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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3373803..3375768- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001309-T2 ID=KJC3_001309-T2|Name=KJC3_001309-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1966bp|location=Sequence derived from alignment at ch1:3373803..3375768- (Aspergillus niger KJC3)
GGCATCCATAACTATCCGTCGGTCCCTTCGGCCGGCAATCATAATTTAAT
TCCTCGTCTTCCACCGAATCCAAATTTATCGTCCAAGCATGCAACTTTCG
GGAATCTAAGTATCCATCAAAAGTCCTATAATGGCAGAATCACCTTTACT
CCAGGCTCACACAGGGCCGCGAACATCTTGCGATTCGCAAGACCCGGCAG
AGCCATTTCTACCCCGACCCTCGGCCCCCGGGTCCTCAGTGCATCAGAAC
CCAACCCGAATTCTGTTCCGGTTGTATATTTCCCATTTTCTATCAACATG
GAACTCGCGAATGTTCGAGTTTGGGGCCGTCTTGTTCCTGGCGACTATCT
TCCCGGGAACACTGCGGTATACTTCGGTTTATGCTCTGGTTCGATCGCTG
TCTGCGGTGGTCCTGTCATCATGGTTGGGATCGGTGGTGGACCGAGCGAA
TAGGTTGAGAGCGATTCGGCATTCCATTAGTATGTTGGAGTAGCAAGCGC
AGAGGGAGATATGGTTATGGACTGACACCGTCTAGTATGGCAGAGAATCC
CTGTAGCTGCCTCGTGCGCATGCTTTACGGCTCTCCTGACCCCGAGTACA
ACGGCGTTTACCTCGCTCGTGTTCGCGGGTACGGTTTTGCTCGCTTGTGT
GGAGAAGCTCGCTGCTACTGCGAACTGTGTTGCTGTTGAAAGGGATTGGG
TGAGTTGACCGTTCTCCTGCTATGATACCTGGCTAATTCGAAAAGGCCAT
TGTTGTGTCGGATGCCCTAGATATTCCTCGACAAGGTATGCTACGCATTG
CTGCCTGCCATAGTCAGTACTAATTGAGCAGACCTCAATGCGTCTATGAG
ACGGATAGACCTGTTTTGCAAACTCTTAGCTCCGGTGGTCATCTCCGTGG
TTGATGGGCTGTCGACTAAGATAGCCATATGGACGGTCTTGGTTGTAAAT
GTGTCTTGTGTCGTCGTTGAATACATTGCAATTGCTCAGGTATTATCTCC
CCAGGTTGGAGACGTCTGTATGCTTACAAAGTCCAGGTGTATACGTCCAT
TCCTGAACTCAAGCGTTGTCAGGATGAAAGCAGTGAGATCGGAGATGGAC
CTGGGCTTGAGCCGCAAGATGGGGGCAGTGCGCCAACCGCAGCTCGTCGG
ATAGCGCAGTATAGCAGAAAGGCTCTTGCTCCGTGGCGAGAGTACGTGGC
TAGCTCTGTGTTCCTAGCCTCCCTTGCCTTGAGCTTACTTTATCTCACGG
TGCTTTCTTTCGGTACTACCACGGTTACGTACCTGCTACATACTGGGTTC
ACCCCGCTGCAGGTCAGCGGGATGAGAATCGGCGCTGTCATTGCAGAGCT
GTCGGGGACATGGGCGGCACCCTTTATCACGGGAAGGATTGGGCCTATCC
GGTCAGGCCTGTGGTTTTTGAACTGGCAGTTTGCCTGTCTGGCAGCTGCA
GTGGCGGCCTTTGCTTTCCTCGACAACCAGTCTCAAGTGGTGGCTATTAG
CCTGATTGTCGGAGTAGCTCTCAGTCGAATTGGTCTCTGGGGCTTTGATC
TGTCGGTGCAATTCCTAGTCCAAGAGGTAAGTCCTACTGTTCGAACTGAA
TCTAATGATCAAGCTCTTACTATGATAGGGTGTGGACGAACGTGCTCGCG
