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KJC3_001226-T1, KJC3_001226-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001226-T1
Unique NameKJC3_001226-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3141240..3142790-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001226-T1 ID=KJC3_001226-T1|Name=KJC3_001226-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1551bp|location=Sequence derived from alignment at ch1:3141240..3142790- (Aspergillus niger KJC3)
TGCGCCTCTTCGACACGTTCTCTGGCATCTGGTCTTATTTGCTGTATTTT
TTTGTTTGTCAGAAGATCAACTATCACGCTCCTCAACGCAGAAGTGTGGG
GGAAAGACCTTTGACCACCTCCAATCCACACCCCACCGTATTACCAAAGT
CACTCCAGATTTGAGCGATCCAGCACCCTGACAACATCTCTCTCGACCGT
TCCCGCTTCAAGCCAAAGTAGACTTTTACAGCTATAGATATCGAACTGTG
AAACCGTATTTCTCTTGCGCCATTCACCATGGAGACCCTCAAAGCAGTCT
TTTTCGGCCCGGATCCTCAAACACAGGCAAGTGCCGATTTTGTCCAGCCA
CAATGTCTGGCGCTTCTGACCGTGATTGCTGTCTCTAGATGAGAAAATGT
AACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCGTGACATCGCACA
ACTGAAGACTCTGGAAAGCAAGACACGACAATACATTATGAATTCGTCGA
AGCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCCAACATGGAGGCC
AAGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCAGTCTACCCGGTT
ACATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGCAGGTCAATGAGG
CCTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAATCGACGGGGATT
ATGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCTGAATGCCACGAT
GCGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCATCGAGGAGATGG
TCGATGACGCCATTCCTAACAACGAGTTACTGGAGGAAGAGGAAGAGGAA
GCAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCTCCATGGCAAGTT
GTCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGGAAGAGGCTCCGG
AGCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTAGAGCAGATGCGA
GGACGGCTCGAAGCCTTGAAGAGCTGAGGAACAATGAAGACGTTTGCGTG
CATCTGCATCTTCGGGCCTATGTGACAATGGATAATGAGTCACAATATGC
CGTTGAATATGGGTTGCTTTCCTTTCATGTTATGAACGGCGTTTGGGTAG
GATGGCGGGAGTCTTTGGGATGATCTTAAGTATCGAATGAGCTCATTTCG
TCCTAATGTTGACTACGGGACTGGCCTTAACTGGAAACCTTGAGCGGATT
GAGCTGTTTCTGTTGATTTGAAGAATTTCCCCGATAATATCCCTGCTCGT
AAATATATATGATCATGTTTCCTTCTACGCAATTTTGGGCTGGCACTGGG
CTTGATTGCTTCGGTTGAGTCTTTGGGCAGCAGGGACTCTTGGCGCAGCG
GAAGGTTACAGATCACCGCGAGCTTATTGAGTCTGGACTCATGTGTCGAA
ATGAATATACGAGATTAGATTGCATAGCTAGGTAGCGTTGTTACATTAGC
TTGAAGTAAGCTGGACTGTAGTTGAAGCCATGATCTGCTTGGGCACCGGC
C
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Coding sequence (CDS) from alignment at ch1:3141240..3142790-

>KJC3_001226-T1 ID=KJC3_001226-T1|Name=KJC3_001226-T1|organism=Aspergillus niger KJC3|type=CDS|length=1374bp|location=Sequence derived from alignment at ch1:3141240..3142790- (Aspergillus niger KJC3)
ATGAGAAAATGTAACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCG
TGACATCGCACAACTGAAGACTCTGGAAAGCAAGACACGACAATACATTA
TGAATTCGTCGAAGCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCC
AACATGGAGGCCAAGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCA
GTCTACCCGGTTACATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGC
AGGTCAATGAGGCCTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAA
TCGACGGGGATTATGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCT
GAATGCCACGATGCGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCA
TCGAGGAGATGGTCGATGACGCCATTCCTAACAACGAGTTACTGGAGGAA
GAGGAAGAGGAAGCAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCT
CCATGGCAAGTTGTCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGG
AAGAGGCTCCGGAGCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTA
GAGCAGATGCGAGGACGGCTCGAAGCCTTGAAGAGCTGAATGGAGACCCT
CAAAGCAGTCTTTTTCGGCCCGGATCCTCAAACACAGATGAGAAAATGTA
ACCAGCTCATCCGCGCCAATACCCGACAGTTGGATCGTGACATCGCACAA
CTGAAGACTCTGGAAAGCAAGACACGACAATACATTATGAATTCGTCGAA
GCGGGCCCAACGCAATCCCTCCCAGGCCAAGCAGGCCAACATGGAGGCCA
AGACCTTTGCACGAGAGCTTGTTCGCATTCGCAAGCAGTCTACCCGGTTA
CATACCAGTCGCGCGCAACTGCAGAGTGTTCAGATGCAGGTCAATGAGGC
CTTCTCGGTTCGGAAGATTCAGGGCAGCTTGAAGAAATCGACGGGGATTA
TGAAGGACGTCAACACATTGGTCCGGATGCCCGAGCTGAATGCCACGATG
CGTCAGCTTTCGACGGAACTGGTGCGGGCCGGGATCATCGAGGAGATGGT
CGATGACGCCATTCCTAACAACGAGTTACTGGAGGAAGAGGAAGAGGAAG
CAGAGGAGGAGGTCGACAAGGTCCTGCAGGAGATCCTCCATGGCAAGTTG
TCTCAGGTCGAAGGGGTCCAGCCCGAGAAGCCATTGGAAGAGGCTCCGGA
GCCAGAGGACGAGTTCGCGGATCAAGAAGCGACACTAGAGCAGATGCGAG
GACGGCTCGAAGCCTTGAAGAGCTGAATGGAGACCCTCAAAGCAGTCTTT
TTCGGCCCGGATCCTCAAACACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001226KJC3_001226Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001226-T1KJC3_001226-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001226-T1.cdsKJC3_001226-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001226-T1.utr3p1KJC3_001226-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001226-T1.exon2KJC3_001226-T1.exon2Aspergillus niger KJC3exon
KJC3_001226-T1.exon1KJC3_001226-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001226-T1.utr5p1KJC3_001226-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926510L
DBxrefInterPro:IPR005024
DBxrefPFAM:PF03357
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3141240..3142790 -
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