGGTGTCGCAGCTTTCAACCCCGATTAT
GCAAGTCTCCTTCCAGCTGGACTGGTGGGCCACGAAGATGAGGGGCTGGG
ATTACCGTTTCAACTAACCTTCTTTGTGGATGGATTTATCAAGAGGGGAG
TGGAGCGCGGCTGGTTCAATGCTCCTGGGGCAAGTCAAATGCAGGCTCAG
TTGAACTCTTTGATGGATGCCTATGGAAAAATGGAGACCATCAAGCTGAC
CCCTATTCCGGTTGCGCATTTGTAAGTTCCTTGTCTTGAAACGCCCCTTT
GACTATCCACGCCAGCTCACATGCGAAAGGATTCACCAAAAGCAAGTTCT
TGCTCTCTTTGGCTGCGTCTTACCCTTCGGTATGGTCGACGATATGGGGT
GGTGGACCGTTCCCATGGTCAGCCTGGTCATCTTCACCTTGTATGGCATC
GAAGGCATCGGCTCGCAATTGGAAGACCCCTTCGGGTACGACCGCAATGA
CATCAAGATGGATGCCATTGTCGGCGACGCTAAGACTGAAATTGACGTTG
TACTGGCTGAATGGCGCAGACTGATGGCGTCGCTCGAGTCAGCGACCGAT
AATGGCGATCAGCATCTCGGCAACGGTCTGGTTGTGGAGGAGGAGGTTAA
GGAGCCGAAATTCATGCCGCCTGATATGTTCCTCAAGCATCGTGCGAGAC
CATCAGGGCGATAAGTAGACTAGCTAGCTATTTCTGATTGTGATGGTTTT
CAGAAACTGGGCGTTGTGGAGATCCAGCAAATCTAGCGTCGCTAATAGGG
GACTATCACCTTAAGACTATCTCGGTTACTAGAGATCGACGCCCCTATCA
GCCTGTCAAGCATGCGAGTGATTATCTAGGAGGATATTTCCTTCAGTGCG
ATCGTCAGGGGATATCTCCATCGAGTAACTCGGATCATTGCTGGACCAAT
CCGACGTCGTCGAGATATCAAGTCTATAGTTTCTTTTTTTGTATCCCGAA
TAGCTCCACTTCCTTTGCATACCCTC
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Coding sequence (CDS) from alignment at ch1:3099306..3101281+

>KJC3_001210-T1 ID=KJC3_001210-T1|Name=KJC3_001210-T1|organism=Aspergillus niger KJC3|type=CDS|length=4800bp|location=Sequence derived from alignment at ch1:3099306..3101281+ (Aspergillus niger KJC3)
ATGCGATTGAATTTCAGTCAACCCCCGACACCGGCGTTGAGTCGGCAGAA
CACCACCTTCCTCAACAATGCGCATCACTATCGCGCAGGGACGCATCCGC
ATCTCCTGACGAGTCGCAGCAAGCCTCGAAGATGGCCTTTGGTGTTCCGA
TTCATTAAAGGCGCTATCCATGCGGCCATTCTGCTGCCCGTCTTCCTGCA
CGCCGCGTTCACAGCCTTTGTGGTCTATCTCGATGTCTATGTATTTGATA
CGGTTGGACTACCGAGCAGTATTATCCCATCCTTATCTATAGTCGTGGGT
TTGATGCTCGTTTTCCGCAACCAGACCTCCTACAACCGATTCTGGGATGG
GCGGAATGGAATGAACACGATCTATACGTGCATTCGAAATTTAGTCAGGA
CTATCGTCACCAATGGCTACAGCACCGCGGGTCCTCCCACTGCCGCAGAG
AAAGAGGACATCGAGAGGACGATACGTATCCTCATGTCAATTCCCTTTGC
AGTCAAGAATCATCTTCGCGCTGAATGGGGAGCAGCCTGGGCTCTCGGAA
ATGATGTAGCTGAGAACGGTGTCGCAGCTTTCAACCCCGATTATGCAAGT
CTCCTTCCAGCTGGACTGGTGGGCCACGAAGATGAGGGGCTGGGATTACC
GTTTCAACTAACCTTCTTTGTGGATGGATTTATCAAGAGGGGAGTGGAGC
GCGGCTGGTTCAATGCTCCTGGGGCAAGTCAAATGCAGGCTCAGTTGAAC
TCTTTGATGGATGCCTATGGAAAAATGGAGACCATCAAGCTGACCCCTAT
TCCGGTTGCGCATTTGATTCACCAAAAGCAAGTTCTTGCTCTCTTTGGCT
GCGTCTTACCCTTCGGTATGGTCGACGATATGGGGTGGTGGACCGTTCCC
ATGGTCAGCCTGGTCATCTTCACCTTGTATGGCATCGAAGGCATCGGCTC
GCAATTGGAAGACCCCTTCGGGTACGACCGCAATGACATCAAGATGGATG