CGCGGTTCTCATCCACGGAAATGGCTCTCCAAAACATCTTTGAGCTTCTA
TCCTTTGCGACGACCATTGCATTCCCCCTTCCTGAACAATTCAAATACCC
AGTATTCATCAGTTACGGGGGCATTGCGATAGCGGCCATTTGTTTTGCGA
CGTATGTGCGGAAGGAACGGGGACATTTGCTGCATACATCCAAATGTTTT
GGGGGAGACAAGAAGCGGATCGTCCCTGACCCGCAGGATGTCCTCATCCG
GCGCGCATAATGAGATAGAATGCATGTAGTGCCATGAGATATGAATCAAA
AATGCTATCTGACGTA back to topCoding sequence (CDS) from alignment at ch1:3373803..3375768- >KJC3_001309-T2 ID=KJC3_001309-T2|Name=KJC3_001309-T2|organism=Aspergillus niger KJC3|type=CDS|length=6840bp|location=Sequence derived from alignment at ch1:3373803..3375768- (Aspergillus niger KJC3)
GTGTATACGTCCATTCCTGAACTCAAGCGTTGTCAGGATGAAAGCAGTGA
GATCGGAGATGGACCTGGGCTTGAGCCGCAAGATGGGGGCAGTGCGCCAA
CCGCAGCTCGTCGGATAGCGCAGTATAGCAGAAAGGCTCTTGCTCCGTGG
CGAGAGTACGTGGCTAGCTCTGTGTTCCTAGCCTCCCTTGCCTTGAGCTT
ACTTTATCTCACGGTGCTTTCTTTCGGTACTACCACGGTTACGTACCTGC
TACATACTGGGTTCACCCCGCTGCAGGTCAGCGGGATGAGAATCGGCGCT
GTCATTGCAGAGCTGTCGGGGACATGGGCGGCACCCTTTATCACGGGAAG
GATTGGGCCTATCCGGTCAGGCCTGTGGTTTTTGAACTGGCAGTTTGCCT
GTCTGGCAGCTGCAGTGGCGGCCTTTGCTTTCCTCGACAACCAGTCTCAA
GTGGTGGCTATTAGCCTGATTGTCGGAGTAGCTCTCAGTCGAATTGGTCT
CTGGGGCTTTGATCTGTCGGTGCAATTCCTAGTCCAAGAGGTAAGTCCTA
CTGTTCGAACTGAATCTAATGATCAAGCTCTTACTATGATAGGGTGTGGA
CGAACGTGCTCGCGCGCGGTTCTCATCCACGGAAATGGCTCTCCAAAACA
TCTTTGAACCTCAATGCGTCTATGAGACGGATAGACCTGTTTTGCAAACT
CTTAGCTCCGGTGGTCATCTCCGTGGTTGATGGGCTGTCGACTAAGATAG
CCATATGGACGGTCTTGGTTGTAAATGTGTCTTGTGTCGTCGTTGAATAC
ATTGCAATTGCTCAGGCCATTGTTGTGTCGGATGCCCTAGATATTCCTCG
ACAAGTATGGCAGAGAATCCCTGTAGCTGCCTCGTGCGCATGCTTTACGG
CTCTCCTGACCCCGAGTACAACGGCGTTTACCTCGCTCGTGTTCGCGGGT
ACGGTTTTGCTCGCTTGTGTGGAGAAGCTCGCTGCTACTGCGAACTGTGT
TGCTGTTGAAAGGGATTGGATGGCAGAATCACCTTTACTCCAGGCTCACA
CAGGGCCGCGAACATCTTGCGATTCGCAAGACCCGGCAGAGCCATTTCTA
CCCCGACCCTCGGCCCCCGGGTCCTCAGTGCATCAGAACCCAACCCGAAT
TCTGTTCCGGTTGTATATTTCCCATTTTCTATCAACATGGAACTCGCGAA
TGTTCGAGTTTGGGGCCGTCTTGTTCCTGGCGACTATCTTCCCGGGAACA
CTGCGGTATACTTCGGTTTATGCTCTGGTTCGATCGCTGTCTGCGGTGGT
CCTGTCATCATGGTTGGGATCGGTGGTGGACCGAGCGAATAGGTTGAGAG
CGATTCGGCATTCCATTAGTGTATACGTCCATTCCTGAACTCAAGCGTTG
