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KJC3_001262-T1, KJC3_001262-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001262-T1
Unique NameKJC3_001262-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3242398..3245030+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001262-T1 ID=KJC3_001262-T1|Name=KJC3_001262-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2633bp|location=Sequence derived from alignment at ch1:3242398..3245030+ (Aspergillus niger KJC3)
AGCCAGAAGGAACCCGCCACCATGAGAGGTTTGAATCTCTTTCAATTAAT
ACTGGCTCTTCTGCTGTCCATGGTAGCAGCCGAGGATGGGTACGATGGCT
GGCTCCGATATGCTCCCGTGTCCTGCGATCTGCGTTGTCGACAGGCTTTA
CCGTCTCATGTTGTGTTGTTGAACAGCACCAAAGGAAGCCCAATCGAGAC
CGCCGGACGAGAATTGAAAGCGGGATTCCAATCGATTCTTTCGACGAACT
TGACATCTCGTCCATTTCAATGCAATAGCTCCACATCAATTCTGGTGGCT
ACTCTGGATGAGTACCGCCAAAGATGCCGGGACATTAATGTGCCTGAGCT
CGATCCCGATGGCTTCTGGTTACAATCCGAAGGGGACACAGTTCGGATCT
TAGGCAAGGATGCCAGAGGAGCCTTGTACGGAGCATACGAATATCTAGCT
ATGGTGGCACAGCGAAATTTTTCTCGTGTCGCGTATGCCACGAGCCCACA
TGCGCCGATCCGTTGGGTGAATCAATGGGACAACATGGACGGAAGCATTG
AACGAGGATACGGTGGTGCGTCGATATTCTTCAAAGATGGCACGGTGGTG
GAAGACATGGCTCCTGTTGAGCAATATGCTAGACTGCTTGCATCCATCCG
GATAAATGCAATTGTCGTCAATAATGTCAATGCGAACGCGACATTACTGC
TACCCGAGAATATGAAAGGCCTGGGTCGTATAGCAGATGCATGTCGACCA
TACGGCGTTCAAATTGGCATATCGCTGAACTTTGCTTCACCCGAAGACTT
GGGTGGTTTGAATACTTATGATCCACTCGATCCAGGTGTCATTGCATGGT
GGCAGAATATCACTGATAGTCTCTATACCTATGTACCAGACATGGCTGGG
TACCTCGTCAAAGCCGACTCAGAGGGCCAGCCAGGTCCAGATACATACAA
TCGCACACTCTCACAAGGGGCAAATCTGTTCGCTCGTGCCCTGCAACCGT
ATGGGGGTGTGCTTATGTACCGTGCTTTCGTCTATGATGACAACTTGAAC
GAATCAGACTGGAAGGCTGATCGTGCTAAGGCAGCAGTGGAGTATTTCAA
GGACCTGGACGGTCAATTCGAGGAGAACGTCGTGATCCAAATAAAGTACG
GCCCGATCGACTTCCAAGTGCGCGAGCCTACCTCACCACTTTTTGCCAAC
CTCTACCACACCAACACAGCCATAGAGTTGGAGGTTAGTCAGGAGTACCT
GGGGCAGCAATGCCATTTGGTGTACTTACCTCCGCTCTGGAAGACGGTCC
TGGATTTCGACTTACGCGTAGACCACAAGCCATCGATGGTCCGCGATATC
ATATCCGGTCAGCGCTTCAACAGAACGCTCGGAGGCTGGGCAGCTGTCGT
TAATGTGGGCACCAACAGAACATGGCTGGGTAGCCACCTTGCTATGTCCA
ATCTGTACGCTTACGGTCGTTTGGCGTGGAGTCCGACAGACGAATCTGAG
CAGATCCTCGAAGACTGGACTCGCCTCACATTTGGACAAAATCACCATGT
CATTAACACTATCTCCGATATGTCAATGACCTCCTGGCCTGCCTATGAAA
ACTATACCGGCAACCTGGGCATACAGACACTGACAGACATCTTGTATACC
CACTATGGTCCAAATCCAGCTACACAGGATAACAATGGCTGGGGTCAATG
GACACGTGCTGATCATGATTCTGTCGGTATGGATCGCACAATACGGAACG
GCACCGGCTATACCGGTCAATACCCGGAGGAGGTTGCTCGCGTATACGAA
TCACTAGAAAGCACGCCAGATGACCTAGTATTGTGGTTTCACCATGTACC
