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KJC3_001249-T1, KJC3_001249-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001249-T1
Unique NameKJC3_001249-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3199058..3200313+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001249-T1 ID=KJC3_001249-T1|Name=KJC3_001249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch1:3199058..3200313+ (Aspergillus niger KJC3)
CATGCGCTCGCCGTGACGTCATGGCATCGTTGCTTCGCCTGTGCTTCGCC
TCCATTCTTCGCCAGTCGCAACGATCACTGTCTTACTGTTGGCTGTCTGT
CGCTGGCACAATGCCACTTCATCATCGCGATGCCTACTAAACGTGCAAGG
AAAAATCCATCGGTGGCACAGAAACCGCCTTCCCCTCCGCTGTCCGAGAA
GAATGCCGTCATCACGCAAGATATCCCAGAGGAAGAGGGAGCAAAGCGAG
AATCTACCCTTCGAGATGAGTCGTACACACCTGAGCTATTCGACGAAGAC
GAGGAGATGCCCGAAGAAACGGAGAATACTATCGACCCCGACACTGGGAA
AGCAGCCAAAAGAACGGCGGAATACGCACTAGGAGGGGGAGGGTACAACG
CACTCAAGTCGTACAAAGGACAGATGTACTCCGGAATGGCTGTTGGAGGA
TCGCACACCTGGACATACGACCAAGGGACGTGGAAGGAAACCAAGGAAGA
ACCCGATCTCTGGAGAATCGACTACCAGACGAACAAAAGACGAGCGAGGA
AAGCGCCTACAGGGAGTGGTGCGCCAGTGGGAACCGAGTATCACTGGCTG
ATTGTAGGCCATCAGGTAGGCTACGCCACTTCATCAGACGACGGCTGGCT
CACCCCCACAGCATGTGAAGAAAATCGATGCCAATACGTACGAGACGCAC
CTCACAGGCTCGAAGTATAAACTGGCGTACAAGTCCGCGTCATCGAACGC
TTGGTCGATTCCGACAGTCAAGAAGCAACGGGAGCGGGAAGTCGAATTGC
TGGATGACGCCAAACAACGCGTCCAGGGACTGCCGCCTGTGCTGGCATCA
GAGAAGGTCAAGGTTGAGAAACGCGAAAAGGGCCAGCAAAGACTCGACAG
CATGTTTGGAAAGGCTGCAGGCGTAAAACGAAAGGCGGATGAAAATGCCT
GATACGCGTTGCTTCCGACAAATGCTACGTGACTAGGCCATGTCACGTCT
GCTTCGGCATACAATCTACGGCAATCATTCGGATTTACGGGTCGAAAAAT
GAGATATGATAATCGATCCATGAAGATATTATGGACATAAGCTAAAACTG
GCTCGGGCGTATTCCGGGCCATATTTTGCAAAAGTTTTTACTGTGAGGCT
ATTCAGCAGGGTCAAAGCAACAATCTAGATCCTGCATGATAAAACTGCAA
GACCGACGCTATGTAGCATAGCAACGGAGTCGAGAACGTAAGACAATTGG
ATAGGG
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Coding sequence (CDS) from alignment at ch1:3199058..3200313+

>KJC3_001249-T1 ID=KJC3_001249-T1|Name=KJC3_001249-T1|organism=Aspergillus niger KJC3|type=CDS|length=1554bp|location=Sequence derived from alignment at ch1:3199058..3200313+ (Aspergillus niger KJC3)
ATGCCTACTAAACGTGCAAGGAAAAATCCATCGGTGGCACAGAAACCGCC
TTCCCCTCCGCTGTCCGAGAAGAATGCCGTCATCACGCAAGATATCCCAG
AGGAAGAGGGAGCAAAGCGAGAATCTACCCTTCGAGATGAGTCGTACACA
CCTGAGCTATTCGACGAAGACGAGGAGATGCCCGAAGAAACGGAGAATAC
TATCGACCCCGACACTGGGAAAGCAGCCAAAAGAACGGCGGAATACGCAC
TAGGAGGGGGAGGGTACAACGCACTCAAGTCGTACAAAGGACAGATGTAC
TCCGGAATGGCTGTTGGAGGATCGCACACCTGGACATACGACCAAGGGAC
GTGGAAGGAAACCAAGGAAGAACCCGATCTCTGGAGAATCGACTACCAGA
CGAACAAAAGACGAGCGAGGAAAGCGCCTACAGGGAGTGGTGCGCCAGTG
GGAACCGAGTATCACTGGCTGATTGTAGGCCATCAGCATGTGAAGAAAAT
CGATGCCAATACGTACGAGACGCACCTCACAGGCTCGAAGTATAAACTGG
CGTACAAGTCCGCGTCATCGAACGCTTGGTCGATTCCGACAGTCAAGAAG
CAACGGGAGCGGGAAGTCGAATTGCTGGATGACGCCAAACAACGCGTCCA
GGGACTGCCGCCTGTGCTGGCATCAGAGAAGGTCAAGGTTGAGAAACGCG
AAAAGGGCCAGCAAAGACTCGACAGCATGTTTGGAAAGGCTGCAGGCGTA
AAACGAAAGGCGGATGAAAATGCCTGAATGCCTACTAAACGTGCAAGGAA
AAATCCATCGGTGGCACAGAAACCGCCTTCCCCTCCGCTGTCCGAGAAGA
ATGCCGTCATCACGCAAGATATCCCAGAGGAAGAGGGAGCAAAGCGAGAA
TCTACCCTTCGAGATGAGTCGTACACACCTGAGCTATTCGACGAAGACGA
GGAGATGCCCGAAGAAACGGAGAATACTATCGACCCCGACACTGGGAAAG
CAGCCAAAAGAACGGCGGAATACGCACTAGGAGGGGGAGGGTACAACGCA
CTCAAGTCGTACAAAGGACAGATGTACTCCGGAATGGCTGTTGGAGGATC
GCACACCTGGACATACGACCAAGGGACGTGGAAGGAAACCAAGGAAGAAC
CCGATCTCTGGAGAATCGACTACCAGACGAACAAAAGACGAGCGAGGAAA
GCGCCTACAGGGAGTGGTGCGCCAGTGGGAACCGAGTATCACTGGCTGAT
TGTAGGCCATCAGCATGTGAAGAAAATCGATGCCAATACGTACGAGACGC
ACCTCACAGGCTCGAAGTATAAACTGGCGTACAAGTCCGCGTCATCGAAC
GCTTGGTCGATTCCGACAGTCAAGAAGCAACGGGAGCGGGAAGTCGAATT
GCTGGATGACGCCAAACAACGCGTCCAGGGACTGCCGCCTGTGCTGGCAT
CAGAGAAGGTCAAGGTTGAGAAACGCGAAAAGGGCCAGCAAAGACTCGAC
AGCATGTTTGGAAAGGCTGCAGGCGTAAAACGAAAGGCGGATGAAAATGC
CTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001249KJC3_001249Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001249-T1.utr5p1KJC3_001249-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001249-T1.exon1KJC3_001249-T1.exon1Aspergillus niger KJC3exon
KJC3_001249-T1.exon2KJC3_001249-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001249-T1.cdsKJC3_001249-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001249-T1.utr3p1KJC3_001249-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001249-T1KJC3_001249-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3199058..3200313 +
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