TCAGGATGAAAGCAGTGAGATCGGAGATGGACCTGGGCTTGAGCCGCAAG
ATGGGGGCAGTGCGCCAACCGCAGCTCGTCGGATAGCGCAGTATAGCAGA
AAGGCTCTTGCTCCGTGGCGAGAGTACGTGGCTAGCTCTGTGTTCCTAGC
CTCCCTTGCCTTGAGCTTACTTTATCTCACGGTGCTTTCTTTCGGTACTA
CCACGGTTACGTACCTGCTACATACTGGGTTCACCCCGCTGCAGGTCAGC
GGGATGAGAATCGGCGCTGTCATTGCAGAGCTGTCGGGGACATGGGCGGC
ACCCTTTATCACGGGAAGGATTGGGCCTATCCGGTCAGGCCTGTGGTTTT
TGAACTGGCAGTTTGCCTGTCTGGCAGCTGCAGTGGCGGCCTTTGCTTTC
CTCGACAACCAGTCTCAAGTGGTGGCTATTAGCCTGATTGTCGGAGTAGC
TCTCAGTCGAATTGGTCTCTGGGGCTTTGATCTGTCGGTGCAATTCCTAG
TCCAAGAGGTAAGTCCTACTGTTCGAACTGAATCTAATGATCAAGCTCTT
ACTATGATAGGGTGTGGACGAACGTGCTCGCGCGCGGTTCTCATCCACGG
AAATGGCTCTCCAAAACATCTTTGAACCTCAATGCGTCTATGAGACGGAT
AGACCTGTTTTGCAAACTCTTAGCTCCGGTGGTCATCTCCGTGGTTGATG
GGCTGTCGACTAAGATAGCCATATGGACGGTCTTGGTTGTAAATGTGTCT
TGTGTCGTCGTTGAATACATTGCAATTGCTCAGGCCATTGTTGTGTCGGA
TGCCCTAGATATTCCTCGACAAGTATGGCAGAGAATCCCTGTAGCTGCCT
CGTGCGCATGCTTTACGGCTCTCCTGACCCCGAGTACAACGGCGTTTACC
TCGCTCGTGTTCGCGGGTACGGTTTTGCTCGCTTGTGTGGAGAAGCTCGC
TGCTACTGCGAACTGTGTTGCTGTTGAAAGGGATTGGATGGCAGAATCAC
CTTTACTCCAGGCTCACACAGGGCCGCGAACATCTTGCGATTCGCAAGAC
CCGGCAGAGCCATTTCTACCCCGACCCTCGGCCCCCGGGTCCTCAGTGCA
TCAGAACCCAACCCGAATTCTGTTCCGGTTGTATATTTCCCATTTTCTAT
CAACATGGAACTCGCGAATGTTCGAGTTTGGGGCCGTCTTGTTCCTGGCG
ACTATCTTCCCGGGAACACTGCGGTATACTTCGGTTTATGCTCTGGTTCG
ATCGCTGTCTGCGGTGGTCCTGTCATCATGGTTGGGATCGGTGGTGGACC
GAGCGAATAGGTTGAGAGCGATTCGGCATTCCATTAGTGTATACGTCCAT
TCCTGAACTCAAGCGTTGTCAGGATGAAAGCAGTGAGATCGGAGATGGAC
CTGGGCTTGAGCCGCAAGATGGGGGCAGTGCGCCAACCGCAGCTCGTCGG
ATAGCGCAGTATAGCAGAAAGGCTCTTGCTCCGTGGCGAGAGTACGTGGC
TAGCTCTGTGTTCCTAGCCTCCCTTGCCTTGAGCTTACTTTATCTCACGG
TGCTTTCTTTCGGTACTACCACGGTTACGTACCTGCTACATACTGGGTTC
ACCCCGCTGCAGGTCAGCGGGATGAGAATCGGCGCTGTCATTGCAGAGCT
GTCGGGGACATGGGCGGCACCCTTTATCACGGGAAGGATTGGGCCTATCC
GGTCAGGCCTGTGGTTTTTGAACTGGCAGTTTGCCTGTCTGGCAGCTGCA
GTGGCGGCCTTTGCTTTCCTCGACAACCAGTCTCAAGTGGTGGCTATTAG
CCTGATTGTCGGAGTAGCTCTCAGTCGAATTGGTCTCTGGGGCTTTGATC
TGTCGGTGCAATTCCTAGTCCAAGAGGTAAGTCCTACTGTTCGAACTGAA
TCTAATGATCAAGCTCTTACTATGATAGGGTGTGGACGAACGTGCTCGCG
