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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3331475..3333157- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001292-T1 ID=KJC3_001292-T1|Name=KJC3_001292-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1683bp|location=Sequence derived from alignment at ch1:3331475..3333157- (Aspergillus niger KJC3)
CTCTCAGTTCCCATCACTCTCCTCATCCGTACTCTCTCTCAACTCTGTGA
GCCCCATACCATCTTCCGAACAGACTTCGAACGAAAAATACCTATTCTAC
CTTTGACCTTGCGTCACACTGCTCCATACCATAATGACTAGCCCCAAGAA
CCAACAGAAGCGGCTCAAGCGCACTTTTTCGGACAGGGAAGAAGAACCTA
CGTCAGACATGGAGGAGAAAGCTATGCCGGACATGGAGAAGGAATCTACA
CCGGACATATGGACCGAAGGGGGACCAGCTCTGTACCCCACTATACAGTA
CCTCTGTCAGAGAGAGGAGTATAATGAAATTTTTCAACATTTTTGGTCCA
TGTCCTTTATGGCATTACCGCACATGAGGTCTCTACCGGCAGATTTCAAG
AAGGGACTCTTTAAAATCAATCTAGAGGTACACGGTTGGGCTTGGCGCTT
TGGTGAAGACAAACCTATGTCCCATCTCTCCTGTCATGACAAGCAGGCCA
TTATCGCCAGTTTAGATGGATTCTGTGTCCAAGAGGACTGGGACAAGATT
CATTCCTCACTTCCTCCTGCTGCTCGCTCTGTGTTTGGAAAGGTTTTGCT
AGAGGCCATGCTCAATCAGTTCATCTACAAGAAGTTTGCCACCTCTCCCT
TCTGGTTTATGGATGCCAAATTGGATGCTACGGACCAGCCCGGGGATGCC
AACTTCATCAAAAGACTTGACTATATCTACCAGAGGTTCAAAGAAAGTAT
GTCCATCTCAAGCCTCCATTCTCCCCTCTTCCCTCGCTACTGCATATTTT
GGAGTCGCTAACACTTTGCCTTTACATAGTATTGCCCACGAACGCAGCTT
GGTGGAAGTCAACCCTCGTGAGCATCTGCACGGCAGAAGTCCAGTTTGCG
GGTGGTGCCCGCTACTCAGCACTTGGTCAACCCATGCTTGAACATCGCAA
AGCACTCGTGAAGTCCTACGAGGAAGAGCTGTGGGGGTGCCGACTTTTCC
GACTCCTCCTTAAAGACTCACTGAGCCAGTCGCTGCAGACTTTCCGCGAT
GACAGACTCCACTTGATCCTAGAGCTTGCGGCTCAGGAATTTATTGCTGG
CCAAGCTGGTCTCTTTGGCAATCTCGTGGTTGAGCGGCTGCCTGAGCTTG
CAAAGTTTGATCGCCATTCGGACACTATGATACACCATTGGTATCATGCT
GGCTTCGAACCCCAGGACGGTGCTCGAGTTCTTCTCGTGATACGTCCGCG
CTACAGCTACCATGATACCCTTACGGGTATGAGTTGGATACCTGTACCTC
CGGTCCAACTCATTCAGGCGGAAGTCGTGACGGGGCCGGCGGGGCCAGAG
GAGCAGGCTCGATGGGCAGCCGCTGCTGGCGACAATGATCCTACCCAGGA
TGAGAGAATCGACAATGAGGGTGTCGACAACGAAGAAGGTGTAGAAGGAG
AGAGTGAAGGCAAAGACGGACGGAAAGGAGAAAAACAAGGAGAAGACGAC
GACGACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAATGATGATGATGAGAATGATAAC
AATGACGTTGACAACTACGTAGATGATGCATGA back to topCoding sequence (CDS) from alignment at ch1:3331475..3333157- >KJC3_001292-T1 ID=KJC3_001292-T1|Name=KJC3_001292-T1|organism=Aspergillus niger KJC3|type=CDS|length=2934bp|location=Sequence derived from alignment at ch1:3331475..3333157- (Aspergillus niger KJC3)
TATTGCCCACGAACGCAGCTTGGTGGAAGTCAACCCTCGTGAGCATCTGC
ACGGCAGAAGTCCAGTTTGCGGGTGGTGCCCGCTACTCAGCACTTGGTCA
ACCCATGCTTGAACATCGCAAAGCACTCGTGAAGTCCTACGAGGAAGAGC
TGTGGGGGTGCCGACTTTTCCGACTCCTCCTTAAAGACTCACTGAGCCAG
TCGCTGCAGACTTTCCGCGATGACAGACTCCACTTGATCCTAGAGCTTGC
GGCTCAGGAATTTATTGCTGGCCAAGCTGGTCTCTTTGGCAATCTCGTGG
TTGAGCGGCTGCCTGAGCTTGCAAAGTTTGATCGCCATTCGGACACTATG
ATACACCATTGGTATCATGCTGGCTTCGAACCCCAGGACGGTGCTCGAGT
