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KJC3_001236-T1, KJC3_001236-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001236-T1
Unique NameKJC3_001236-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3167974..3169385-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001236-T1 ID=KJC3_001236-T1|Name=KJC3_001236-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1412bp|location=Sequence derived from alignment at ch1:3167974..3169385- (Aspergillus niger KJC3)
AATAGCTCTTAATACCCCATCAGGCAATTGACTTCACTCTTCTCTTCTCT
TACAAGCTATATACTTCCTAATTCCAAAGTCTAGACTTCAATTCCAACCA
CGGCTACACCCCCATCCCTTGATTACTGATCGCATCGCGGATTTCTAATC
TCGGCATGACAAGAACCCCGACTGGAATGACGCCATGAAAACCTCCTCAT
TTACTATATAGTCCCATTTCGACCCCTCATTTTCCATAAACATCCCAAAA
TTAGTTCTTCTCTTGCTTCAAAGCAAACTCTCCAATAATCAAAATGGCCT
CCAAACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCACTGTACGTACA
TCTTCCCCCCTCCTTCCCACCACCAACTCCCATACTATATCAACCATATC
CATCCGTTGAAACAAAACCCAAACAAACAACTAATAAATGAGAAGGGCGC
CTCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATCGTAGTCCTAGCCC
GCAACCCAGCAAACTATCAGCCCGTCGTGGACGAGATCAACTCCTCCGGC
GGTCAAGCCACCGGCATCAGCACCGATTTATCCGACTCGACTGGTGTCCG
CTCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGTTCATCACTAGCAG
CCGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAAGCCGTTTCTTGAG
TTAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGCAGGGGTATGATGC
TACTACCTTCATTCCCCTCTCTAATCTTTTAACTGGGTATGGTATGCTAA
TGTGGTGATATAGGAAAGGAGCATTCAACTTCGCACAGAATGTCCTCCCA
CTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATACCCACCTACTCTCAT
TTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTCGCTTCCT
TTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTTGGCGAGA
GAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGTTATTATTGATGGGGT
TATTGATATCCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAGGATGCCA
AGTTGGATCCTGAGGCTGTAAGTTATCTCATTTTCCTTTCGCTGTTTGGT
TGCTTGTTTTGGGGGTGAGATGCTGATGTTGCATAGATTGCCGATTCGTA
TTGGCATTTACATACGCAGCCCAGGACGACGTTTGGGTTTGAGTTGGATT
TGAGACCGTATGTTGAGAGGTGGTGATTGAGAAGATTGGAAAATAGGGAG
AGTAGTATCATTGGGAGTAGTATTCCAATTTTGATTGTTCAAGGATGTGA
AATTGCACAGGGTACGGAGTAGTATCTAAGTGGACTACAATATCGATTCC
ACAGTCCCAAAG
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Coding sequence (CDS) from alignment at ch1:3167974..3169385-

>KJC3_001236-T1 ID=KJC3_001236-T1|Name=KJC3_001236-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch1:3167974..3169385- (Aspergillus niger KJC3)
ATTGCCGATTCGTATTGGCATTTACATACGCAGCCCAGGACGACGTTTGG
GTTTGAGTTGGATTTGAGACCGTATGTTGAGAGGTGGTGAGAAAGGAGCA
TTCAACTTCGCACAGAATGTCCTCCCACTTTTCCCGGCTGAGTCGCAAGG
AGGTTTGAAATACCCACCTACTCTCATTTTCACCGGCGCTACAGCCAGCG
TGAAGGGCTCGGCGCAATTCGCTTCCTTTGCTGCGGGCAAGTTCGCGCTT
AGGGCGTTGGCGCAGTCGTTGGCGAGAGAGTTCGGGCCTAAGGGCATTCA
TGTCTCCCATGTTATTATTGATGGGGTTATTGATATCCCGAGGACGAAGG
GGTGGGTGTTCGAGAAGGAGGATGCCAAGTTGGATCCTGAGGCTGGCGCC
TCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATCGTAGTCCTAGCCCG
CAACCCAGCAAACTATCAGCCCGTCGTGGACGAGATCAACTCCTCCGGCG
GTCAAGCCACCGGCATCAGCACCGATTTATCCGACTCGACTGGTGTCCGC
TCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGTTCATCACTAGCAGC
CGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAAGCCGTTTCTTGAGT
TAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGCAGGGATGGCCTCCA
AACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCACTATTGCCGATTCG
TATTGGCATTTACATACGCAGCCCAGGACGACGTTTGGGTTTGAGTTGGA
TTTGAGACCGTATGTTGAGAGGTGGTGAGAAAGGAGCATTCAACTTCGCA
CAGAATGTCCTCCCACTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATA
CCCACCTACTCTCATTTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGG
CGCAATTCGCTTCCTTTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCG
CAGTCGTTGGCGAGAGAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGT
TATTATTGATGGGGTTATTGATATCCCGAGGACGAAGGGGTGGGTGTTCG
AGAAGGAGGATGCCAAGTTGGATCCTGAGGCTGGCGCCTCCATCGCCCGC
CGCTTCGCCAAATCCTACCCCATCGTAGTCCTAGCCCGCAACCCAGCAAA
CTATCAGCCCGTCGTGGACGAGATCAACTCCTCCGGCGGTCAAGCCACCG
GCATCAGCACCGATTTATCCGACTCGACTGGTGTCCGCTCCGCCTTTGAG
CAGATCAAATCGCAGTTCCAGGGTTCATCACTAGCAGCCGCAGTGTTTAA
CTCGGGCGGTGGATTCGTGAGGAAGCCGTTTCTTGAGTTAACGGAGACGG
AGTTTAGTTCCGGGTTTGAGGGGCAGGGATGGCCTCCAAACCCTTCGCTA
TCATCGCCGGCGTCGGCCCAGGCACTATTGCCGATTCGTATTGGCATTTA
CATACGCAGCCCAGGACGACGTTTGGGTTTGAGTTGGATTTGAGACCGTA
TGTTGAGAGGTGGTGAGAAAGGAGCATTCAACTTCGCACAGAATGTCCTC
CCACTTTTCCCGGCTGAGTCGCAAGGAGGTTTGAAATACCCACCTACTCT
CATTTTCACCGGCGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTCGCTT
CCTTTGCTGCGGGCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTTGGCG
AGAGAGTTCGGGCCTAAGGGCATTCATGTCTCCCATGTTATTATTGATGG
GGTTATTGATATCCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAGGATG
CCAAGTTGGATCCTGAGGCTGGCGCCTCCATCGCCCGCCGCTTCGCCAAA
TCCTACCCCATCGTAGTCCTAGCCCGCAACCCAGCAAACTATCAGCCCGT
CGTGGACGAGATCAACTCCTCCGGCGGTCAAGCCACCGGCATCAGCACCG
ATTTATCCGACTCGACTGGTGTCCGCTCCGCCTTTGAGCAGATCAAATCG
CAGTTCCAGGGTTCATCACTAGCAGCCGCAGTGTTTAACTCGGGCGGTGG
ATTCGTGAGGAAGCCGTTTCTTGAGTTAACGGAGACGGAGTTTAGTTCCG
GGTTTGAGGGGCAGGGATGGCCTCCAAACCCTTCGCTATCATCGCCGGCG
TCGGCCCAGGCACTATTGCCGATTCGTATTGGCATTTACATACGCAGCCC
AGGACGACGTTTGGGTTTGAGTTGGATTTGAGACCGTATGTTGAGAGGTG
GTGAGAAAGGAGCATTCAACTTCGCACAGAATGTCCTCCCACTTTTCCCG
GCTGAGTCGCAAGGAGGTTTGAAATACCCACCTACTCTCATTTTCACCGG
CGCTACAGCCAGCGTGAAGGGCTCGGCGCAATTCGCTTCCTTTGCTGCGG
GCAAGTTCGCGCTTAGGGCGTTGGCGCAGTCGTTGGCGAGAGAGTTCGGG
CCTAAGGGCATTCATGTCTCCCATGTTATTATTGATGGGGTTATTGATAT
CCCGAGGACGAAGGGGTGGGTGTTCGAGAAGGAGGATGCCAAGTTGGATC
CTGAGGCTGGCGCCTCCATCGCCCGCCGCTTCGCCAAATCCTACCCCATC
GTAGTCCTAGCCCGCAACCCAGCAAACTATCAGCCCGTCGTGGACGAGAT
CAACTCCTCCGGCGGTCAAGCCACCGGCATCAGCACCGATTTATCCGACT
CGACTGGTGTCCGCTCCGCCTTTGAGCAGATCAAATCGCAGTTCCAGGGT
TCATCACTAGCAGCCGCAGTGTTTAACTCGGGCGGTGGATTCGTGAGGAA
GCCGTTTCTTGAGTTAACGGAGACGGAGTTTAGTTCCGGGTTTGAGGGGC
AGGGATGGCCTCCAAACCCTTCGCTATCATCGCCGGCGTCGGCCCAGGCA
CT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001236KJC3_001236Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001236-T1KJC3_001236-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001236-T1.cdsKJC3_001236-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001236-T1.utr3p1KJC3_001236-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001236-T1.exon4KJC3_001236-T1.exon4Aspergillus niger KJC3exon
KJC3_001236-T1.exon3KJC3_001236-T1.exon3Aspergillus niger KJC3exon
KJC3_001236-T1.exon2KJC3_001236-T1.exon2Aspergillus niger KJC3exon
KJC3_001236-T1.exon1KJC3_001236-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001236-T1.utr5p1KJC3_001236-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3167974..3169385 -
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