CGCGGTTCTCATCCACGGAAATGGCTCTCCAAAACATCTTTGAACCTCAA
TGCGTCTATGAGACGGATAGACCTGTTTTGCAAACTCTTAGCTCCGGTGG
TCATCTCCGTGGTTGATGGGCTGTCGACTAAGATAGCCATATGGACGGTC
TTGGTTGTAAATGTGTCTTGTGTCGTCGTTGAATACATTGCAATTGCTCA
GGCCATTGTTGTGTCGGATGCCCTAGATATTCCTCGACAAGTATGGCAGA
GAATCCCTGTAGCTGCCTCGTGCGCATGCTTTACGGCTCTCCTGACCCCG
AGTACAACGGCGTTTACCTCGCTCGTGTTCGCGGGTACGGTTTTGCTCGC
TTGTGTGGAGAAGCTCGCTGCTACTGCGAACTGTGTTGCTGTTGAAAGGG
ATTGGATGGCAGAATCACCTTTACTCCAGGCTCACACAGGGCCGCGAACA
TCTTGCGATTCGCAAGACCCGGCAGAGCCATTTCTACCCCGACCCTCGGC
CCCCGGGTCCTCAGTGCATCAGAACCCAACCCGAATTCTGTTCCGGTTGT
ATATTTCCCATTTTCTATCAACATGGAACTCGCGAATGTTCGAGTTTGGG
GCCGTCTTGTTCCTGGCGACTATCTTCCCGGGAACACTGCGGTATACTTC
GGTTTATGCTCTGGTTCGATCGCTGTCTGCGGTGGTCCTGTCATCATGGT
TGGGATCGGTGGTGGACCGAGCGAATAGGTTGAGAGCGATTCGGCATTCC
ATTAGTGTATACGTCCATTCCTGAACTCAAGCGTTGTCAGGATGAAAGCA
GTGAGATCGGAGATGGACCTGGGCTTGAGCCGCAAGATGGGGGCAGTGCG
CCAACCGCAGCTCGTCGGATAGCGCAGTATAGCAGAAAGGCTCTTGCTCC
GTGGCGAGAGTACGTGGCTAGCTCTGTGTTCCTAGCCTCCCTTGCCTTGA
GCTTACTTTATCTCACGGTGCTTTCTTTCGGTACTACCACGGTTACGTAC
CTGCTACATACTGGGTTCACCCCGCTGCAGGTCAGCGGGATGAGAATCGG
CGCTGTCATTGCAGAGCTGTCGGGGACATGGGCGGCACCCTTTATCACGG
GAAGGATTGGGCCTATCCGGTCAGGCCTGTGGTTTTTGAACTGGCAGTTT
GCCTGTCTGGCAGCTGCAGTGGCGGCCTTTGCTTTCCTCGACAACCAGTC
TCAAGTGGTGGCTATTAGCCTGATTGTCGGAGTAGCTCTCAGTCGAATTG
GTCTCTGGGGCTTTGATCTGTCGGTGCAATTCCTAGTCCAAGAGGTAAGT
CCTACTGTTCGAACTGAATCTAATGATCAAGCTCTTACTATGATAGGGTG
TGGACGAACGTGCTCGCGCGCGGTTCTCATCCACGGAAATGGCTCTCCAA
AACATCTTTGAACCTCAATGCGTCTATGAGACGGATAGACCTGTTTTGCA
AACTCTTAGCTCCGGTGGTCATCTCCGTGGTTGATGGGCTGTCGACTAAG
ATAGCCATATGGACGGTCTTGGTTGTAAATGTGTCTTGTGTCGTCGTTGA
ATACATTGCAATTGCTCAGGCCATTGTTGTGTCGGATGCCCTAGATATTC
CTCGACAAGTATGGCAGAGAATCCCTGTAGCTGCCTCGTGCGCATGCTTT
ACGGCTCTCCTGACCCCGAGTACAACGGCGTTTACCTCGCTCGTGTTCGC
GGGTACGGTTTTGCTCGCTTGTGTGGAGAAGCTCGCTGCTACTGCGAACT
GTGTTGCTGTTGAAAGGGATTGGATGGCAGAATCACCTTTACTCCAGGCT
CACACAGGGCCGCGAACATCTTGCGATTCGCAAGACCCGGCAGAGCCATT
TCTACCCCGACCCTCGGCCCCCGGGTCCTCAGTGCATCAGAACCCAACCC
GAATTCTGTTCCGGTTGTATATTTCCCATTTTCTATCAACATGGAACTCG
CGAATGTTCGAGTTTGGGGCCGTCTTGTTCCTGGCGACTATCTTCCCGGG