CCATTGTCGGCGACGCTAAGACTGAAATTGACGTTGTACTGGCTGAATGG
CGCAGACTGATGGCGTCGCTCGAGTCAGCGACCGATAATGGCGATCAGCA
TCTCGGCAACGGTCTGGTTGTGGAGGAGGAGGTTAAGGAGCCGAAATTCA
TGCCGCCTGATATGTTCCTCAAGCATCGTGCGAGACCATCAGGGCGATAA
ATGCGATTGAATTTCAGTCAACCCCCGACACCGGCGTTGAGTCGGCAGAA
CACCACCTTCCTCAACAATGCGCATCACTATCGCGCAGGGACGCATCCGC
ATCTCCTGACGAGTCGCAGCAAGCCTCGAAGATGGCCTTTGGTGTTCCGA
TTCATTAAAGGCGCTATCCATGCGGCCATTCTGCTGCCCGTCTTCCTGCA
CGCCGCGTTCACAGCCTTTGTGGTCTATCTCGATGTCTATGTATTTGATA
CGGTTGGACTACCGAGCAGTATTATCCCATCCTTATCTATAGTCGTGGGT
TTGATGCTCGTTTTCCGCAACCAGACCTCCTACAACCGATTCTGGGATGG
GCGGAATGGAATGAACACGATCTATACGTGCATTCGAAATTTAGTCAGGA
CTATCGTCACCAATGGCTACAGCACCGCGGGTCCTCCCACTGCCGCAGAG
AAAGAGGACATCGAGAGGACGATACGTATCCTCATGTCAATTCCCTTTGC
AGTCAAGAATCATCTTCGCGCTGAATGGGGAGCAGCCTGGGCTCTCGGAA
ATGATGTAGCTGAGAACGGTGTCGCAGCTTTCAACCCCGATTATGCAAGT
CTCCTTCCAGCTGGACTGGTGGGCCACGAAGATGAGGGGCTGGGATTACC
GTTTCAACTAACCTTCTTTGTGGATGGATTTATCAAGAGGGGAGTGGAGC
GCGGCTGGTTCAATGCTCCTGGGGCAAGTCAAATGCAGGCTCAGTTGAAC
TCTTTGATGGATGCCTATGGAAAAATGGAGACCATCAAGCTGACCCCTAT
TCCGGTTGCGCATTTGATTCACCAAAAGCAAGTTCTTGCTCTCTTTGGCT
GCGTCTTACCCTTCGGTATGGTCGACGATATGGGGTGGTGGACCGTTCCC
ATGGTCAGCCTGGTCATCTTCACCTTGTATGGCATCGAAGGCATCGGCTC
GCAATTGGAAGACCCCTTCGGGTACGACCGCAATGACATCAAGATGGATG
CCATTGTCGGCGACGCTAAGACTGAAATTGACGTTGTACTGGCTGAATGG
CGCAGACTGATGGCGTCGCTCGAGTCAGCGACCGATAATGGCGATCAGCA
TCTCGGCAACGGTCTGGTTGTGGAGGAGGAGGTTAAGGAGCCGAAATTCA
TGCCGCCTGATATGTTCCTCAAGCATCGTGCGAGACCATCAGGGCGATAA
ATGCGATTGAATTTCAGTCAACCCCCGACACCGGCGTTGAGTCGGCAGAA
CACCACCTTCCTCAACAATGCGCATCACTATCGCGCAGGGACGCATCCGC
ATCTCCTGACGAGTCGCAGCAAGCCTCGAAGATGGCCTTTGGTGTTCCGA
TTCATTAAAGGCGCTATCCATGCGGCCATTCTGCTGCCCGTCTTCCTGCA
CGCCGCGTTCACAGCCTTTGTGGTCTATCTCGATGTCTATGTATTTGATA
CGGTTGGACTACCGAGCAGTATTATCCCATCCTTATCTATAGTCGTGGGT
TTGATGCTCGTTTTCCGCAACCAGACCTCCTACAACCGATTCTGGGATGG
GCGGAATGGAATGAACACGATCTATACGTGCATTCGAAATTTAGTCAGGA
CTATCGTCACCAATGGCTACAGCACCGCGGGTCCTCCCACTGCCGCAGAG
AAAGAGGACATCGAGAGGACGATACGTATCCTCATGTCAATTCCCTTTGC
AGTCAAGAATCATCTTCGCGCTGAATGGGGAGCAGCCTGGGCTCTCGGAA
ATGATGTAGCTGAGAACGGTGTCGCAGCTTTCAACCCCGATTATGCAAGT
CTCCTTCCAGCTGGACTGGTGGGCCACGAAGATGAGGGGCTGGGATTACC
GTTTCAACTAACCTTCTTTGTGGATGGATTTATCAAGAGGGGAGTGGAGC
GCGGCTGGTTCAATGCTCCTGGGGCAAGTCAAATGCAGGCTCAGTTGAAC
TCTTTGATGGATGCCTATGGAAAAATGGAGACCATCAAGCTGACCCCTAT
TCCGGTTGCGCATTTGATTCACCAAAAGCAAGTTCTTGCTCTCTTTGGCT
GCGTCTTACCCTTCGGTATGGTCGACGATATGGGGTGGTGGACCGTTCCC
ATGGTCAGCCTGGTCATCTTCACCTTGTATGGCATCGAAGGCATCGGCTC