ATGGACGCACCGTCTGCACTCCGGAGTGACTGTTATCCAGCATTTCTACA
ACGCTCACTATGCGGGCGCAGAAGCTGCACACGGATTCGTCAGACAATGG
GAGTCTTTGGAAGGGCTCATTGACCGGGAGCGATACGAAGCCATGCGGTC
GCGACTGGTCTACCAGGCGGGACACTCCATTGTCTGGCGAGATGCTATCA
ATAATTTCTACTACAACATGACCGGAATCCCAGATGTGGCTGGACGTGTG
GGTCACCATCCGTGGCGCATTGAAGCCGAGAGTATGAGATTAGATGGATA
CCAGACGTATACGGTCAGTCCGTTCGAGGCTGCTTCTAATACTACAGCAA
TTATTACCACTTCTAATTCAACGACTGGGACGGCGAGGACTAGCATCAAG
GCCCCATCAGGAGTATACGACATTGGGGTGAACTACTACGATCTCTATGG
TGGTCAATCGAAGTGGACACTATCTGTGGGTGATAAGGTAGTGGGCCAAT
GGCTTGGGGATATGGAGCATAATTCCCTAGGCCATACACCATCTATATAC
TTAGATGGTCACTCTGCCACTCGGATTACGTTCCATGGGGTTGGCATTCG
GCAGGGTGATCAGCTGAAGATTGTTGGGGAGGCGAATGGGGTCGAGCCCG
CTCCCCTGGATTATATAGTGCTACTGCCCCCAGGCTTAGTTGACTGATAT
CTGTAAGGTTCTATGTACCATGTGATTCAATGTATTCGCAGATGTAACCC
TCACTGAATCTACATATATTTGGTGTTCTTGGC
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Coding sequence (CDS) from alignment at ch1:3242398..3245030+

>KJC3_001262-T1 ID=KJC3_001262-T1|Name=KJC3_001262-T1|organism=Aspergillus niger KJC3|type=CDS|length=2526bp|location=Sequence derived from alignment at ch1:3242398..3245030+ (Aspergillus niger KJC3)
ATGAGAGGTTTGAATCTCTTTCAATTAATACTGGCTCTTCTGCTGTCCAT
GGTAGCAGCCGAGGATGGGTACGATGGCTGGCTCCGATATGCTCCCGTGT
CCTGCGATCTGCGTTGTCGACAGGCTTTACCGTCTCATGTTGTGTTGTTG
AACAGCACCAAAGGAAGCCCAATCGAGACCGCCGGACGAGAATTGAAAGC
GGGATTCCAATCGATTCTTTCGACGAACTTGACATCTCGTCCATTTCAAT
GCAATAGCTCCACATCAATTCTGGTGGCTACTCTGGATGAGTACCGCCAA
AGATGCCGGGACATTAATGTGCCTGAGCTCGATCCCGATGGCTTCTGGTT
ACAATCCGAAGGGGACACAGTTCGGATCTTAGGCAAGGATGCCAGAGGAG
CCTTGTACGGAGCATACGAATATCTAGCTATGGTGGCACAGCGAAATTTT
TCTCGTGTCGCGTATGCCACGAGCCCACATGCGCCGATCCGTTGGGTGAA
TCAATGGGACAACATGGACGGAAGCATTGAACGAGGATACGGTGGTGCGT
CGATATTCTTCAAAGATGGCACGGTGGTGGAAGACATGGCTCCTGTTGAG
CAATATGCTAGACTGCTTGCATCCATCCGGATAAATGCAATTGTCGTCAA
TAATGTCAATGCGAACGCGACATTACTGCTACCCGAGAATATGAAAGGCC
TGGGTCGTATAGCAGATGCATGTCGACCATACGGCGTTCAAATTGGCATA
TCGCTGAACTTTGCTTCACCCGAAGACTTGGGTGGTTTGAATACTTATGA
TCCACTCGATCCAGGTGTCATTGCATGGTGGCAGAATATCACTGATAGTC
TCTATACCTATGTACCAGACATGGCTGGGTACCTCGTCAAAGCCGACTCA
GAGGGCCAGCCAGGTCCAGATACATACAATCGCACACTCTCACAAGGGGC
AAATCTGTTCGCTCGTGCCCTGCAACCGTATGGGGGTGTGCTTATGTACC
GTGCTTTCGTCTATGATGACAACTTGAACGAATCAGACTGGAAGGCTGAT
CGTGCTAAGGCAGCAGTGGAGTATTTCAAGGACCTGGACGGTCAATTCGA
GGAGAACGTCGTGATCCAAATAAAGTACGGCCCGATCGACTTCCAAGTGC
GCGAGCCTACCTCACCACTTTTTGCCAACCTCTACCACACCAACACAGCC