AACACTGCGGTATACTTCGGTTTATGCTCTGGTTCGATCGCTGTCTGCGG
TGGTCCTGTCATCATGGTTGGGATCGGTGGTGGACCGAGCGAATAGGTTG
AGAGCGATTCGGCATTCCATTAGTGTATACGTCCATTCCTGAACTCAAGC
GTTGTCAGGATGAAAGCAGTGAGATCGGAGATGGACCTGGGCTTGAGCCG
CAAGATGGGGGCAGTGCGCCAACCGCAGCTCGTCGGATAGCGCAGTATAG
CAGAAAGGCTCTTGCTCCGTGGCGAGAGTACGTGGCTAGCTCTGTGTTCC
TAGCCTCCCTTGCCTTGAGCTTACTTTATCTCACGGTGCTTTCTTTCGGT
ACTACCACGGTTACGTACCTGCTACATACTGGGTTCACCCCGCTGCAGGT
CAGCGGGATGAGAATCGGCGCTGTCATTGCAGAGCTGTCGGGGACATGGG
CGGCACCCTTTATCACGGGAAGGATTGGGCCTATCCGGTCAGGCCTGTGG
TTTTTGAACTGGCAGTTTGCCTGTCTGGCAGCTGCAGTGGCGGCCTTTGC
TTTCCTCGACAACCAGTCTCAAGTGGTGGCTATTAGCCTGATTGTCGGAG
TAGCTCTCAGTCGAATTGGTCTCTGGGGCTTTGATCTGTCGGTGCAATTC
CTAGTCCAAGAGGTAAGTCCTACTGTTCGAACTGAATCTAATGATCAAGC
TCTTACTATGATAGGGTGTGGACGAACGTGCTCGCGCGCGGTTCTCATCC
ACGGAAATGGCTCTCCAAAACATCTTTGAACCTCAATGCGTCTATGAGAC
GGATAGACCTGTTTTGCAAACTCTTAGCTCCGGTGGTCATCTCCGTGGTT
GATGGGCTGTCGACTAAGATAGCCATATGGACGGTCTTGGTTGTAAATGT
GTCTTGTGTCGTCGTTGAATACATTGCAATTGCTCAGGCCATTGTTGTGT
CGGATGCCCTAGATATTCCTCGACAAGTATGGCAGAGAATCCCTGTAGCT
GCCTCGTGCGCATGCTTTACGGCTCTCCTGACCCCGAGTACAACGGCGTT
TACCTCGCTCGTGTTCGCGGGTACGGTTTTGCTCGCTTGTGTGGAGAAGC
TCGCTGCTACTGCGAACTGTGTTGCTGTTGAAAGGGATTGGATGGCAGAA
TCACCTTTACTCCAGGCTCACACAGGGCCGCGAACATCTTGCGATTCGCA
AGACCCGGCAGAGCCATTTCTACCCCGACCCTCGGCCCCCGGGTCCTCAG
TGCATCAGAACCCAACCCGAATTCTGTTCCGGTTGTATATTTCCCATTTT
CTATCAACATGGAACTCGCGAATGTTCGAGTTTGGGGCCGTCTTGTTCCT
GGCGACTATCTTCCCGGGAACACTGCGGTATACTTCGGTTTATGCTCTGG
TTCGATCGCTGTCTGCGGTGGTCCTGTCATCATGGTTGGGATCGGTGGTG
GACCGAGCGAATAGGTTGAGAGCGATTCGGCATTCCATTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0034755 | iron ion transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005381 | iron ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001309-T2.utr3p1 | KJC3_001309-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001309-T2.utr5p1 | KJC3_001309-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR009716 |
| DBxref | PFAM:PF06963 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3373803..3375768 - |
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