GCAATTGGAAGACCCCTTCGGGTACGACCGCAATGACATCAAGATGGATG
CCATTGTCGGCGACGCTAAGACTGAAATTGACGTTGTACTGGCTGAATGG
CGCAGACTGATGGCGTCGCTCGAGTCAGCGACCGATAATGGCGATCAGCA
TCTCGGCAACGGTCTGGTTGTGGAGGAGGAGGTTAAGGAGCCGAAATTCA
TGCCGCCTGATATGTTCCTCAAGCATCGTGCGAGACCATCAGGGCGATAA
ATGCGATTGAATTTCAGTCAACCCCCGACACCGGCGTTGAGTCGGCAGAA
CACCACCTTCCTCAACAATGCGCATCACTATCGCGCAGGGACGCATCCGC
ATCTCCTGACGAGTCGCAGCAAGCCTCGAAGATGGCCTTTGGTGTTCCGA
TTCATTAAAGGCGCTATCCATGCGGCCATTCTGCTGCCCGTCTTCCTGCA
CGCCGCGTTCACAGCCTTTGTGGTCTATCTCGATGTCTATGTATTTGATA
CGGTTGGACTACCGAGCAGTATTATCCCATCCTTATCTATAGTCGTGGGT
TTGATGCTCGTTTTCCGCAACCAGACCTCCTACAACCGATTCTGGGATGG
GCGGAATGGAATGAACACGATCTATACGTGCATTCGAAATTTAGTCAGGA
CTATCGTCACCAATGGCTACAGCACCGCGGGTCCTCCCACTGCCGCAGAG
AAAGAGGACATCGAGAGGACGATACGTATCCTCATGTCAATTCCCTTTGC
AGTCAAGAATCATCTTCGCGCTGAATGGGGAGCAGCCTGGGCTCTCGGAA
ATGATGTAGCTGAGAACGGTGTCGCAGCTTTCAACCCCGATTATGCAAGT
CTCCTTCCAGCTGGACTGGTGGGCCACGAAGATGAGGGGCTGGGATTACC
GTTTCAACTAACCTTCTTTGTGGATGGATTTATCAAGAGGGGAGTGGAGC
GCGGCTGGTTCAATGCTCCTGGGGCAAGTCAAATGCAGGCTCAGTTGAAC
TCTTTGATGGATGCCTATGGAAAAATGGAGACCATCAAGCTGACCCCTAT
TCCGGTTGCGCATTTGATTCACCAAAAGCAAGTTCTTGCTCTCTTTGGCT
GCGTCTTACCCTTCGGTATGGTCGACGATATGGGGTGGTGGACCGTTCCC
ATGGTCAGCCTGGTCATCTTCACCTTGTATGGCATCGAAGGCATCGGCTC
GCAATTGGAAGACCCCTTCGGGTACGACCGCAATGACATCAAGATGGATG
CCATTGTCGGCGACGCTAAGACTGAAATTGACGTTGTACTGGCTGAATGG
CGCAGACTGATGGCGTCGCTCGAGTCAGCGACCGATAATGGCGATCAGCA
TCTCGGCAACGGTCTGGTTGTGGAGGAGGAGGTTAAGGAGCCGAAATTCA
TGCCGCCTGATATGTTCCTCAAGCATCGTGCGAGACCATCAGGGCGATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001210KJC3_001210Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001210-T1KJC3_001210-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001210-T1.utr5p1KJC3_001210-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001210-T1.exon1KJC3_001210-T1.exon1Aspergillus niger KJC3exon
KJC3_001210-T1.exon2KJC3_001210-T1.exon2Aspergillus niger KJC3exon
KJC3_001210-T1.exon3KJC3_001210-T1.exon3Aspergillus niger KJC3exon
KJC3_001210-T1.exon4KJC3_001210-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001210-T1.cdsKJC3_001210-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001210-T1.utr3p1KJC3_001210-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021134
DBxrefPFAM:PF01062
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3099306..3101281 +
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