TCTTCTCGTGATACGTCCGCGCTACAGCTACCATGATACCCTTACGGGTA
TGAGTTGGATACCTGTACCTCCGGTCCAACTCATTCAGGCGGAAGTCGTG
ACGGGGCCGGCGGGGCCAGAGGAGCAGGCTCGATGGGCAGCCGCTGCTGG
CGACAATGATCCTACCCAGGATGAGAGAATCGACAATGAGGGTGTCGACA
ACGAAGAAGGTGTAGAAGGAGAGAGTGAAGGCAAAGACGGACGGAAAGGA
GAAAAACAAGGAGAAGACGACGACGACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAT
GATGATGATGAGAATGATAACAATGACGTTGACAACTACGTAGATGATGC
ATGAATGACTAGCCCCAAGAACCAACAGAAGCGGCTCAAGCGCACTTTTT
CGGACAGGGAAGAAGAACCTACGTCAGACATGGAGGAGAAAGCTATGCCG
GACATGGAGAAGGAATCTACACCGGACATATGGACCGAAGGGGGACCAGC
TCTGTACCCCACTATACAGTACCTCTGTCAGAGAGAGGAGTATAATGAAA
TTTTTCAACATTTTTGGTCCATGTCCTTTATGGCATTACCGCACATGAGG
TCTCTACCGGCAGATTTCAAGAAGGGACTCTTTAAAATCAATCTAGAGGT
ACACGGTTGGGCTTGGCGCTTTGGTGAAGACAAACCTATGTCCCATCTCT
CCTGTCATGACAAGCAGGCCATTATCGCCAGTTTAGATGGATTCTGTGTC
CAAGAGGACTGGGACAAGATTCATTCCTCACTTCCTCCTGCTGCTCGCTC
TGTGTTTGGAAAGGTTTTGCTAGAGGCCATGCTCAATCAGTTCATCTACA
AGAAGTTTGCCACCTCTCCCTTCTGGTTTATGGATGCCAAATTGGATGCT
ACGGACCAGCCCGGGGATGCCAACTTCATCAAAAGACTTGACTATATCTA
CCAGAGGTTCAAAGAAATATTGCCCACGAACGCAGCTTGGTGGAAGTCAA
CCCTCGTGAGCATCTGCACGGCAGAAGTCCAGTTTGCGGGTGGTGCCCGC
TACTCAGCACTTGGTCAACCCATGCTTGAACATCGCAAAGCACTCGTGAA
GTCCTACGAGGAAGAGCTGTGGGGGTGCCGACTTTTCCGACTCCTCCTTA
AAGACTCACTGAGCCAGTCGCTGCAGACTTTCCGCGATGACAGACTCCAC
TTGATCCTAGAGCTTGCGGCTCAGGAATTTATTGCTGGCCAAGCTGGTCT
CTTTGGCAATCTCGTGGTTGAGCGGCTGCCTGAGCTTGCAAAGTTTGATC
GCCATTCGGACACTATGATACACCATTGGTATCATGCTGGCTTCGAACCC
CAGGACGGTGCTCGAGTTCTTCTCGTGATACGTCCGCGCTACAGCTACCA
TGATACCCTTACGGGTATGAGTTGGATACCTGTACCTCCGGTCCAACTCA
TTCAGGCGGAAGTCGTGACGGGGCCGGCGGGGCCAGAGGAGCAGGCTCGA
TGGGCAGCCGCTGCTGGCGACAATGATCCTACCCAGGATGAGAGAATCGA
CAATGAGGGTGTCGACAACGAAGAAGGTGTAGAAGGAGAGAGTGAAGGCA
AAGACGGACGGAAAGGAGAAAAACAAGGAGAAGACGACGACGACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAATGATGATGATGAGAATGATAACAATGACGTTGAC
AACTACGTAGATGATGCATGAATGACTAGCCCCAAGAACCAACAGAAGCG
GCTCAAGCGCACTTTTTCGGACAGGGAAGAAGAACCTACGTCAGACATGG
AGGAGAAAGCTATGCCGGACATGGAGAAGGAATCTACACCGGACATATGG
ACCGAAGGGGGACCAGCTCTGTACCCCACTATACAGTACCTCTGTCAGAG
AGAGGAGTATAATGAAATTTTTCAACATTTTTGGTCCATGTCCTTTATGG
CATTACCGCACATGAGGTCTCTACCGGCAGATTTCAAGAAGGGACTCTTT
AAAATCAATCTAGAGGTACACGGTTGGGCTTGGCGCTTTGGTGAAGACAA
ACCTATGTCCCATCTCTCCTGTCATGACAAGCAGGCCATTATCGCCAGTT
TAGATGGATTCTGTGTCCAAGAGGACTGGGACAAGATTCATTCCTCACTT
CCTCCTGCTGCTCGCTCTGTGTTTGGAAAGGTTTTGCTAGAGGCCATGCT
CAATCAGTTCATCTACAAGAAGTTTGCCACCTCTCCCTTCTGGTTTATGG
ATGCCAAATTGGATGCTACGGACCAGCCCGGGGATGCCAACTTCATCAAA
AGACTTGACTATATCTACCAGAGGTTCAAAGAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001292-T1.utr5p1 | KJC3_001292-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3331475..3333157 - |
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