ATAGAGTTGGAGGTTAGTCAGGAGTACCTGGGGCAGCAATGCCATTTGGT
GTACTTACCTCCGCTCTGGAAGACGGTCCTGGATTTCGACTTACGCGTAG
ACCACAAGCCATCGATGGTCCGCGATATCATATCCGGTCAGCGCTTCAAC
AGAACGCTCGGAGGCTGGGCAGCTGTCGTTAATGTGGGCACCAACAGAAC
ATGGCTGGGTAGCCACCTTGCTATGTCCAATCTGTACGCTTACGGTCGTT
TGGCGTGGAGTCCGACAGACGAATCTGAGCAGATCCTCGAAGACTGGACT
CGCCTCACATTTGGACAAAATCACCATGTCATTAACACTATCTCCGATAT
GTCAATGACCTCCTGGCCTGCCTATGAAAACTATACCGGCAACCTGGGCA
TACAGACACTGACAGACATCTTGTATACCCACTATGGTCCAAATCCAGCT
ACACAGGATAACAATGGCTGGGGTCAATGGACACGTGCTGATCATGATTC
TGTCGGTATGGATCGCACAATACGGAACGGCACCGGCTATACCGGTCAAT
ACCCGGAGGAGGTTGCTCGCGTATACGAATCACTAGAAAGCACGCCAGAT
GACCTAGTATTGTGGTTTCACCATGTACCATGGACGCACCGTCTGCACTC
CGGAGTGACTGTTATCCAGCATTTCTACAACGCTCACTATGCGGGCGCAG
AAGCTGCACACGGATTCGTCAGACAATGGGAGTCTTTGGAAGGGCTCATT
GACCGGGAGCGATACGAAGCCATGCGGTCGCGACTGGTCTACCAGGCGGG
ACACTCCATTGTCTGGCGAGATGCTATCAATAATTTCTACTACAACATGA
CCGGAATCCCAGATGTGGCTGGACGTGTGGGTCACCATCCGTGGCGCATT
GAAGCCGAGAGTATGAGATTAGATGGATACCAGACGTATACGGTCAGTCC
GTTCGAGGCTGCTTCTAATACTACAGCAATTATTACCACTTCTAATTCAA
CGACTGGGACGGCGAGGACTAGCATCAAGGCCCCATCAGGAGTATACGAC
ATTGGGGTGAACTACTACGATCTCTATGGTGGTCAATCGAAGTGGACACT
ATCTGTGGGTGATAAGGTAGTGGGCCAATGGCTTGGGGATATGGAGCATA
ATTCCCTAGGCCATACACCATCTATATACTTAGATGGTCACTCTGCCACT
CGGATTACGTTCCATGGGGTTGGCATTCGGCAGGGTGATCAGCTGAAGAT
TGTTGGGGAGGCGAATGGGGTCGAGCCCGCTCCCCTGGATTATATAGTGC
TACTGCCCCCAGGCTTAGTTGACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0046559alpha-glucuronidase activity
Vocabulary: Biological Process
TermDefinition
GO:0045493xylan catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001262KJC3_001262Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001262-T1.utr5p1KJC3_001262-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001262-T1.exon1KJC3_001262-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001262-T1.cdsKJC3_001262-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001262-T1.utr3p1KJC3_001262-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001262-T1KJC3_001262-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH67
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR011100
DBxrefInterPro:IPR037054
DBxrefInterPro:IPR011099
DBxrefInterPro:IPR005154
DBxrefInterPro:IPR029018
DBxrefInterPro:IPR011395
DBxrefPFAM:PF03648
DBxrefPFAM:PF07488
DBxrefPFAM:PF07477
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3242398..3245030 +
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