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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3199058..3200313+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001249-T1 ID=KJC3_001249-T1|Name=KJC3_001249-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1256bp|location=Sequence derived from alignment at ch1:3199058..3200313+ (Aspergillus niger KJC3)
CATGCGCTCGCCGTGACGTCATGGCATCGTTGCTTCGCCTGTGCTTCGCC
TCCATTCTTCGCCAGTCGCAACGATCACTGTCTTACTGTTGGCTGTCTGT
CGCTGGCACAATGCCACTTCATCATCGCGATGCCTACTAAACGTGCAAGG
AAAAATCCATCGGTGGCACAGAAACCGCCTTCCCCTCCGCTGTCCGAGAA
GAATGCCGTCATCACGCAAGATATCCCAGAGGAAGAGGGAGCAAAGCGAG
AATCTACCCTTCGAGATGAGTCGTACACACCTGAGCTATTCGACGAAGAC
GAGGAGATGCCCGAAGAAACGGAGAATACTATCGACCCCGACACTGGGAA
AGCAGCCAAAAGAACGGCGGAATACGCACTAGGAGGGGGAGGGTACAACG
CACTCAAGTCGTACAAAGGACAGATGTACTCCGGAATGGCTGTTGGAGGA
TCGCACACCTGGACATACGACCAAGGGACGTGGAAGGAAACCAAGGAAGA
ACCCGATCTCTGGAGAATCGACTACCAGACGAACAAAAGACGAGCGAGGA
AAGCGCCTACAGGGAGTGGTGCGCCAGTGGGAACCGAGTATCACTGGCTG
ATTGTAGGCCATCAGGTAGGCTACGCCACTTCATCAGACGACGGCTGGCT
CACCCCCACAGCATGTGAAGAAAATCGATGCCAATACGTACGAGACGCAC
CTCACAGGCTCGAAGTATAAACTGGCGTACAAGTCCGCGTCATCGAACGC
TTGGTCGATTCCGACAGTCAAGAAGCAACGGGAGCGGGAAGTCGAATTGC
TGGATGACGCCAAACAACGCGTCCAGGGACTGCCGCCTGTGCTGGCATCA
GAGAAGGTCAAGGTTGAGAAACGCGAAAAGGGCCAGCAAAGACTCGACAG
CATGTTTGGAAAGGCTGCAGGCGTAAAACGAAAGGCGGATGAAAATGCCT
GATACGCGTTGCTTCCGACAAATGCTACGTGACTAGGCCATGTCACGTCT
GCTTCGGCATACAATCTACGGCAATCATTCGGATTTACGGGTCGAAAAAT
GAGATATGATAATCGATCCATGAAGATATTATGGACATAAGCTAAAACTG
GCTCGGGCGTATTCCGGGCCATATTTTGCAAAAGTTTTTACTGTGAGGCT
ATTCAGCAGGGTCAAAGCAACAATCTAGATCCTGCATGATAAAACTGCAA
GACCGACGCTATGTAGCATAGCAACGGAGTCGAGAACGTAAGACAATTGG
ATAGGG back to topCoding sequence (CDS) from alignment at ch1:3199058..3200313+ >KJC3_001249-T1 ID=KJC3_001249-T1|Name=KJC3_001249-T1|organism=Aspergillus niger KJC3|type=CDS|length=1554bp|location=Sequence derived from alignment at ch1:3199058..3200313+ (Aspergillus niger KJC3)
ATGCCTACTAAACGTGCAAGGAAAAATCCATCGGTGGCACAGAAACCGCC
TTCCCCTCCGCTGTCCGAGAAGAATGCCGTCATCACGCAAGATATCCCAG
AGGAAGAGGGAGCAAAGCGAGAATCTACCCTTCGAGATGAGTCGTACACA
CCTGAGCTATTCGACGAAGACGAGGAGATGCCCGAAGAAACGGAGAATAC
TATCGACCCCGACACTGGGAAAGCAGCCAAAAGAACGGCGGAATACGCAC
TAGGAGGGGGAGGGTACAACGCACTCAAGTCGTACAAAGGACAGATGTAC
TCCGGAATGGCTGTTGGAGGATCGCACACCTGGACATACGACCAAGGGAC
GTGGAAGGAAACCAAGGAAGAACCCGATCTCTGGAGAATCGACTACCAGA
CGAACAAAAGACGAGCGAGGAAAGCGCCTACAGGGAGTGGTGCGCCAGTG
GGAACCGAGTATCACTGGCTGATTGTAGGCCATCAGCATGTGAAGAAAAT
CGATGCCAATACGTACGAGACGCACCTCACAGGCTCGAAGTATAAACTGG
CGTACAAGTCCGCGTCATCGAACGCTTGGTCGATTCCGACAGTCAAGAAG
CAACGGGAGCGGGAAGTCGAATTGCTGGATGACGCCAAACAACGCGTCCA
GGGACTGCCGCCTGTGCTGGCATCAGAGAAGGTCAAGGTTGAGAAACGCG
AAAAGGGCCAGCAAAGACTCGACAGCATGTTTGGAAAGGCTGCAGGCGTA
AAACGAAAGGCGGATGAAAATGCCTGAATGCCTACTAAACGTGCAAGGAA
AAATCCATCGGTGGCACAGAAACCGCCTTCCCCTCCGCTGTCCGAGAAGA
ATGCCGTCATCACGCAAGATATCCCAGAGGAAGAGGGAGCAAAGCGAGAA
TCTACCCTTCGAGATGAGTCGTACACACCTGAGCTATTCGACGAAGACGA
GGAGATGCCCGAAGAAACGGAGAATACTATCGACCCCGACACTGGGAAAG
CAGCCAAAAGAACGGCGGAATACGCACTAGGAGGGGGAGGGTACAACGCA
CTCAAGTCGTACAAAGGACAGATGTACTCCGGAATGGCTGTTGGAGGATC
GCACACCTGGACATACGACCAAGGGACGTGGAAGGAAACCAAGGAAGAAC
CCGATCTCTGGAGAATCGACTACCAGACGAACAAAAGACGAGCGAGGAAA
GCGCCTACAGGGAGTGGTGCGCCAGTGGGAACCGAGTATCACTGGCTGAT
TGTAGGCCATCAGCATGTGAAGAAAATCGATGCCAATACGTACGAGACGC
ACCTCACAGGCTCGAAGTATAAACTGGCGTACAAGTCCGCGTCATCGAAC
GCTTGGTCGATTCCGACAGTCAAGAAGCAACGGGAGCGGGAAGTCGAATT
GCTGGATGACGCCAAACAACGCGTCCAGGGACTGCCGCCTGTGCTGGCAT
CAGAGAAGGTCAAGGTTGAGAAACGCGAAAAGGGCCAGCAAAGACTCGAC
AGCATGTTTGGAAAGGCTGCAGGCGTAAAACGAAAGGCGGATGAAAATGC
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001249-T1.utr5p1 | KJC3_001249-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001249-T1.utr3p1 | KJC3_001249-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3199058..3200313 + |
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